This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
ASP 1
VAL 2
0.0047
VAL 2
GLU 3
-0.0523
GLU 3
PHE 4
-0.2833
PHE 4
LYS 5
0.0038
LYS 5
CYS 6
0.0790
CYS 6
THR 7
0.0235
THR 7
CYS 8
0.0532
CYS 8
SER 9
0.0301
SER 9
ARG 10
0.0604
ARG 10
GLU 11
-0.0035
GLU 11
ARG 12
-0.0194
ARG 12
CYS 13
0.0223
CYS 13
ALA 14
0.0003
ALA 14
ASP 15
-0.0212
ASP 15
ALA 16
0.0067
ALA 16
LEU 17
0.0260
LEU 17
LYS 18
-0.0542
LYS 18
THR 19
-0.0193
THR 19
LEU 20
0.0085
LEU 20
PRO 21
-0.0167
PRO 21
ASP 22
-0.0055
ASP 22
GLU 23
-0.0039
GLU 23
GLU 24
-0.0028
GLU 24
VAL 25
-0.0018
VAL 25
ASP 26
0.0119
ASP 26
SER 27
-0.0101
SER 27
ILE 28
-0.0181
ILE 28
LEU 29
0.0203
LEU 29
ALA 30
0.0061
ALA 30
GLU 31
-0.0006
GLU 31
ASP 32
-0.0042
ASP 32
GLY 33
0.0140
GLY 33
GLU 34
-0.0101
GLU 34
ILE 35
0.0007
ILE 35
ASP 36
-0.0741
ASP 36
MET 37
0.0031
MET 37
HIS 38
-0.1252
HIS 38
CYS 39
-0.0117
CYS 39
ASP 40
-0.0003
ASP 40
TYR 41
-0.0977
TYR 41
CYS 42
0.0947
CYS 42
GLY 43
-0.0523
GLY 43
ASN 44
0.0201
ASN 44
HIS 45
0.0317
HIS 45
TYR 46
0.0312
TYR 46
LEU 47
0.0209
LEU 47
PHE 48
0.0258
PHE 48
ASN 49
-0.0054
ASN 49
ALA 50
-0.0084
ALA 50
MET 51
0.0178
MET 51
ASP 52
0.0008
ASP 52
ILE 53
0.0155
ILE 53
ALA 54
-0.0024
ALA 54
GLU 55
-0.0046
GLU 55
ILE 56
-0.0254
ILE 56
ARG 57
0.0155
ARG 57
ASN 58
-0.0472
ASN 58
ASN 59
-0.0488
ASN 59
ALA 60
-0.0180
ALA 60
SER 61
0.0043
SER 61
PRO 62
-0.0326
PRO 62
ALA 63
-0.0318
ALA 63
ASP 64
-0.0813
ASP 64
PRO 65
0.1601
PRO 65
GLN 66
0.0314
GLN 66
VAL 67
0.0466
VAL 67
HIS 68
-0.0124
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.