This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
ASP 1
VAL 2
0.0016
VAL 2
GLU 3
-0.0066
GLU 3
PHE 4
0.0003
PHE 4
LYS 5
-0.0104
LYS 5
CYS 6
0.0059
CYS 6
THR 7
0.0009
THR 7
CYS 8
-0.0007
CYS 8
SER 9
-0.0011
SER 9
ARG 10
-0.0074
ARG 10
GLU 11
0.0016
GLU 11
ARG 12
0.0011
ARG 12
CYS 13
0.0009
CYS 13
ALA 14
0.0047
ALA 14
ASP 15
-0.0038
ASP 15
ALA 16
-0.0015
ALA 16
LEU 17
-0.0011
LEU 17
LYS 18
0.0054
LYS 18
THR 19
-0.0005
THR 19
LEU 20
0.0005
LEU 20
PRO 21
-0.0004
PRO 21
ASP 22
0.0017
ASP 22
GLU 23
0.0009
GLU 23
GLU 24
0.0001
GLU 24
VAL 25
-0.0000
VAL 25
ASP 26
0.0006
ASP 26
SER 27
-0.0011
SER 27
ILE 28
-0.0000
ILE 28
LEU 29
0.0014
LEU 29
ALA 30
0.0006
ALA 30
GLU 31
-0.0003
GLU 31
ASP 32
-0.0001
ASP 32
GLY 33
0.0006
GLY 33
GLU 34
-0.0007
GLU 34
ILE 35
0.0013
ILE 35
ASP 36
-0.0014
ASP 36
MET 37
0.0011
MET 37
HIS 38
0.0054
HIS 38
CYS 39
0.0023
CYS 39
ASP 40
-0.0015
ASP 40
TYR 41
0.0055
TYR 41
CYS 42
-0.0065
CYS 42
GLY 43
-0.0042
GLY 43
ASN 44
0.0015
ASN 44
HIS 45
-0.0082
HIS 45
TYR 46
-0.0002
TYR 46
LEU 47
-0.0055
LEU 47
PHE 48
-0.0027
PHE 48
ASN 49
0.0009
ASN 49
ALA 50
-0.0030
ALA 50
MET 51
0.0079
MET 51
ASP 52
-0.0052
ASP 52
ILE 53
0.0002
ILE 53
ALA 54
-0.0031
ALA 54
GLU 55
0.0130
GLU 55
ILE 56
-0.0079
ILE 56
ARG 57
-0.0106
ARG 57
ASN 58
0.0226
ASN 58
ASN 59
-0.0158
ASN 59
ALA 60
0.0256
ALA 60
SER 61
-0.0002
SER 61
PRO 62
-0.1454
PRO 62
ALA 63
-0.0014
ALA 63
ASP 64
-0.0003
ASP 64
PRO 65
-0.0025
PRO 65
GLN 66
-0.0117
GLN 66
VAL 67
0.0040
VAL 67
HIS 68
-0.0031
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.