CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  Bpti  ***

Normal Mode Analysis for ID 251227075224456254

The following table indicates for every normal mode its frequency (black, normalized relative to the lowest mode frequency) and its collectivity (magenta). If a second structure was submitted, the cummulative overlap between the normal modes and the conformational change is computed (red). The corresponding amplitude (dq) is then also given (green). Click on the mode link to obtain a visualization of the mean square displacement <R2> of the C-alpha atoms associated to each mode.

[HELP on collectivity] [HELP on overlap]

<R2> frequency collectivity
mode 7 1.00 0.2361
mode 8 1.15 0.3806
mode 9 1.28 0.1636
mode 10 1.43 0.3874
mode 11 1.49 0.1429
mode 12 1.58 0.0934
mode 13 1.75 0.2708
mode 14 1.90 0.0873
mode 15 1.92 0.2397
mode 16 2.03 0.2551
mode 17 2.12 0.2285
mode 18 2.20 0.2768
mode 19 2.24 0.4779
mode 20 2.38 0.3028
mode 21 2.42 0.3770
mode 22 2.49 0.4825
mode 23 2.53 0.4424
mode 24 2.57 0.4102
mode 25 2.72 0.5289
mode 26 2.74 0.4826
mode 27 2.89 0.2254
mode 28 2.93 0.3830
mode 29 2.98 0.3553
mode 30 3.04 0.2463
mode 31 3.07 0.4544
mode 32 3.13 0.3233
mode 33 3.17 0.2700
mode 34 3.26 0.2422
mode 35 3.29 0.2276
mode 36 3.30 0.4419
mode 37 3.35 0.2764
mode 38 3.37 0.5908
mode 39 3.44 0.6332
mode 40 3.47 0.5184
mode 41 3.52 0.0446
mode 42 3.58 0.5434
mode 43 3.63 0.3723
mode 44 3.67 0.4631
mode 45 3.68 0.4851
mode 46 3.73 0.4522
mode 47 3.76 0.4787
mode 48 3.81 0.4867
mode 49 3.81 0.3137
mode 50 3.84 0.2365
mode 51 3.90 0.3526
mode 52 3.93 0.4324
mode 53 3.95 0.3653
mode 54 3.99 0.3702
mode 55 4.02 0.4041
mode 56 4.07 0.2775
mode 57 4.11 0.3387
mode 58 4.14 0.5171
mode 59 4.15 0.5364
mode 60 4.21 0.4707
mode 61 4.24 0.4387
mode 62 4.26 0.3889
mode 63 4.29 0.4912
mode 64 4.30 0.4552
mode 65 4.34 0.3363
mode 66 4.35 0.3840
mode 67 4.39 0.4309
mode 68 4.40 0.4799
mode 69 4.44 0.4688
mode 70 4.48 0.4148
mode 71 4.50 0.4295
mode 72 4.52 0.4348
mode 73 4.53 0.3487
mode 74 4.56 0.3557
mode 75 4.57 0.2322
mode 76 4.60 0.4578
mode 77 4.62 0.3332
mode 78 4.65 0.4155
mode 79 4.69 0.3671
mode 80 4.70 0.3679
mode 81 4.72 0.4226
mode 82 4.74 0.2279
mode 83 4.75 0.3925
mode 84 4.77 0.4442
mode 85 4.77 0.3938
mode 86 4.80 0.3038
mode 87 4.81 0.4058
mode 88 4.83 0.4167
mode 89 4.83 0.4306
mode 90 4.87 0.3920
mode 91 4.89 0.4540
mode 92 4.90 0.3455
mode 93 4.91 0.3800
mode 94 4.95 0.4911
mode 95 4.96 0.4032
mode 96 4.97 0.3654
mode 97 4.98 0.5119
mode 98 5.01 0.4509
mode 99 5.03 0.4066
mode 100 5.04 0.4452
mode 101 5.07 0.4173
mode 102 5.08 0.4782
mode 103 5.11 0.5305
mode 104 5.14 0.4097
mode 105 5.15 0.4857
mode 106 5.16 0.4344

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.