CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  Ecoli yecd  ***

<R2> analysis for 251228182821571726

---  normal mode 13  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0434
MET 120.0401
LEU 130.0342
GLU 140.0349
LEU 150.0306
ASN 160.0323
ALA 170.0285
LYS 180.0306
THR 190.0248
THR 200.0199
ALA 210.0154
LEU 220.0108
VAL 230.0064
VAL 240.0019
ILE 250.0019
ASP 260.0073
LEU 270.0085
GLN 280.0156
GLU 290.0208
GLY 300.0225
ILE 310.0185
LEU 320.0184
PRO 330.0235
PHE 340.0218
ALA 350.0201
GLY 360.0232
GLY 370.0229
PRO 380.0240
HIS 390.0215
THR 400.0229
ALA 410.0186
ASP 420.0182
GLU 430.0176
VAL 440.0126
VAL 450.0093
ASN 460.0095
ARG 470.0101
ALA 480.0049
GLY 490.0019
LYS 500.0084
LEU 510.0113
ALA 520.0098
ALA 530.0128
LYS 540.0182
PHE 550.0189
ARG 560.0205
ALA 570.0248
SER 580.0284
GLY 590.0291
GLN 600.0216
PRO 610.0177
VAL 620.0130
PHE 630.0100
LEU 640.0078
VAL 650.0068
ARG 660.0099
VAL 670.0113
GLY 680.0132
TRP 690.0127
SER 700.0155
ALA 710.0162
ASP 720.0100
TYR 730.0078
ALA 740.0079
GLU 750.0078
ALA 760.0049
LEU 770.0014
LYS 780.0053
GLN 790.0113
PRO 800.0142
VAL 810.0135
ASP 820.0155
ALA 830.0142
PRO 840.0111
SER 850.0103
PRO 860.0117
ALA 870.0091
LYS 880.0156
VAL 890.0195
LEU 900.0241
PRO 910.0325
GLU 920.0360
ASN 930.0319
TRP 940.0260
TRP 950.0228
GLN 960.0225
HIS 970.0163
PRO 980.0155
ALA 990.0146
ALA 1000.0080
LEU 1010.0056
GLY 1020.0094
THR 1030.0141
THR 1040.0207
ASP 1050.0270
SER 1060.0259
ASP 1070.0173
ILE 1080.0145
GLU 1090.0128
ILE 1100.0105
ILE 1110.0114
LYS 1120.0064
ARG 1130.0056
GLN 1140.0028
TRP 1150.0016
GLY 1160.0009
ALA 1170.0026
PHE 1180.0038
TYR 1190.0033
GLY 1200.0061
THR 1210.0064
ASP 1220.0076
LEU 1230.0066
GLU 1240.0070
LEU 1250.0081
GLN 1260.0091
LEU 1270.0090
ARG 1280.0090
ARG 1290.0106
ARG 1300.0118
GLY 1310.0119
ILE 1320.0154
ASP 1330.0149
THR 1340.0138
ILE 1350.0106
VAL 1360.0121
LEU 1370.0077
CYS 1380.0061
GLY 1390.0057
ILE 1400.0089
SER 1410.0079
THR 1420.0080
ASN 1430.0065
ILE 1440.0030
GLY 1450.0022
VAL 1460.0030
GLU 1470.0035
SER 1480.0023
THR 1490.0024
ALA 1500.0032
ARG 1510.0036
ASN 1520.0035
ALA 1530.0054
TRP 1540.0053
GLU 1550.0037
LEU 1560.0055
GLY 1570.0082
PHE 1580.0097
ASN 1590.0120
LEU 1600.0124
VAL 1610.0138
ILE 1620.0119
ALA 1630.0126
GLU 1640.0161
ASP 1650.0168
ALA 1660.0116
CYS 1670.0117
SER 1680.0150
ALA 1690.0141
ALA 1700.0164
SER 1710.0189
ALA 1720.0185
GLU 1730.0168
GLN 1740.0119
HIS 1750.0128
ASN 1760.0138
ASN 1770.0113
SER 1780.0096
ILE 1790.0124
ASN 1800.0114
HIS 1810.0106
ILE 1820.0090
TYR 1830.0087
PRO 1840.0114
ARG 1850.0092
ILE 1860.0084
ALA 1870.0107
ARG 1880.0183
VAL 1890.0185
ARG 1900.0209
SER 1910.0213
VAL 1920.0191
GLU 1930.0251
GLU 1940.0286
ILE 1950.0236
LEU 1960.0233
ASN 1970.0301
ALA 1980.0316
LEU 1990.0288
LEU 150.0304
ASN 160.0315
ALA 170.0279
LYS 180.0304
THR 190.0235
THR 200.0194
ALA 210.0152
LEU 220.0113
VAL 230.0067
VAL 240.0022
ILE 250.0029
ASP 260.0077
LEU 270.0096
GLN 280.0161
GLU 290.0224
GLY 300.0249
ILE 310.0200
LEU 320.0201
PRO 330.0255
PHE 340.0240
ALA 350.0214
GLY 360.0264
GLY 370.0253
PRO 380.0260
HIS 390.0242
THR 400.0242
ALA 410.0196
ASP 420.0191
GLU 430.0187
VAL 440.0139
VAL 450.0094
ASN 460.0099
ARG 470.0123
ALA 480.0071
GLY 490.0048
LYS 500.0116
LEU 510.0145
ALA 520.0126
ALA 530.0156
LYS 540.0214
PHE 550.0213
ARG 560.0227
ALA 570.0277
SER 580.0314
GLY 590.0276
GLN 600.0229
PRO 610.0187
VAL 620.0137
PHE 630.0103
LEU 640.0079
VAL 650.0077
ARG 660.0114
VAL 670.0125
GLY 680.0142
TRP 690.0144
SER 700.0178
ALA 710.0173
ASP 720.0128
TYR 730.0104
ALA 740.0093
GLU 750.0074
ALA 760.0040
LEU 770.0011
LYS 780.0032
GLN 790.0121
PRO 800.0141
VAL 810.0134
ASP 820.0155
ALA 830.0146
PRO 840.0096
SER 850.0112
PRO 860.0136
ALA 870.0141
LYS 880.0184
VAL 890.0213
LEU 900.0275
PRO 910.0409
GLU 920.0434
ASN 930.0367
TRP 940.0292
TRP 950.0230
GLN 960.0235
HIS 970.0165
PRO 980.0172
ALA 990.0145
ALA 1000.0083
LEU 1010.0049
GLY 1020.0083
THR 1030.0124
THR 1040.0201
ASP 1050.0273
SER 1060.0273
ASP 1070.0165
ILE 1080.0164
GLU 1090.0142
ILE 1100.0112
ILE 1110.0114
LYS 1120.0075
ARG 1130.0065
GLN 1140.0033
TRP 1150.0004
GLY 1160.0018
ALA 1170.0026
PHE 1180.0046
TYR 1190.0040
GLY 1200.0050
THR 1210.0066
ASP 1220.0090
LEU 1230.0074
GLU 1240.0072
LEU 1250.0081
GLN 1260.0094
LEU 1270.0101
ARG 1280.0092
ARG 1290.0105
ARG 1300.0123
GLY 1310.0184
ILE 1320.0158
ASP 1330.0155
THR 1340.0142
ILE 1350.0127
VAL 1360.0121
LEU 1370.0081
CYS 1380.0070
GLY 1390.0073
ILE 1400.0099
SER 1410.0100
THR 1420.0096
ASN 1430.0045
ILE 1440.0034
GLY 1450.0030
VAL 1460.0032
GLU 1470.0035
SER 1480.0029
THR 1490.0032
ALA 1500.0043
ARG 1510.0043
ASN 1520.0042
ALA 1530.0050
TRP 1540.0050
GLU 1550.0039
LEU 1560.0053
GLY 1570.0071
PHE 1580.0083
ASN 1590.0146
LEU 1600.0124
VAL 1610.0138
ILE 1620.0122
ALA 1630.0153
GLU 1640.0181
ASP 1650.0191
ALA 1660.0135
CYS 1670.0132
SER 1680.0162
ALA 1690.0161
ALA 1700.0199
SER 1710.0186
ALA 1720.0204
GLU 1730.0171
GLN 1740.0114
HIS 1750.0135
ASN 1760.0144
ASN 1770.0102
SER 1780.0091
ILE 1790.0119
ASN 1800.0115
HIS 1810.0090
ILE 1820.0080
TYR 1830.0091
PRO 1840.0109
ARG 1850.0091
ILE 1860.0082
ALA 1870.0127
ARG 1880.0171
VAL 1890.0174
ARG 1900.0200
SER 1910.0259
VAL 1920.0216
GLU 1930.0284
GLU 1940.0313
ILE 1950.0260
LEU 1960.0267
ASN 1970.0341
ALA 1980.0341
LEU 1990.0311
LEU 130.0153
GLU 140.0166
LEU 150.0157
ASN 160.0167
ALA 170.0162
LYS 180.0164
THR 190.0134
THR 200.0117
ALA 210.0101
LEU 220.0084
VAL 230.0063
VAL 240.0048
ILE 250.0029
ASP 260.0030
LEU 270.0029
GLN 280.0050
GLU 290.0072
GLY 300.0081
ILE 310.0060
LEU 320.0060
PRO 330.0073
PHE 340.0067
ALA 350.0060
GLY 360.0083
GLY 370.0075
PRO 380.0083
HIS 390.0070
THR 400.0067
ALA 410.0049
ASP 420.0048
GLU 430.0054
VAL 440.0039
VAL 450.0027
ASN 460.0036
ARG 470.0058
ALA 480.0055
GLY 490.0064
LYS 500.0083
LEU 510.0096
ALA 520.0096
ALA 530.0113
LYS 540.0133
PHE 550.0133
ARG 560.0139
ALA 570.0170
SER 580.0175
GLY 590.0168
GLN 600.0144
PRO 610.0116
VAL 620.0095
PHE 630.0076
LEU 640.0061
VAL 650.0049
ARG 660.0047
VAL 670.0050
GLY 680.0073
TRP 690.0086
SER 700.0103
ALA 710.0105
ASP 720.0082
TYR 730.0069
ALA 740.0071
GLU 750.0076
ALA 760.0056
LEU 770.0024
LYS 780.0022
GLN 790.0049
PRO 800.0072
VAL 810.0066
ASP 820.0080
ALA 830.0070
PRO 840.0055
SER 850.0053
PRO 860.0070
ALA 870.0069
LYS 880.0103
VAL 890.0141
LEU 900.0128
PRO 910.0155
GLU 920.0176
ASN 930.0119
TRP 940.0100
TRP 950.0093
GLN 960.0097
HIS 970.0064
PRO 980.0049
ALA 990.0056
ALA 1000.0040
LEU 1010.0056
GLY 1020.0082
THR 1030.0093
THR 1040.0125
ASP 1050.0147
SER 1060.0148
ASP 1070.0110
ILE 1080.0095
GLU 1090.0078
ILE 1100.0064
ILE 1110.0057
LYS 1120.0041
ARG 1130.0041
GLN 1140.0022
TRP 1150.0013
GLY 1160.0022
ALA 1170.0034
PHE 1180.0039
TYR 1190.0034
GLY 1200.0032
THR 1210.0047
ASP 1220.0046
LEU 1230.0047
GLU 1240.0046
LEU 1250.0056
GLN 1260.0060
LEU 1270.0061
ARG 1280.0057
ARG 1290.0069
ARG 1300.0081
GLY 1310.0081
ILE 1320.0084
ASP 1330.0086
THR 1340.0088
ILE 1350.0077
VAL 1360.0082
LEU 1370.0061
CYS 1380.0045
GLY 1390.0025
ILE 1400.0025
SER 1410.0019
THR 1420.0028
ASN 1430.0029
ILE 1440.0019
GLY 1450.0018
VAL 1460.0021
GLU 1470.0025
SER 1480.0023
THR 1490.0022
ALA 1500.0024
ARG 1510.0028
ASN 1520.0029
ALA 1530.0033
TRP 1540.0031
GLU 1550.0023
LEU 1560.0031
GLY 1570.0051
PHE 1580.0059
ASN 1590.0069
LEU 1600.0067
VAL 1610.0087
ILE 1620.0071
ALA 1630.0066
GLU 1640.0068
ASP 1650.0073
ALA 1660.0051
CYS 1670.0045
SER 1680.0048
ALA 1690.0045
ALA 1700.0051
SER 1710.0061
ALA 1720.0067
GLU 1730.0054
GLN 1740.0048
HIS 1750.0049
ASN 1760.0055
ASN 1770.0051
SER 1780.0049
ILE 1790.0050
ASN 1800.0056
HIS 1810.0056
ILE 1820.0056
TYR 1830.0049
PRO 1840.0053
ARG 1850.0063
ILE 1860.0055
ALA 1870.0068
ARG 1880.0084
VAL 1890.0091
ARG 1900.0109
SER 1910.0111
VAL 1920.0104
GLU 1930.0130
GLU 1940.0146
ILE 1950.0133
LEU 1960.0138
ASN 1970.0163
ALA 1980.0171
LEU 1990.0166
MET 120.0177
LEU 130.0153
GLU 140.0161
LEU 150.0146
ASN 160.0150
ALA 170.0140
LYS 180.0144
THR 190.0124
THR 200.0107
ALA 210.0090
LEU 220.0073
VAL 230.0057
VAL 240.0039
ILE 250.0029
ASP 260.0030
LEU 270.0030
GLN 280.0055
GLU 290.0071
GLY 300.0079
ILE 310.0064
LEU 320.0059
PRO 330.0076
PHE 340.0068
ALA 350.0063
GLY 360.0065
GLY 370.0065
PRO 380.0072
HIS 390.0066
THR 400.0076
ALA 410.0058
ASP 420.0062
GLU 430.0063
VAL 440.0045
VAL 450.0032
ASN 460.0039
ARG 470.0052
ALA 480.0048
GLY 490.0044
LYS 500.0065
LEU 510.0077
ALA 520.0074
ALA 530.0084
LYS 540.0104
PHE 550.0106
ARG 560.0110
ALA 570.0128
SER 580.0141
GLY 590.0141
GLN 600.0115
PRO 610.0099
VAL 620.0082
PHE 630.0069
LEU 640.0052
VAL 650.0045
ARG 660.0046
VAL 670.0052
GLY 680.0077
TRP 690.0083
SER 700.0103
ALA 710.0110
ASP 720.0086
TYR 730.0074
ALA 740.0079
GLU 750.0081
ALA 760.0059
LEU 770.0016
LYS 780.0017
GLN 790.0063
PRO 800.0081
VAL 810.0077
ASP 820.0089
ALA 830.0084
PRO 840.0068
SER 850.0056
PRO 860.0058
ALA 870.0058
LYS 880.0100
VAL 890.0121
LEU 900.0118
PRO 910.0142
GLU 920.0135
ASN 930.0114
TRP 940.0096
TRP 950.0087
GLN 960.0079
HIS 970.0056
PRO 980.0048
ALA 990.0044
ALA 1000.0030
LEU 1010.0037
GLY 1020.0052
THR 1030.0067
THR 1040.0094
ASP 1050.0121
SER 1060.0126
ASP 1070.0093
ILE 1080.0084
GLU 1090.0067
ILE 1100.0058
ILE 1110.0056
LYS 1120.0052
ARG 1130.0043
GLN 1140.0022
TRP 1150.0008
GLY 1160.0028
ALA 1170.0033
PHE 1180.0039
TYR 1190.0033
GLY 1200.0055
THR 1210.0053
ASP 1220.0055
LEU 1230.0055
GLU 1240.0058
LEU 1250.0056
GLN 1260.0063
LEU 1270.0065
ARG 1280.0057
ARG 1290.0060
ARG 1300.0073
GLY 1310.0071
ILE 1320.0084
ASP 1330.0083
THR 1340.0078
ILE 1350.0067
VAL 1360.0074
LEU 1370.0054
CYS 1380.0041
GLY 1390.0024
ILE 1400.0025
SER 1410.0021
THR 1420.0024
ASN 1430.0028
ILE 1440.0018
GLY 1450.0019
VAL 1460.0018
GLU 1470.0024
SER 1480.0023
THR 1490.0023
ALA 1500.0024
ARG 1510.0029
ASN 1520.0029
ALA 1530.0036
TRP 1540.0032
GLU 1550.0026
LEU 1560.0035
GLY 1570.0043
PHE 1580.0052
ASN 1590.0062
LEU 1600.0068
VAL 1610.0073
ILE 1620.0061
ALA 1630.0065
GLU 1640.0065
ASP 1650.0063
ALA 1660.0046
CYS 1670.0039
SER 1680.0040
ALA 1690.0035
ALA 1700.0038
SER 1710.0041
ALA 1720.0038
GLU 1730.0039
GLN 1740.0038
HIS 1750.0037
ASN 1760.0038
ASN 1770.0040
SER 1780.0039
ILE 1790.0040
ASN 1800.0036
HIS 1810.0043
ILE 1820.0042
TYR 1830.0037
PRO 1840.0056
ARG 1850.0045
ILE 1860.0044
ALA 1870.0055
ARG 1880.0087
VAL 1890.0085
ARG 1900.0098
SER 1910.0100
VAL 1920.0094
GLU 1930.0118
GLU 1940.0133
ILE 1950.0118
LEU 1960.0120
ASN 1970.0143
ALA 1980.0150
LEU 1990.0142

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.