CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  Ecoli yecd  ***

<R2> analysis for 251228182821571726

---  normal mode 14  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0488
MET 120.0176
LEU 130.0143
GLU 140.0138
LEU 150.0111
ASN 160.0110
ALA 170.0088
LYS 180.0098
THR 190.0077
THR 200.0054
ALA 210.0037
LEU 220.0027
VAL 230.0029
VAL 240.0036
ILE 250.0044
ASP 260.0061
LEU 270.0073
GLN 280.0102
GLU 290.0126
GLY 300.0134
ILE 310.0119
LEU 320.0116
PRO 330.0139
PHE 340.0135
ALA 350.0125
GLY 360.0143
GLY 370.0140
PRO 380.0143
HIS 390.0135
THR 400.0141
ALA 410.0125
ASP 420.0122
GLU 430.0117
VAL 440.0100
VAL 450.0089
ASN 460.0086
ARG 470.0080
ALA 480.0061
GLY 490.0053
LYS 500.0052
LEU 510.0047
ALA 520.0028
ALA 530.0028
LYS 540.0046
PHE 550.0045
ARG 560.0052
ALA 570.0066
SER 580.0082
GLY 590.0088
GLN 600.0059
PRO 610.0050
VAL 620.0039
PHE 630.0044
LEU 640.0054
VAL 650.0051
ARG 660.0065
VAL 670.0065
GLY 680.0057
TRP 690.0045
SER 700.0039
ALA 710.0046
ASP 720.0044
TYR 730.0052
ALA 740.0052
GLU 750.0056
ALA 760.0054
LEU 770.0042
LYS 780.0048
GLN 790.0035
PRO 800.0048
VAL 810.0046
ASP 820.0051
ALA 830.0047
PRO 840.0034
SER 850.0052
PRO 860.0067
ALA 870.0075
LYS 880.0102
VAL 890.0048
LEU 900.0102
PRO 910.0157
GLU 920.0186
ASN 930.0175
TRP 940.0144
TRP 950.0124
GLN 960.0131
HIS 970.0105
PRO 980.0110
ALA 990.0105
ALA 1000.0084
LEU 1010.0069
GLY 1020.0066
THR 1030.0078
THR 1040.0092
ASP 1050.0114
SER 1060.0093
ASP 1070.0066
ILE 1080.0058
GLU 1090.0063
ILE 1100.0054
ILE 1110.0058
LYS 1120.0036
ARG 1130.0036
GLN 1140.0028
TRP 1150.0020
GLY 1160.0031
ALA 1170.0028
PHE 1180.0026
TYR 1190.0025
GLY 1200.0041
THR 1210.0041
ASP 1220.0041
LEU 1230.0041
GLU 1240.0036
LEU 1250.0036
GLN 1260.0040
LEU 1270.0032
ARG 1280.0029
ARG 1290.0032
ARG 1300.0033
GLY 1310.0030
ILE 1320.0043
ASP 1330.0041
THR 1340.0039
ILE 1350.0030
VAL 1360.0039
LEU 1370.0038
CYS 1380.0049
GLY 1390.0060
ILE 1400.0068
SER 1410.0063
THR 1420.0060
ASN 1430.0049
ILE 1440.0025
GLY 1450.0023
VAL 1460.0027
GLU 1470.0023
SER 1480.0009
THR 1490.0010
ALA 1500.0011
ARG 1510.0010
ASN 1520.0012
ALA 1530.0011
TRP 1540.0018
GLU 1550.0017
LEU 1560.0019
GLY 1570.0032
PHE 1580.0030
ASN 1590.0041
LEU 1600.0045
VAL 1610.0056
ILE 1620.0060
ALA 1630.0068
GLU 1640.0096
ASP 1650.0105
ALA 1660.0087
CYS 1670.0089
SER 1680.0102
ALA 1690.0097
ALA 1700.0110
SER 1710.0121
ALA 1720.0121
GLU 1730.0102
GLN 1740.0072
HIS 1750.0081
ASN 1760.0085
ASN 1770.0061
SER 1780.0051
ILE 1790.0074
ASN 1800.0065
HIS 1810.0052
ILE 1820.0040
TYR 1830.0046
PRO 1840.0051
ARG 1850.0040
ILE 1860.0035
ALA 1870.0046
ARG 1880.0078
VAL 1890.0085
ARG 1900.0095
SER 1910.0101
VAL 1920.0098
GLU 1930.0121
GLU 1940.0127
ILE 1950.0096
LEU 1960.0094
ASN 1970.0124
ALA 1980.0123
LEU 1990.0101
LEU 150.0120
ASN 160.0116
ALA 170.0098
LYS 180.0100
THR 190.0076
THR 200.0061
ALA 210.0047
LEU 220.0041
VAL 230.0036
VAL 240.0045
ILE 250.0052
ASP 260.0063
LEU 270.0080
GLN 280.0102
GLU 290.0131
GLY 300.0142
ILE 310.0122
LEU 320.0122
PRO 330.0146
PHE 340.0141
ALA 350.0130
GLY 360.0150
GLY 370.0145
PRO 380.0146
HIS 390.0145
THR 400.0146
ALA 410.0128
ASP 420.0124
GLU 430.0124
VAL 440.0105
VAL 450.0090
ASN 460.0091
ARG 470.0091
ALA 480.0069
GLY 490.0060
LYS 500.0072
LEU 510.0066
ALA 520.0045
ALA 530.0052
LYS 540.0074
PHE 550.0062
ARG 560.0064
ALA 570.0085
SER 580.0100
GLY 590.0088
GLN 600.0068
PRO 610.0056
VAL 620.0041
PHE 630.0047
LEU 640.0055
VAL 650.0058
ARG 660.0070
VAL 670.0070
GLY 680.0064
TRP 690.0048
SER 700.0043
ALA 710.0029
ASP 720.0025
TYR 730.0044
ALA 740.0044
GLU 750.0047
ALA 760.0055
LEU 770.0057
LYS 780.0065
GLN 790.0045
PRO 800.0052
VAL 810.0053
ASP 820.0061
ALA 830.0042
PRO 840.0043
SER 850.0058
PRO 860.0071
ALA 870.0095
LYS 880.0085
VAL 890.0048
LEU 900.0102
PRO 910.0195
GLU 920.0203
ASN 930.0186
TRP 940.0153
TRP 950.0118
GLN 960.0126
HIS 970.0099
PRO 980.0117
ALA 990.0098
ALA 1000.0085
LEU 1010.0070
GLY 1020.0057
THR 1030.0069
THR 1040.0074
ASP 1050.0097
SER 1060.0083
ASP 1070.0057
ILE 1080.0059
GLU 1090.0066
ILE 1100.0063
ILE 1110.0049
LYS 1120.0045
ARG 1130.0046
GLN 1140.0053
TRP 1150.0020
GLY 1160.0026
ALA 1170.0031
PHE 1180.0039
TYR 1190.0053
GLY 1200.0044
THR 1210.0043
ASP 1220.0042
LEU 1230.0046
GLU 1240.0040
LEU 1250.0039
GLN 1260.0041
LEU 1270.0035
ARG 1280.0032
ARG 1290.0033
ARG 1300.0034
GLY 1310.0063
ILE 1320.0051
ASP 1330.0052
THR 1340.0050
ILE 1350.0042
VAL 1360.0047
LEU 1370.0045
CYS 1380.0054
GLY 1390.0064
ILE 1400.0074
SER 1410.0075
THR 1420.0071
ASN 1430.0031
ILE 1440.0026
GLY 1450.0025
VAL 1460.0033
GLU 1470.0018
SER 1480.0015
THR 1490.0016
ALA 1500.0019
ARG 1510.0012
ASN 1520.0013
ALA 1530.0016
TRP 1540.0014
GLU 1550.0012
LEU 1560.0015
GLY 1570.0021
PHE 1580.0027
ASN 1590.0050
LEU 1600.0047
VAL 1610.0056
ILE 1620.0059
ALA 1630.0085
GLU 1640.0103
ASP 1650.0114
ALA 1660.0093
CYS 1670.0092
SER 1680.0106
ALA 1690.0102
ALA 1700.0120
SER 1710.0118
ALA 1720.0126
GLU 1730.0101
GLN 1740.0068
HIS 1750.0079
ASN 1760.0084
ASN 1770.0055
SER 1780.0048
ILE 1790.0069
ASN 1800.0067
HIS 1810.0046
ILE 1820.0035
TYR 1830.0039
PRO 1840.0045
ARG 1850.0038
ILE 1860.0033
ALA 1870.0050
ARG 1880.0070
VAL 1890.0078
ARG 1900.0090
SER 1910.0126
VAL 1920.0110
GLU 1930.0135
GLU 1940.0137
ILE 1950.0112
LEU 1960.0115
ASN 1970.0143
ALA 1980.0135
LEU 1990.0114
LEU 130.0287
GLU 140.0301
LEU 150.0261
ASN 160.0274
ALA 170.0246
LYS 180.0260
THR 190.0203
THR 200.0156
ALA 210.0118
LEU 220.0071
VAL 230.0032
VAL 240.0018
ILE 250.0048
ASP 260.0115
LEU 270.0131
GLN 280.0192
GLU 290.0257
GLY 300.0286
ILE 310.0238
LEU 320.0243
PRO 330.0280
PHE 340.0274
ALA 350.0241
GLY 360.0301
GLY 370.0267
PRO 380.0275
HIS 390.0254
THR 400.0271
ALA 410.0235
ASP 420.0234
GLU 430.0219
VAL 440.0163
VAL 450.0139
ASN 460.0137
ARG 470.0132
ALA 480.0071
GLY 490.0040
LYS 500.0086
LEU 510.0094
ALA 520.0060
ALA 530.0088
LYS 540.0151
PHE 550.0154
ARG 560.0166
ALA 570.0226
SER 580.0250
GLY 590.0251
GLN 600.0200
PRO 610.0145
VAL 620.0098
PHE 630.0087
LEU 640.0083
VAL 650.0092
ARG 660.0129
VAL 670.0131
GLY 680.0173
TRP 690.0124
SER 700.0144
ALA 710.0150
ASP 720.0105
TYR 730.0070
ALA 740.0056
GLU 750.0051
ALA 760.0038
LEU 770.0034
LYS 780.0064
GLN 790.0089
PRO 800.0119
VAL 810.0107
ASP 820.0130
ALA 830.0109
PRO 840.0083
SER 850.0075
PRO 860.0123
ALA 870.0108
LYS 880.0183
VAL 890.0253
LEU 900.0284
PRO 910.0414
GLU 920.0488
ASN 930.0374
TRP 940.0311
TRP 950.0269
GLN 960.0292
HIS 970.0203
PRO 980.0197
ALA 990.0180
ALA 1000.0121
LEU 1010.0081
GLY 1020.0099
THR 1030.0145
THR 1040.0194
ASP 1050.0254
SER 1060.0229
ASP 1070.0154
ILE 1080.0144
GLU 1090.0141
ILE 1100.0119
ILE 1110.0131
LYS 1120.0103
ARG 1130.0060
GLN 1140.0041
TRP 1150.0026
GLY 1160.0017
ALA 1170.0033
PHE 1180.0037
TYR 1190.0037
GLY 1200.0054
THR 1210.0067
ASP 1220.0075
LEU 1230.0059
GLU 1240.0065
LEU 1250.0077
GLN 1260.0083
LEU 1270.0076
ARG 1280.0084
ARG 1290.0102
ARG 1300.0112
GLY 1310.0109
ILE 1320.0095
ASP 1330.0127
THR 1340.0117
ILE 1350.0086
VAL 1360.0089
LEU 1370.0060
CYS 1380.0069
GLY 1390.0090
ILE 1400.0132
SER 1410.0096
THR 1420.0085
ASN 1430.0059
ILE 1440.0050
GLY 1450.0036
VAL 1460.0035
GLU 1470.0030
SER 1480.0007
THR 1490.0014
ALA 1500.0021
ARG 1510.0021
ASN 1520.0021
ALA 1530.0038
TRP 1540.0042
GLU 1550.0028
LEU 1560.0039
GLY 1570.0078
PHE 1580.0084
ASN 1590.0102
LEU 1600.0088
VAL 1610.0130
ILE 1620.0115
ALA 1630.0122
GLU 1640.0160
ASP 1650.0195
ALA 1660.0143
CYS 1670.0144
SER 1680.0186
ALA 1690.0171
ALA 1700.0196
SER 1710.0211
ALA 1720.0218
GLU 1730.0133
GLN 1740.0108
HIS 1750.0132
ASN 1760.0142
ASN 1770.0092
SER 1780.0084
ILE 1790.0113
ASN 1800.0119
HIS 1810.0086
ILE 1820.0076
TYR 1830.0067
PRO 1840.0075
ARG 1850.0085
ILE 1860.0069
ALA 1870.0097
ARG 1880.0133
VAL 1890.0159
ARG 1900.0200
SER 1910.0218
VAL 1920.0189
GLU 1930.0252
GLU 1940.0278
ILE 1950.0223
LEU 1960.0224
ASN 1970.0288
ALA 1980.0295
LEU 1990.0261
MET 120.0411
LEU 130.0331
GLU 140.0338
LEU 150.0283
ASN 160.0283
ALA 170.0245
LYS 180.0265
THR 190.0220
THR 200.0168
ALA 210.0122
LEU 220.0074
VAL 230.0034
VAL 240.0019
ILE 250.0047
ASP 260.0102
LEU 270.0121
GLN 280.0190
GLU 290.0245
GLY 300.0267
ILE 310.0228
LEU 320.0222
PRO 330.0278
PHE 340.0264
ALA 350.0241
GLY 360.0260
GLY 370.0249
PRO 380.0259
HIS 390.0250
THR 400.0278
ALA 410.0239
ASP 420.0243
GLU 430.0230
VAL 440.0173
VAL 450.0147
ASN 460.0150
ARG 470.0144
ALA 480.0082
GLY 490.0052
LYS 500.0089
LEU 510.0093
ALA 520.0050
ALA 530.0078
LYS 540.0140
PHE 550.0144
ARG 560.0155
ALA 570.0199
SER 580.0240
GLY 590.0249
GLN 600.0180
PRO 610.0147
VAL 620.0098
PHE 630.0083
LEU 640.0083
VAL 650.0079
ARG 660.0120
VAL 670.0132
GLY 680.0134
TRP 690.0121
SER 700.0144
ALA 710.0154
ASP 720.0082
TYR 730.0064
ALA 740.0054
GLU 750.0049
ALA 760.0027
LEU 770.0036
LYS 780.0066
GLN 790.0101
PRO 800.0114
VAL 810.0108
ASP 820.0124
ALA 830.0117
PRO 840.0113
SER 850.0121
PRO 860.0143
ALA 870.0109
LYS 880.0167
VAL 890.0196
LEU 900.0261
PRO 910.0351
GLU 920.0407
ASN 930.0364
TRP 940.0300
TRP 950.0258
GLN 960.0263
HIS 970.0194
PRO 980.0195
ALA 990.0175
ALA 1000.0120
LEU 1010.0086
GLY 1020.0091
THR 1030.0141
THR 1040.0200
ASP 1050.0271
SER 1060.0242
ASP 1070.0154
ILE 1080.0132
GLU 1090.0131
ILE 1100.0111
ILE 1110.0128
LYS 1120.0059
ARG 1130.0058
GLN 1140.0039
TRP 1150.0030
GLY 1160.0022
ALA 1170.0027
PHE 1180.0032
TYR 1190.0034
GLY 1200.0067
THR 1210.0066
ASP 1220.0074
LEU 1230.0059
GLU 1240.0062
LEU 1250.0078
GLN 1260.0084
LEU 1270.0077
ARG 1280.0083
ARG 1290.0099
ARG 1300.0104
GLY 1310.0103
ILE 1320.0136
ASP 1330.0131
THR 1340.0115
ILE 1350.0083
VAL 1360.0095
LEU 1370.0058
CYS 1380.0066
GLY 1390.0085
ILE 1400.0116
SER 1410.0098
THR 1420.0088
ASN 1430.0060
ILE 1440.0029
GLY 1450.0026
VAL 1460.0030
GLU 1470.0025
SER 1480.0008
THR 1490.0011
ALA 1500.0018
ARG 1510.0017
ASN 1520.0018
ALA 1530.0037
TRP 1540.0037
GLU 1550.0022
LEU 1560.0045
GLY 1570.0071
PHE 1580.0081
ASN 1590.0102
LEU 1600.0102
VAL 1610.0117
ILE 1620.0106
ALA 1630.0119
GLU 1640.0171
ASP 1650.0190
ALA 1660.0143
CYS 1670.0141
SER 1680.0173
ALA 1690.0151
ALA 1700.0166
SER 1710.0177
ALA 1720.0154
GLU 1730.0113
GLN 1740.0084
HIS 1750.0119
ASN 1760.0119
ASN 1770.0085
SER 1780.0073
ILE 1790.0109
ASN 1800.0090
HIS 1810.0077
ILE 1820.0061
TYR 1830.0065
PRO 1840.0090
ARG 1850.0063
ILE 1860.0059
ALA 1870.0085
ARG 1880.0164
VAL 1890.0170
ARG 1900.0196
SER 1910.0205
VAL 1920.0196
GLU 1930.0255
GLU 1940.0283
ILE 1950.0222
LEU 1960.0221
ASN 1970.0293
ALA 1980.0301
LEU 1990.0262

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.