CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  Ecoli yecd  ***

<R2> analysis for 251228182821571726

---  normal mode 16  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0322
MET 120.0167
LEU 130.0123
GLU 140.0135
LEU 150.0103
ASN 160.0097
ALA 170.0071
LYS 180.0099
THR 190.0106
THR 200.0077
ALA 210.0068
LEU 220.0059
VAL 230.0090
VAL 240.0100
ILE 250.0129
ASP 260.0160
LEU 270.0150
GLN 280.0185
GLU 290.0219
GLY 300.0242
ILE 310.0211
LEU 320.0214
PRO 330.0244
PHE 340.0227
ALA 350.0194
GLY 360.0176
GLY 370.0130
PRO 380.0103
HIS 390.0124
THR 400.0179
ALA 410.0193
ASP 420.0206
GLU 430.0166
VAL 440.0133
VAL 450.0156
ASN 460.0154
ARG 470.0109
ALA 480.0099
GLY 490.0117
LYS 500.0101
LEU 510.0055
ALA 520.0058
ALA 530.0071
LYS 540.0054
PHE 550.0009
ARG 560.0016
ALA 570.0049
SER 580.0055
GLY 590.0044
GLN 600.0048
PRO 610.0059
VAL 620.0057
PHE 630.0090
LEU 640.0113
VAL 650.0135
ARG 660.0161
VAL 670.0185
GLY 680.0181
TRP 690.0197
SER 700.0208
ALA 710.0221
ASP 720.0206
TYR 730.0194
ALA 740.0199
GLU 750.0174
ALA 760.0174
LEU 770.0150
LYS 780.0147
GLN 790.0141
PRO 800.0108
VAL 810.0107
ASP 820.0097
ALA 830.0116
PRO 840.0130
SER 850.0155
PRO 860.0179
ALA 870.0247
LYS 880.0262
VAL 890.0283
LEU 900.0255
PRO 910.0258
GLU 920.0294
ASN 930.0254
TRP 940.0235
TRP 950.0209
GLN 960.0223
HIS 970.0185
PRO 980.0189
ALA 990.0182
ALA 1000.0171
LEU 1010.0137
GLY 1020.0130
THR 1030.0127
THR 1040.0107
ASP 1050.0118
SER 1060.0084
ASP 1070.0090
ILE 1080.0097
GLU 1090.0122
ILE 1100.0136
ILE 1110.0165
LYS 1120.0167
ARG 1130.0167
GLN 1140.0157
TRP 1150.0147
GLY 1160.0151
ALA 1170.0146
PHE 1180.0143
TYR 1190.0143
GLY 1200.0157
THR 1210.0134
ASP 1220.0118
LEU 1230.0119
GLU 1240.0115
LEU 1250.0111
GLN 1260.0107
LEU 1270.0112
ARG 1280.0109
ARG 1290.0107
ARG 1300.0111
GLY 1310.0112
ILE 1320.0100
ASP 1330.0113
THR 1340.0095
ILE 1350.0087
VAL 1360.0065
LEU 1370.0084
CYS 1380.0085
GLY 1390.0117
ILE 1400.0143
SER 1410.0140
THR 1420.0103
ASN 1430.0129
ILE 1440.0143
GLY 1450.0156
VAL 1460.0134
GLU 1470.0136
SER 1480.0142
THR 1490.0147
ALA 1500.0134
ARG 1510.0145
ASN 1520.0135
ALA 1530.0137
TRP 1540.0132
GLU 1550.0147
LEU 1560.0123
GLY 1570.0122
PHE 1580.0119
ASN 1590.0113
LEU 1600.0106
VAL 1610.0069
ILE 1620.0063
ALA 1630.0040
GLU 1640.0031
ASP 1650.0059
ALA 1660.0078
CYS 1670.0094
SER 1680.0112
ALA 1690.0127
ALA 1700.0152
SER 1710.0112
ALA 1720.0067
GLU 1730.0060
GLN 1740.0091
HIS 1750.0079
ASN 1760.0057
ASN 1770.0082
SER 1780.0103
ILE 1790.0079
ASN 1800.0084
HIS 1810.0103
ILE 1820.0121
TYR 1830.0118
PRO 1840.0109
ARG 1850.0128
ILE 1860.0131
ALA 1870.0118
ARG 1880.0084
VAL 1890.0053
ARG 1900.0018
SER 1910.0034
VAL 1920.0064
GLU 1930.0100
GLU 1940.0085
ILE 1950.0049
LEU 1960.0081
ASN 1970.0121
ALA 1980.0107
LEU 1990.0084
LEU 150.0076
ASN 160.0093
ALA 170.0068
LYS 180.0086
THR 190.0087
THR 200.0062
ALA 210.0057
LEU 220.0049
VAL 230.0083
VAL 240.0093
ILE 250.0122
ASP 260.0151
LEU 270.0157
GLN 280.0189
GLU 290.0222
GLY 300.0245
ILE 310.0239
LEU 320.0230
PRO 330.0271
PHE 340.0258
ALA 350.0224
GLY 360.0230
GLY 370.0180
PRO 380.0151
HIS 390.0170
THR 400.0213
ALA 410.0218
ASP 420.0223
GLU 430.0182
VAL 440.0151
VAL 450.0162
ASN 460.0158
ARG 470.0120
ALA 480.0100
GLY 490.0108
LYS 500.0099
LEU 510.0055
ALA 520.0048
ALA 530.0062
LYS 540.0055
PHE 550.0018
ARG 560.0020
ALA 570.0059
SER 580.0067
GLY 590.0055
GLN 600.0048
PRO 610.0052
VAL 620.0047
PHE 630.0074
LEU 640.0091
VAL 650.0121
ARG 660.0153
VAL 670.0168
GLY 680.0170
TRP 690.0173
SER 700.0176
ALA 710.0191
ASP 720.0201
TYR 730.0180
ALA 740.0184
GLU 750.0130
ALA 760.0129
LEU 770.0136
LYS 780.0152
GLN 790.0128
PRO 800.0118
VAL 810.0115
ASP 820.0108
ALA 830.0135
PRO 840.0135
SER 850.0169
PRO 860.0176
ALA 870.0216
LYS 880.0239
VAL 890.0275
LEU 900.0244
PRO 910.0311
GLU 920.0322
ASN 930.0275
TRP 940.0245
TRP 950.0208
GLN 960.0197
HIS 970.0163
PRO 980.0173
ALA 990.0181
ALA 1000.0169
LEU 1010.0134
GLY 1020.0116
THR 1030.0100
THR 1040.0076
ASP 1050.0076
SER 1060.0050
ASP 1070.0054
ILE 1080.0077
GLU 1090.0101
ILE 1100.0118
ILE 1110.0141
LYS 1120.0141
ARG 1130.0141
GLN 1140.0143
TRP 1150.0145
GLY 1160.0143
ALA 1170.0139
PHE 1180.0144
TYR 1190.0127
GLY 1200.0110
THR 1210.0106
ASP 1220.0102
LEU 1230.0090
GLU 1240.0107
LEU 1250.0095
GLN 1260.0082
LEU 1270.0095
ARG 1280.0098
ARG 1290.0088
ARG 1300.0092
GLY 1310.0093
ILE 1320.0084
ASP 1330.0098
THR 1340.0085
ILE 1350.0086
VAL 1360.0062
LEU 1370.0083
CYS 1380.0090
GLY 1390.0123
ILE 1400.0158
SER 1410.0164
THR 1420.0123
ASN 1430.0139
ILE 1440.0158
GLY 1450.0158
VAL 1460.0137
GLU 1470.0134
SER 1480.0150
THR 1490.0144
ALA 1500.0133
ARG 1510.0134
ASN 1520.0147
ALA 1530.0139
TRP 1540.0136
GLU 1550.0142
LEU 1560.0132
GLY 1570.0128
PHE 1580.0117
ASN 1590.0114
LEU 1600.0101
VAL 1610.0071
ILE 1620.0074
ALA 1630.0050
GLU 1640.0064
ASP 1650.0092
ALA 1660.0106
CYS 1670.0113
SER 1680.0143
ALA 1690.0165
ALA 1700.0197
SER 1710.0139
ALA 1720.0103
GLU 1730.0098
GLN 1740.0118
HIS 1750.0109
ASN 1760.0073
ASN 1770.0090
SER 1780.0106
ILE 1790.0084
ASN 1800.0071
HIS 1810.0095
ILE 1820.0117
TYR 1830.0108
PRO 1840.0100
ARG 1850.0121
ILE 1860.0133
ALA 1870.0105
ARG 1880.0070
VAL 1890.0051
ARG 1900.0025
SER 1910.0056
VAL 1920.0067
GLU 1930.0088
GLU 1940.0063
ILE 1950.0035
LEU 1960.0069
ASN 1970.0096
ALA 1980.0082
LEU 1990.0065
LEU 130.0012
GLU 140.0018
LEU 150.0022
ASN 160.0037
ALA 170.0025
LYS 180.0053
THR 190.0064
THR 200.0046
ALA 210.0052
LEU 220.0054
VAL 230.0084
VAL 240.0097
ILE 250.0117
ASP 260.0144
LEU 270.0138
GLN 280.0165
GLU 290.0201
GLY 300.0224
ILE 310.0208
LEU 320.0203
PRO 330.0247
PHE 340.0233
ALA 350.0204
GLY 360.0217
GLY 370.0175
PRO 380.0153
HIS 390.0159
THR 400.0194
ALA 410.0203
ASP 420.0201
GLU 430.0167
VAL 440.0148
VAL 450.0151
ASN 460.0145
ARG 470.0117
ALA 480.0105
GLY 490.0103
LYS 500.0093
LEU 510.0064
ALA 520.0057
ALA 530.0056
LYS 540.0045
PHE 550.0014
ARG 560.0015
ALA 570.0045
SER 580.0044
GLY 590.0045
GLN 600.0038
PRO 610.0049
VAL 620.0044
PHE 630.0075
LEU 640.0089
VAL 650.0116
ARG 660.0133
VAL 670.0147
GLY 680.0168
TRP 690.0144
SER 700.0154
ALA 710.0172
ASP 720.0185
TYR 730.0145
ALA 740.0152
GLU 750.0124
ALA 760.0126
LEU 770.0110
LYS 780.0110
GLN 790.0097
PRO 800.0083
VAL 810.0090
ASP 820.0075
ALA 830.0089
PRO 840.0107
SER 850.0147
PRO 860.0170
ALA 870.0192
LYS 880.0207
VAL 890.0225
LEU 900.0215
PRO 910.0243
GLU 920.0292
ASN 930.0214
TRP 940.0202
TRP 950.0180
GLN 960.0171
HIS 970.0150
PRO 980.0160
ALA 990.0145
ALA 1000.0138
LEU 1010.0110
GLY 1020.0091
THR 1030.0081
THR 1040.0052
ASP 1050.0045
SER 1060.0038
ASP 1070.0051
ILE 1080.0074
GLU 1090.0095
ILE 1100.0108
ILE 1110.0128
LYS 1120.0140
ARG 1130.0121
GLN 1140.0121
TRP 1150.0119
GLY 1160.0117
ALA 1170.0117
PHE 1180.0115
TYR 1190.0112
GLY 1200.0114
THR 1210.0111
ASP 1220.0103
LEU 1230.0094
GLU 1240.0106
LEU 1250.0117
GLN 1260.0112
LEU 1270.0101
ARG 1280.0104
ARG 1290.0130
ARG 1300.0117
GLY 1310.0105
ILE 1320.0099
ASP 1330.0080
THR 1340.0069
ILE 1350.0068
VAL 1360.0063
LEU 1370.0085
CYS 1380.0100
GLY 1390.0129
ILE 1400.0155
SER 1410.0139
THR 1420.0118
ASN 1430.0123
ILE 1440.0145
GLY 1450.0134
VAL 1460.0118
GLU 1470.0115
SER 1480.0130
THR 1490.0111
ALA 1500.0101
ARG 1510.0107
ASN 1520.0116
ALA 1530.0093
TRP 1540.0091
GLU 1550.0092
LEU 1560.0096
GLY 1570.0093
PHE 1580.0084
ASN 1590.0079
LEU 1600.0079
VAL 1610.0066
ILE 1620.0080
ALA 1630.0082
GLU 1640.0089
ASP 1650.0102
ALA 1660.0110
CYS 1670.0124
SER 1680.0149
ALA 1690.0157
ALA 1700.0179
SER 1710.0157
ALA 1720.0129
GLU 1730.0099
GLN 1740.0113
HIS 1750.0110
ASN 1760.0088
ASN 1770.0089
SER 1780.0099
ILE 1790.0085
ASN 1800.0071
HIS 1810.0083
ILE 1820.0096
TYR 1830.0092
PRO 1840.0081
ARG 1850.0085
ILE 1860.0093
ALA 1870.0080
ARG 1880.0063
VAL 1890.0066
ARG 1900.0057
SER 1910.0076
VAL 1920.0084
GLU 1930.0086
GLU 1940.0058
ILE 1950.0043
LEU 1960.0057
ASN 1970.0059
ALA 1980.0031
LEU 1990.0026
MET 120.0064
LEU 130.0031
GLU 140.0041
LEU 150.0032
ASN 160.0035
ALA 170.0031
LYS 180.0047
THR 190.0061
THR 200.0058
ALA 210.0071
LEU 220.0079
VAL 230.0101
VAL 240.0113
ILE 250.0126
ASP 260.0151
LEU 270.0149
GLN 280.0177
GLU 290.0199
GLY 300.0212
ILE 310.0187
LEU 320.0198
PRO 330.0219
PHE 340.0200
ALA 350.0173
GLY 360.0151
GLY 370.0117
PRO 380.0097
HIS 390.0123
THR 400.0170
ALA 410.0189
ASP 420.0201
GLU 430.0164
VAL 440.0141
VAL 450.0163
ASN 460.0157
ARG 470.0122
ALA 480.0119
GLY 490.0131
LYS 500.0109
LEU 510.0084
ALA 520.0091
ALA 530.0087
LYS 540.0059
PHE 550.0055
ARG 560.0064
ALA 570.0042
SER 580.0023
GLY 590.0046
GLN 600.0049
PRO 610.0069
VAL 620.0078
PHE 630.0098
LEU 640.0124
VAL 650.0130
ARG 660.0148
VAL 670.0157
GLY 680.0143
TRP 690.0149
SER 700.0153
ALA 710.0161
ASP 720.0152
TYR 730.0142
ALA 740.0137
GLU 750.0115
ALA 760.0116
LEU 770.0097
LYS 780.0096
GLN 790.0098
PRO 800.0074
VAL 810.0080
ASP 820.0075
ALA 830.0088
PRO 840.0109
SER 850.0110
PRO 860.0129
ALA 870.0185
LYS 880.0181
VAL 890.0208
LEU 900.0200
PRO 910.0207
GLU 920.0250
ASN 930.0223
TRP 940.0204
TRP 950.0192
GLN 960.0211
HIS 970.0187
PRO 980.0186
ALA 990.0183
ALA 1000.0168
LEU 1010.0153
GLY 1020.0148
THR 1030.0155
THR 1040.0150
ASP 1050.0163
SER 1060.0130
ASP 1070.0124
ILE 1080.0109
GLU 1090.0127
ILE 1100.0128
ILE 1110.0148
LYS 1120.0130
ARG 1130.0124
GLN 1140.0115
TRP 1150.0109
GLY 1160.0119
ALA 1170.0114
PHE 1180.0107
TYR 1190.0098
GLY 1200.0120
THR 1210.0106
ASP 1220.0093
LEU 1230.0101
GLU 1240.0099
LEU 1250.0096
GLN 1260.0090
LEU 1270.0093
ARG 1280.0101
ARG 1290.0102
ARG 1300.0101
GLY 1310.0099
ILE 1320.0069
ASP 1330.0078
THR 1340.0075
ILE 1350.0080
VAL 1360.0073
LEU 1370.0091
CYS 1380.0098
GLY 1390.0122
ILE 1400.0135
SER 1410.0126
THR 1420.0092
ASN 1430.0104
ILE 1440.0116
GLY 1450.0130
VAL 1460.0115
GLU 1470.0112
SER 1480.0115
THR 1490.0121
ALA 1500.0109
ARG 1510.0116
ASN 1520.0101
ALA 1530.0100
TRP 1540.0095
GLU 1550.0111
LEU 1560.0080
GLY 1570.0081
PHE 1580.0082
ASN 1590.0078
LEU 1600.0085
VAL 1610.0060
ILE 1620.0066
ALA 1630.0064
GLU 1640.0056
ASP 1650.0077
ALA 1660.0098
CYS 1670.0103
SER 1680.0110
ALA 1690.0114
ALA 1700.0128
SER 1710.0092
ALA 1720.0056
GLU 1730.0045
GLN 1740.0076
HIS 1750.0071
ASN 1760.0051
ASN 1770.0069
SER 1780.0088
ILE 1790.0068
ASN 1800.0071
HIS 1810.0084
ILE 1820.0098
TYR 1830.0097
PRO 1840.0078
ARG 1850.0097
ILE 1860.0103
ALA 1870.0091
ARG 1880.0055
VAL 1890.0043
ARG 1900.0031
SER 1910.0053
VAL 1920.0075
GLU 1930.0077
GLU 1940.0049
ILE 1950.0037
LEU 1960.0056
ASN 1970.0054
ALA 1980.0027
LEU 1990.0020

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.