CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  Ecoli yecd  ***

<R2> analysis for 251228182821571726

---  normal mode 23  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0462
MET 120.0293
LEU 130.0253
GLU 140.0273
LEU 150.0242
ASN 160.0200
ALA 170.0165
LYS 180.0192
THR 190.0200
THR 200.0156
ALA 210.0135
LEU 220.0104
VAL 230.0113
VAL 240.0100
ILE 250.0113
ASP 260.0113
LEU 270.0103
GLN 280.0133
GLU 290.0150
GLY 300.0160
ILE 310.0167
LEU 320.0131
PRO 330.0140
PHE 340.0145
ALA 350.0134
GLY 360.0118
GLY 370.0114
PRO 380.0109
HIS 390.0091
THR 400.0101
ALA 410.0100
ASP 420.0079
GLU 430.0067
VAL 440.0068
VAL 450.0061
ASN 460.0035
ARG 470.0045
ALA 480.0054
GLY 490.0026
LYS 500.0037
LEU 510.0066
ALA 520.0055
ALA 530.0041
LYS 540.0085
PHE 550.0097
ARG 560.0073
ALA 570.0086
SER 580.0125
GLY 590.0118
GLN 600.0104
PRO 610.0104
VAL 620.0087
PHE 630.0108
LEU 640.0090
VAL 650.0100
ARG 660.0105
VAL 670.0115
GLY 680.0101
TRP 690.0078
SER 700.0100
ALA 710.0149
ASP 720.0126
TYR 730.0089
ALA 740.0074
GLU 750.0062
ALA 760.0068
LEU 770.0084
LYS 780.0077
GLN 790.0096
PRO 800.0108
VAL 810.0098
ASP 820.0088
ALA 830.0087
PRO 840.0154
SER 850.0153
PRO 860.0137
ALA 870.0122
LYS 880.0222
VAL 890.0231
LEU 900.0222
PRO 910.0266
GLU 920.0212
ASN 930.0191
TRP 940.0173
TRP 950.0122
GLN 960.0126
HIS 970.0102
PRO 980.0098
ALA 990.0073
ALA 1000.0050
LEU 1010.0060
GLY 1020.0047
THR 1030.0070
THR 1040.0076
ASP 1050.0109
SER 1060.0110
ASP 1070.0097
ILE 1080.0096
GLU 1090.0092
ILE 1100.0089
ILE 1110.0089
LYS 1120.0082
ARG 1130.0065
GLN 1140.0072
TRP 1150.0088
GLY 1160.0069
ALA 1170.0075
PHE 1180.0076
TYR 1190.0068
GLY 1200.0064
THR 1210.0068
ASP 1220.0073
LEU 1230.0071
GLU 1240.0106
LEU 1250.0095
GLN 1260.0087
LEU 1270.0093
ARG 1280.0115
ARG 1290.0100
ARG 1300.0095
GLY 1310.0105
ILE 1320.0157
ASP 1330.0167
THR 1340.0144
ILE 1350.0122
VAL 1360.0113
LEU 1370.0106
CYS 1380.0085
GLY 1390.0085
ILE 1400.0098
SER 1410.0096
THR 1420.0098
ASN 1430.0102
ILE 1440.0087
GLY 1450.0083
VAL 1460.0079
GLU 1470.0085
SER 1480.0093
THR 1490.0081
ALA 1500.0059
ARG 1510.0072
ASN 1520.0078
ALA 1530.0068
TRP 1540.0061
GLU 1550.0077
LEU 1560.0122
GLY 1570.0120
PHE 1580.0112
ASN 1590.0105
LEU 1600.0119
VAL 1610.0107
ILE 1620.0098
ALA 1630.0092
GLU 1640.0082
ASP 1650.0055
ALA 1660.0061
CYS 1670.0086
SER 1680.0105
ALA 1690.0110
ALA 1700.0114
SER 1710.0121
ALA 1720.0114
GLU 1730.0130
GLN 1740.0112
HIS 1750.0097
ASN 1760.0092
ASN 1770.0111
SER 1780.0104
ILE 1790.0089
ASN 1800.0087
HIS 1810.0105
ILE 1820.0105
TYR 1830.0090
PRO 1840.0077
ARG 1850.0085
ILE 1860.0105
ALA 1870.0099
ARG 1880.0135
VAL 1890.0110
ARG 1900.0104
SER 1910.0090
VAL 1920.0085
GLU 1930.0125
GLU 1940.0161
ILE 1950.0156
LEU 1960.0152
ASN 1970.0212
ALA 1980.0232
LEU 1990.0201
LEU 150.0217
ASN 160.0260
ALA 170.0233
LYS 180.0276
THR 190.0241
THR 200.0192
ALA 210.0170
LEU 220.0124
VAL 230.0126
VAL 240.0109
ILE 250.0132
ASP 260.0137
LEU 270.0135
GLN 280.0128
GLU 290.0142
GLY 300.0167
ILE 310.0172
LEU 320.0148
PRO 330.0172
PHE 340.0175
ALA 350.0136
GLY 360.0151
GLY 370.0125
PRO 380.0104
HIS 390.0095
THR 400.0115
ALA 410.0111
ASP 420.0092
GLU 430.0072
VAL 440.0058
VAL 450.0053
ASN 460.0035
ARG 470.0032
ALA 480.0048
GLY 490.0041
LYS 500.0078
LEU 510.0085
ALA 520.0094
ALA 530.0116
LYS 540.0168
PHE 550.0162
ARG 560.0175
ALA 570.0222
SER 580.0260
GLY 590.0227
GLN 600.0193
PRO 610.0179
VAL 620.0122
PHE 630.0107
LEU 640.0097
VAL 650.0128
ARG 660.0143
VAL 670.0129
GLY 680.0099
TRP 690.0121
SER 700.0191
ALA 710.0346
ASP 720.0320
TYR 730.0221
ALA 740.0170
GLU 750.0093
ALA 760.0084
LEU 770.0079
LYS 780.0086
GLN 790.0106
PRO 800.0108
VAL 810.0115
ASP 820.0129
ALA 830.0271
PRO 840.0264
SER 850.0297
PRO 860.0353
ALA 870.0379
LYS 880.0462
VAL 890.0451
LEU 900.0329
PRO 910.0261
GLU 920.0223
ASN 930.0157
TRP 940.0147
TRP 950.0108
GLN 960.0099
HIS 970.0095
PRO 980.0104
ALA 990.0076
ALA 1000.0056
LEU 1010.0054
GLY 1020.0037
THR 1030.0069
THR 1040.0104
ASP 1050.0160
SER 1060.0168
ASP 1070.0095
ILE 1080.0112
GLU 1090.0116
ILE 1100.0127
ILE 1110.0098
LYS 1120.0094
ARG 1130.0064
GLN 1140.0084
TRP 1150.0104
GLY 1160.0092
ALA 1170.0086
PHE 1180.0093
TYR 1190.0062
GLY 1200.0049
THR 1210.0071
ASP 1220.0090
LEU 1230.0107
GLU 1240.0118
LEU 1250.0112
GLN 1260.0102
LEU 1270.0145
ARG 1280.0143
ARG 1290.0124
ARG 1300.0132
GLY 1310.0222
ILE 1320.0198
ASP 1330.0208
THR 1340.0178
ILE 1350.0147
VAL 1360.0110
LEU 1370.0106
CYS 1380.0082
GLY 1390.0108
ILE 1400.0122
SER 1410.0131
THR 1420.0119
ASN 1430.0118
ILE 1440.0125
GLY 1450.0121
VAL 1460.0109
GLU 1470.0102
SER 1480.0122
THR 1490.0108
ALA 1500.0095
ARG 1510.0094
ASN 1520.0113
ALA 1530.0093
TRP 1540.0086
GLU 1550.0114
LEU 1560.0134
GLY 1570.0116
PHE 1580.0116
ASN 1590.0143
LEU 1600.0123
VAL 1610.0096
ILE 1620.0081
ALA 1630.0063
GLU 1640.0051
ASP 1650.0032
ALA 1660.0036
CYS 1670.0083
SER 1680.0103
ALA 1690.0131
ALA 1700.0153
SER 1710.0120
ALA 1720.0123
GLU 1730.0148
GLN 1740.0139
HIS 1750.0106
ASN 1760.0111
ASN 1770.0128
SER 1780.0119
ILE 1790.0087
ASN 1800.0099
HIS 1810.0114
ILE 1820.0112
TYR 1830.0093
PRO 1840.0075
ARG 1850.0091
ILE 1860.0103
ALA 1870.0109
ARG 1880.0085
VAL 1890.0061
ARG 1900.0049
SER 1910.0049
VAL 1920.0084
GLU 1930.0144
GLU 1940.0143
ILE 1950.0143
LEU 1960.0180
ASN 1970.0228
ALA 1980.0237
LEU 1990.0231
LEU 130.0137
GLU 140.0164
LEU 150.0165
ASN 160.0185
ALA 170.0162
LYS 180.0190
THR 190.0188
THR 200.0159
ALA 210.0138
LEU 220.0110
VAL 230.0117
VAL 240.0099
ILE 250.0117
ASP 260.0116
LEU 270.0098
GLN 280.0104
GLU 290.0141
GLY 300.0165
ILE 310.0163
LEU 320.0153
PRO 330.0130
PHE 340.0138
ALA 350.0106
GLY 360.0111
GLY 370.0095
PRO 380.0091
HIS 390.0083
THR 400.0080
ALA 410.0091
ASP 420.0069
GLU 430.0063
VAL 440.0078
VAL 450.0077
ASN 460.0046
ARG 470.0058
ALA 480.0078
GLY 490.0057
LYS 500.0059
LEU 510.0087
ALA 520.0085
ALA 530.0077
LYS 540.0101
PHE 550.0118
ARG 560.0109
ALA 570.0131
SER 580.0149
GLY 590.0156
GLN 600.0153
PRO 610.0110
VAL 620.0090
PHE 630.0103
LEU 640.0095
VAL 650.0088
ARG 660.0098
VAL 670.0118
GLY 680.0126
TRP 690.0100
SER 700.0089
ALA 710.0106
ASP 720.0097
TYR 730.0096
ALA 740.0076
GLU 750.0088
ALA 760.0115
LEU 770.0101
LYS 780.0100
GLN 790.0099
PRO 800.0099
VAL 810.0120
ASP 820.0109
ALA 830.0115
PRO 840.0137
SER 850.0185
PRO 860.0240
ALA 870.0210
LYS 880.0253
VAL 890.0243
LEU 900.0234
PRO 910.0287
GLU 920.0277
ASN 930.0188
TRP 940.0175
TRP 950.0126
GLN 960.0123
HIS 970.0092
PRO 980.0095
ALA 990.0078
ALA 1000.0062
LEU 1010.0058
GLY 1020.0048
THR 1030.0062
THR 1040.0062
ASP 1050.0094
SER 1060.0098
ASP 1070.0085
ILE 1080.0093
GLU 1090.0083
ILE 1100.0085
ILE 1110.0091
LYS 1120.0097
ARG 1130.0078
GLN 1140.0071
TRP 1150.0069
GLY 1160.0076
ALA 1170.0072
PHE 1180.0070
TYR 1190.0062
GLY 1200.0060
THR 1210.0095
ASP 1220.0080
LEU 1230.0070
GLU 1240.0093
LEU 1250.0104
GLN 1260.0089
LEU 1270.0108
ARG 1280.0114
ARG 1290.0103
ARG 1300.0110
GLY 1310.0129
ILE 1320.0153
ASP 1330.0170
THR 1340.0153
ILE 1350.0139
VAL 1360.0122
LEU 1370.0106
CYS 1380.0096
GLY 1390.0097
ILE 1400.0107
SER 1410.0081
THR 1420.0083
ASN 1430.0073
ILE 1440.0068
GLY 1450.0074
VAL 1460.0080
GLU 1470.0073
SER 1480.0066
THR 1490.0078
ALA 1500.0058
ARG 1510.0056
ASN 1520.0072
ALA 1530.0103
TRP 1540.0081
GLU 1550.0085
LEU 1560.0104
GLY 1570.0126
PHE 1580.0123
ASN 1590.0115
LEU 1600.0107
VAL 1610.0118
ILE 1620.0104
ALA 1630.0093
GLU 1640.0078
ASP 1650.0072
ALA 1660.0078
CYS 1670.0092
SER 1680.0096
ALA 1690.0091
ALA 1700.0089
SER 1710.0087
ALA 1720.0087
GLU 1730.0073
GLN 1740.0076
HIS 1750.0077
ASN 1760.0074
ASN 1770.0076
SER 1780.0079
ILE 1790.0067
ASN 1800.0060
HIS 1810.0066
ILE 1820.0079
TYR 1830.0069
PRO 1840.0059
ARG 1850.0075
ILE 1860.0097
ALA 1870.0095
ARG 1880.0085
VAL 1890.0094
ARG 1900.0090
SER 1910.0084
VAL 1920.0095
GLU 1930.0098
GLU 1940.0115
ILE 1950.0128
LEU 1960.0129
ASN 1970.0145
ALA 1980.0164
LEU 1990.0166
MET 120.0365
LEU 130.0273
GLU 140.0326
LEU 150.0266
ASN 160.0197
ALA 170.0168
LYS 180.0206
THR 190.0205
THR 200.0158
ALA 210.0135
LEU 220.0101
VAL 230.0115
VAL 240.0110
ILE 250.0122
ASP 260.0125
LEU 270.0113
GLN 280.0143
GLU 290.0151
GLY 300.0157
ILE 310.0165
LEU 320.0130
PRO 330.0140
PHE 340.0143
ALA 350.0119
GLY 360.0108
GLY 370.0093
PRO 380.0081
HIS 390.0067
THR 400.0081
ALA 410.0092
ASP 420.0077
GLU 430.0050
VAL 440.0054
VAL 450.0060
ASN 460.0037
ARG 470.0012
ALA 480.0031
GLY 490.0026
LYS 500.0026
LEU 510.0045
ALA 520.0040
ALA 530.0030
LYS 540.0079
PHE 550.0096
ARG 560.0078
ALA 570.0094
SER 580.0141
GLY 590.0144
GLN 600.0114
PRO 610.0115
VAL 620.0094
PHE 630.0119
LEU 640.0107
VAL 650.0114
ARG 660.0118
VAL 670.0125
GLY 680.0116
TRP 690.0125
SER 700.0180
ALA 710.0251
ASP 720.0240
TYR 730.0174
ALA 740.0156
GLU 750.0104
ALA 760.0090
LEU 770.0093
LYS 780.0094
GLN 790.0096
PRO 800.0107
VAL 810.0100
ASP 820.0105
ALA 830.0112
PRO 840.0210
SER 850.0226
PRO 860.0230
ALA 870.0230
LYS 880.0364
VAL 890.0339
LEU 900.0265
PRO 910.0274
GLU 920.0182
ASN 930.0165
TRP 940.0163
TRP 950.0126
GLN 960.0135
HIS 970.0117
PRO 980.0112
ALA 990.0097
ALA 1000.0080
LEU 1010.0081
GLY 1020.0078
THR 1030.0102
THR 1040.0129
ASP 1050.0170
SER 1060.0155
ASP 1070.0122
ILE 1080.0106
GLU 1090.0105
ILE 1100.0102
ILE 1110.0103
LYS 1120.0080
ARG 1130.0061
GLN 1140.0066
TRP 1150.0082
GLY 1160.0063
ALA 1170.0063
PHE 1180.0062
TYR 1190.0051
GLY 1200.0070
THR 1210.0070
ASP 1220.0069
LEU 1230.0070
GLU 1240.0105
LEU 1250.0094
GLN 1260.0096
LEU 1270.0105
ARG 1280.0117
ARG 1290.0106
ARG 1300.0116
GLY 1310.0121
ILE 1320.0160
ASP 1330.0169
THR 1340.0143
ILE 1350.0122
VAL 1360.0104
LEU 1370.0099
CYS 1380.0078
GLY 1390.0086
ILE 1400.0103
SER 1410.0100
THR 1420.0095
ASN 1430.0094
ILE 1440.0080
GLY 1450.0079
VAL 1460.0076
GLU 1470.0077
SER 1480.0073
THR 1490.0068
ALA 1500.0051
ARG 1510.0060
ASN 1520.0070
ALA 1530.0065
TRP 1540.0068
GLU 1550.0079
LEU 1560.0121
GLY 1570.0120
PHE 1580.0115
ASN 1590.0110
LEU 1600.0114
VAL 1610.0094
ILE 1620.0077
ALA 1630.0061
GLU 1640.0052
ASP 1650.0028
ALA 1660.0040
CYS 1670.0072
SER 1680.0094
ALA 1690.0102
ALA 1700.0109
SER 1710.0101
ALA 1720.0084
GLU 1730.0088
GLN 1740.0087
HIS 1750.0083
ASN 1760.0076
ASN 1770.0084
SER 1780.0079
ILE 1790.0070
ASN 1800.0065
HIS 1810.0079
ILE 1820.0081
TYR 1830.0068
PRO 1840.0067
ARG 1850.0078
ILE 1860.0093
ALA 1870.0089
ARG 1880.0121
VAL 1890.0080
ARG 1900.0073
SER 1910.0060
VAL 1920.0072
GLU 1930.0138
GLU 1940.0163
ILE 1950.0147
LEU 1960.0155
ASN 1970.0226
ALA 1980.0241
LEU 1990.0208

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.