Should you encounter any unexpected behaviour,
please let us know.
elNémo has been hacked on november 27th.
It has been moved away and runs again.
Still some additional cleaning from time to time
Sorry for the inconvenience.

* Ecoli yecd *

<R²> analysis for 251228182821571726

--- normal mode 26 ---

This page gives a visualization of the normalized mean square displacement <R²> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

X Y Z residue <R²> <R²>_max = 0.0620
MET 12 0.0271
LEU 13 0.0229
GLU 14 0.0212
LEU 15 0.0179
ASN 16 0.0144
ALA 17 0.0118
LYS 18 0.0141
THR 19 0.0148
THR 20 0.0123
ALA 21 0.0110
LEU 22 0.0092
VAL 23 0.0096
VAL 24 0.0076
ILE 25 0.0094
ASP 26 0.0092
LEU 27 0.0069
GLN 28 0.0115
GLU 29 0.0132
GLY 30 0.0187
ILE 31 0.0173
LEU 32 0.0100
PRO 33 0.0134
PHE 34 0.0193
ALA 35 0.0188
GLY 36 0.0218
GLY 37 0.0211
PRO 38 0.0208
HIS 39 0.0187
THR 40 0.0191
ALA 41 0.0141
ASP 42 0.0132
GLU 43 0.0159
VAL 44 0.0124
VAL 45 0.0087
ASN 46 0.0113
ARG 47 0.0120
ALA 48 0.0087
GLY 49 0.0086
LYS 50 0.0110
LEU 51 0.0091
ALA 52 0.0070
ALA 53 0.0086
LYS 54 0.0082
PHE 55 0.0071
ARG 56 0.0065
ALA 57 0.0075
SER 58 0.0063
GLY 59 0.0072
GLN 60 0.0078
PRO 61 0.0084
VAL 62 0.0076
PHE 63 0.0086
LEU 64 0.0061
VAL 65 0.0090
ARG 66 0.0113
VAL 67 0.0143
GLY 68 0.0155
TRP 69 0.0137
SER 70 0.0130
ALA 71 0.0145
ASP 72 0.0144
TYR 73 0.0154
ALA 74 0.0161
GLU 75 0.0131
ALA 76 0.0116
LEU 77 0.0100
LYS 78 0.0136
GLN 79 0.0119
PRO 80 0.0161
VAL 81 0.0158
ASP 82 0.0183
ALA 83 0.0205
PRO 84 0.0270
SER 85 0.0318
PRO 86 0.0419
ALA 87 0.0420
LYS 88 0.0413
VAL 89 0.0285
LEU 90 0.0333
PRO 91 0.0428
GLU 92 0.0403
ASN 93 0.0337
TRP 94 0.0287
TRP 95 0.0207
GLN 96 0.0179
HIS 97 0.0105
PRO 98 0.0069
ALA 99 0.0108
ALA 100 0.0088
LEU 101 0.0060
GLY 102 0.0102
THR 103 0.0102
THR 104 0.0118
ASP 105 0.0152
SER 106 0.0113
ASP 107 0.0093
ILE 108 0.0082
GLU 109 0.0090
ILE 110 0.0097
ILE 111 0.0106
LYS 112 0.0096
ARG 113 0.0084
GLN 114 0.0060
TRP 115 0.0052
GLY 116 0.0059
ALA 117 0.0057
PHE 118 0.0063
TYR 119 0.0069
GLY 120 0.0100
THR 121 0.0089
ASP 122 0.0086
LEU 123 0.0078
GLU 124 0.0088
LEU 125 0.0089
GLN 126 0.0090
LEU 127 0.0088
ARG 128 0.0080
ARG 129 0.0084
ARG 130 0.0085
GLY 131 0.0081
ILE 132 0.0121
ASP 133 0.0126
THR 134 0.0121
ILE 135 0.0115
VAL 136 0.0119
LEU 137 0.0121
CYS 138 0.0114
GLY 139 0.0110
ILE 140 0.0129
SER 141 0.0118
THR 142 0.0102
ASN 143 0.0099
ILE 144 0.0081
GLY 145 0.0078
VAL 146 0.0080
GLU 147 0.0083
SER 148 0.0071
THR 149 0.0080
ALA 150 0.0089
ARG 151 0.0089
ASN 152 0.0087
ALA 153 0.0100
TRP 154 0.0094
GLU 155 0.0088
LEU 156 0.0101
GLY 157 0.0107
PHE 158 0.0116
ASN 159 0.0116
LEU 160 0.0136
VAL 161 0.0135
ILE 162 0.0134
ALA 163 0.0137
GLU 164 0.0143
ASP 165 0.0141
ALA 166 0.0124
CYS 167 0.0133
SER 168 0.0155
ALA 169 0.0163
ALA 170 0.0181
SER 171 0.0185
ALA 172 0.0148
GLU 173 0.0144
GLN 174 0.0147
HIS 175 0.0139
ASN 176 0.0128
ASN 177 0.0133
SER 178 0.0128
ILE 179 0.0115
ASN 180 0.0115
HIS 181 0.0123
ILE 182 0.0116
TYR 183 0.0109
PRO 184 0.0108
ARG 185 0.0112
ILE 186 0.0110
ALA 187 0.0124
ARG 188 0.0162
VAL 189 0.0153
ARG 190 0.0140
SER 191 0.0133
VAL 192 0.0126
GLU 193 0.0148
GLU 194 0.0170
ILE 195 0.0146
LEU 196 0.0133
ASN 197 0.0173
ALA 198 0.0176
LEU 199 0.0131
LEU 15 0.0229
ASN 16 0.0238
ALA 17 0.0204
LYS 18 0.0211
THR 19 0.0153
THR 20 0.0121
ALA 21 0.0070
LEU 22 0.0041
VAL 23 0.0060
VAL 24 0.0060
ILE 25 0.0073
ASP 26 0.0081
LEU 27 0.0071
GLN 28 0.0091
GLU 29 0.0113
GLY 30 0.0131
ILE 31 0.0099
LEU 32 0.0096
PRO 33 0.0119
PHE 34 0.0137
ALA 35 0.0155
GLY 36 0.0174
GLY 37 0.0144
PRO 38 0.0120
HIS 39 0.0124
THR 40 0.0148
ALA 41 0.0143
ASP 42 0.0140
GLU 43 0.0113
VAL 44 0.0087
VAL 45 0.0091
ASN 46 0.0099
ARG 47 0.0060
ALA 48 0.0044
GLY 49 0.0087
LYS 50 0.0093
LEU 51 0.0078
ALA 52 0.0088
ALA 53 0.0160
LYS 54 0.0170
PHE 55 0.0132
ARG 56 0.0152
ALA 57 0.0205
SER 58 0.0206
GLY 59 0.0162
GLN 60 0.0120
PRO 61 0.0057
VAL 62 0.0019
PHE 63 0.0083
LEU 64 0.0079
VAL 65 0.0086
ARG 66 0.0089
VAL 67 0.0087
GLY 68 0.0111
TRP 69 0.0131
SER 70 0.0194
ALA 71 0.0227
ASP 72 0.0158
TYR 73 0.0111
ALA 74 0.0046
GLU 75 0.0044
ALA 76 0.0031
LEU 77 0.0053
LYS 78 0.0093
GLN 79 0.0134
PRO 80 0.0148
VAL 81 0.0128
ASP 82 0.0132
ALA 83 0.0143
PRO 84 0.0202
SER 85 0.0309
PRO 86 0.0451
ALA 87 0.0311
LYS 88 0.0335
VAL 89 0.0310
LEU 90 0.0417
PRO 91 0.0541
GLU 92 0.0604
ASN 93 0.0441
TRP 94 0.0294
TRP 95 0.0201
GLN 96 0.0204
HIS 97 0.0139
PRO 98 0.0088
ALA 99 0.0100
ALA 100 0.0064
LEU 101 0.0045
GLY 102 0.0051
THR 103 0.0045
THR 104 0.0116
ASP 105 0.0159
SER 106 0.0105
ASP 107 0.0033
ILE 108 0.0057
GLU 109 0.0086
ILE 110 0.0110
ILE 111 0.0131
LYS 112 0.0095
ARG 113 0.0062
GLN 114 0.0043
TRP 115 0.0081
GLY 116 0.0074
ALA 117 0.0068
PHE 118 0.0071
TYR 119 0.0076
GLY 120 0.0070
THR 121 0.0081
ASP 122 0.0093
LEU 123 0.0068
GLU 124 0.0058
LEU 125 0.0043
GLN 126 0.0046
LEU 127 0.0032
ARG 128 0.0022
ARG 129 0.0010
ARG 130 0.0012
GLY 131 0.0090
ILE 132 0.0088
ASP 133 0.0118
THR 134 0.0113
ILE 135 0.0071
VAL 136 0.0057
LEU 137 0.0057
CYS 138 0.0057
GLY 139 0.0089
ILE 140 0.0106
SER 141 0.0116
THR 142 0.0106
ASN 143 0.0126
ILE 144 0.0119
GLY 145 0.0100
VAL 146 0.0092
GLU 147 0.0088
SER 148 0.0084
THR 149 0.0065
ALA 150 0.0061
ARG 151 0.0042
ASN 152 0.0034
ALA 153 0.0021
TRP 154 0.0027
GLU 155 0.0036
LEU 156 0.0033
GLY 157 0.0031
PHE 158 0.0038
ASN 159 0.0100
LEU 160 0.0080
VAL 161 0.0076
ILE 162 0.0071
ALA 163 0.0057
GLU 164 0.0081
ASP 165 0.0063
ALA 166 0.0061
CYS 167 0.0101
SER 168 0.0118
ALA 169 0.0139
ALA 170 0.0158
SER 171 0.0165
ALA 172 0.0157
GLU 173 0.0168
GLN 174 0.0162
HIS 175 0.0147
ASN 176 0.0151
ASN 177 0.0151
SER 178 0.0142
ILE 179 0.0149
ASN 180 0.0156
HIS 181 0.0138
ILE 182 0.0119
TYR 183 0.0106
PRO 184 0.0120
ARG 185 0.0123
ILE 186 0.0095
ALA 187 0.0117
ARG 188 0.0128
VAL 189 0.0116
ARG 190 0.0098
SER 191 0.0079
VAL 192 0.0045
GLU 193 0.0090
GLU 194 0.0142
ILE 195 0.0144
LEU 196 0.0166
ASN 197 0.0231
ALA 198 0.0252
LEU 199 0.0228
LEU 13 0.0147
GLU 14 0.0175
LEU 15 0.0146
ASN 16 0.0161
ALA 17 0.0142
LYS 18 0.0133
THR 19 0.0100
THR 20 0.0087
ALA 21 0.0052
LEU 22 0.0050
VAL 23 0.0049
VAL 24 0.0048
ILE 25 0.0046
ASP 26 0.0042
LEU 27 0.0044
GLN 28 0.0060
GLU 29 0.0107
GLY 30 0.0112
ILE 31 0.0095
LEU 32 0.0097
PRO 33 0.0087
PHE 34 0.0068
ALA 35 0.0043
GLY 36 0.0027
GLY 37 0.0032
PRO 38 0.0032
HIS 39 0.0042
THR 40 0.0050
ALA 41 0.0060
ASP 42 0.0064
GLU 43 0.0056
VAL 44 0.0056
VAL 45 0.0067
ASN 46 0.0063
ARG 47 0.0060
ALA 48 0.0064
GLY 49 0.0076
LYS 50 0.0079
LEU 51 0.0077
ALA 52 0.0078
ALA 53 0.0114
LYS 54 0.0120
PHE 55 0.0097
ARG 56 0.0100
ALA 57 0.0155
SER 58 0.0146
GLY 59 0.0133
GLN 60 0.0105
PRO 61 0.0041
VAL 62 0.0041
PHE 63 0.0045
LEU 64 0.0045
VAL 65 0.0041
ARG 66 0.0030
VAL 67 0.0041
GLY 68 0.0044
TRP 69 0.0065
SER 70 0.0083
ALA 71 0.0137
ASP 72 0.0185
TYR 73 0.0137
ALA 74 0.0154
GLU 75 0.0098
ALA 76 0.0090
LEU 77 0.0047
LYS 78 0.0054
GLN 79 0.0037
PRO 80 0.0037
VAL 81 0.0037
ASP 82 0.0030
ALA 83 0.0044
PRO 84 0.0083
SER 85 0.0290
PRO 86 0.0517
ALA 87 0.0444
LYS 88 0.0620
VAL 89 0.0264
LEU 90 0.0253
PRO 91 0.0353
GLU 92 0.0363
ASN 93 0.0207
TRP 94 0.0155
TRP 95 0.0119
GLN 96 0.0162
HIS 97 0.0053
PRO 98 0.0059
ALA 99 0.0059
ALA 100 0.0068
LEU 101 0.0054
GLY 102 0.0058
THR 103 0.0039
THR 104 0.0060
ASP 105 0.0103
SER 106 0.0085
ASP 107 0.0052
ILE 108 0.0057
GLU 109 0.0040
ILE 110 0.0046
ILE 111 0.0045
LYS 112 0.0051
ARG 113 0.0046
GLN 114 0.0039
TRP 115 0.0029
GLY 116 0.0024
ALA 117 0.0051
PHE 118 0.0052
TYR 119 0.0052
GLY 120 0.0051
THR 121 0.0066
ASP 122 0.0062
LEU 123 0.0059
GLU 124 0.0053
LEU 125 0.0072
GLN 126 0.0077
LEU 127 0.0067
ARG 128 0.0057
ARG 129 0.0075
ARG 130 0.0075
GLY 131 0.0072
ILE 132 0.0072
ASP 133 0.0068
THR 134 0.0068
ILE 135 0.0056
VAL 136 0.0057
LEU 137 0.0044
CYS 138 0.0043
GLY 139 0.0042
ILE 140 0.0043
SER 141 0.0033
THR 142 0.0031
ASN 143 0.0035
ILE 144 0.0034
GLY 145 0.0034
VAL 146 0.0026
GLU 147 0.0026
SER 148 0.0027
THR 149 0.0026
ALA 150 0.0021
ARG 151 0.0024
ASN 152 0.0021
ALA 153 0.0025
TRP 154 0.0019
GLU 155 0.0013
LEU 156 0.0014
GLY 157 0.0033
PHE 158 0.0030
ASN 159 0.0033
LEU 160 0.0033
VAL 161 0.0050
ILE 162 0.0044
ALA 163 0.0041
GLU 164 0.0041
ASP 165 0.0048
ALA 166 0.0048
CYS 167 0.0042
SER 168 0.0036
ALA 169 0.0033
ALA 170 0.0035
SER 171 0.0034
ALA 172 0.0033
GLU 173 0.0044
GLN 174 0.0039
HIS 175 0.0036
ASN 176 0.0039
ASN 177 0.0048
SER 178 0.0043
ILE 179 0.0043
ASN 180 0.0047
HIS 181 0.0058
ILE 182 0.0050
TYR 183 0.0045
PRO 184 0.0049
ARG 185 0.0062
ILE 186 0.0050
ALA 187 0.0043
ARG 188 0.0042
VAL 189 0.0053
ARG 190 0.0049
SER 191 0.0044
VAL 192 0.0055
GLU 193 0.0104
GLU 194 0.0108
ILE 195 0.0106
LEU 196 0.0127
ASN 197 0.0171
ALA 198 0.0164
LEU 199 0.0156
MET 12 0.0235
LEU 13 0.0175
GLU 14 0.0184
LEU 15 0.0150
ASN 16 0.0173
ALA 17 0.0144
LYS 18 0.0155
THR 19 0.0130
THR 20 0.0088
ALA 21 0.0064
LEU 22 0.0037
VAL 23 0.0026
VAL 24 0.0035
ILE 25 0.0025
ASP 26 0.0028
LEU 27 0.0038
GLN 28 0.0031
GLU 29 0.0025
GLY 30 0.0029
ILE 31 0.0031
LEU 32 0.0021
PRO 33 0.0012
PHE 34 0.0007
ALA 35 0.0009
GLY 36 0.0021
GLY 37 0.0028
PRO 38 0.0043
HIS 39 0.0053
THR 40 0.0071
ALA 41 0.0067
ASP 42 0.0090
GLU 43 0.0082
VAL 44 0.0066
VAL 45 0.0077
ASN 46 0.0086
ARG 47 0.0065
ALA 48 0.0053
GLY 49 0.0072
LYS 50 0.0052
LEU 51 0.0029
ALA 52 0.0049
ALA 53 0.0059
LYS 54 0.0051
PHE 55 0.0074
ARG 56 0.0099
ALA 57 0.0106
SER 58 0.0128
GLY 59 0.0152
GLN 60 0.0102
PRO 61 0.0076
VAL 62 0.0051
PHE 63 0.0035
LEU 64 0.0046
VAL 65 0.0032
ARG 66 0.0027
VAL 67 0.0026
GLY 68 0.0086
TRP 69 0.0147
SER 70 0.0226
ALA 71 0.0286
ASP 72 0.0245
TYR 73 0.0174
ALA 74 0.0144
GLU 75 0.0088
ALA 76 0.0037
LEU 77 0.0034
LYS 78 0.0057
GLN 79 0.0062
PRO 80 0.0081
VAL 81 0.0074
ASP 82 0.0093
ALA 83 0.0121
PRO 84 0.0232
SER 85 0.0240
PRO 86 0.0263
ALA 87 0.0268
LYS 88 0.0358
VAL 89 0.0332
LEU 90 0.0235
PRO 91 0.0206
GLU 92 0.0137
ASN 93 0.0083
TRP 94 0.0073
TRP 95 0.0062
GLN 96 0.0059
HIS 97 0.0075
PRO 98 0.0083
ALA 99 0.0116
ALA 100 0.0118
LEU 101 0.0099
GLY 102 0.0117
THR 103 0.0118
THR 104 0.0160
ASP 105 0.0199
SER 106 0.0171
ASP 107 0.0105
ILE 108 0.0054
GLU 109 0.0038
ILE 110 0.0031
ILE 111 0.0024
LYS 112 0.0039
ARG 113 0.0041
GLN 114 0.0022
TRP 115 0.0014
GLY 116 0.0014
ALA 117 0.0012
PHE 118 0.0016
TYR 119 0.0021
GLY 120 0.0041
THR 121 0.0028
ASP 122 0.0021
LEU 123 0.0011
GLU 124 0.0026
LEU 125 0.0021
GLN 126 0.0011
LEU 127 0.0011
ARG 128 0.0025
ARG 129 0.0018
ARG 130 0.0032
GLY 131 0.0043
ILE 132 0.0058
ASP 133 0.0064
THR 134 0.0059
ILE 135 0.0039
VAL 136 0.0027
LEU 137 0.0019
CYS 138 0.0022
GLY 139 0.0031
ILE 140 0.0020
SER 141 0.0015
THR 142 0.0012
ASN 143 0.0018
ILE 144 0.0019
GLY 145 0.0014
VAL 146 0.0015
GLU 147 0.0017
SER 148 0.0013
THR 149 0.0015
ALA 150 0.0020
ARG 151 0.0019
ASN 152 0.0025
ALA 153 0.0025
TRP 154 0.0029
GLU 155 0.0031
LEU 156 0.0036
GLY 157 0.0039
PHE 158 0.0038
ASN 159 0.0046
LEU 160 0.0026
VAL 161 0.0029
ILE 162 0.0032
ALA 163 0.0035
GLU 164 0.0042
ASP 165 0.0054
ALA 166 0.0045
CYS 167 0.0040
SER 168 0.0022
ALA 169 0.0006
ALA 170 0.0013
SER 171 0.0014
ALA 172 0.0020
GLU 173 0.0032
GLN 174 0.0025
HIS 175 0.0019
ASN 176 0.0019
ASN 177 0.0022
SER 178 0.0015
ILE 179 0.0017
ASN 180 0.0023
HIS 181 0.0022
ILE 182 0.0018
TYR 183 0.0018
PRO 184 0.0025
ARG 185 0.0034
ILE 186 0.0019
ALA 187 0.0018
ARG 188 0.0052
VAL 189 0.0061
ARG 190 0.0069
SER 191 0.0074
VAL 192 0.0071
GLU 193 0.0096
GLU 194 0.0116
ILE 195 0.0077
LEU 196 0.0071
ASN 197 0.0110
ALA 198 0.0132
LEU 199 0.0112

If you find results from this site helpful for your research, please cite one of our papers:

K. Suhre & Y.H. Sanejouand, ElNemo: a normal mode web-server for protein movement analysis and the generation of templates for molecular replacement. Nucleic Acids Research, 32, W610-W614, 2004.
K. Suhre & Y.H. Sanejouand, On the potential of normal mode analysis for solving difficult molecular replacement problems. Acta Cryst. D vol.60, p796-799, 2004 © International Union of Crystallography.

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.

Should you encounter any unexpected behaviour, please let us know. elNémo has been hacked on november 27th. It has been moved away and runs again. **Still some additional cleaning from time to time** Sorry for the inconvenience.

*** Ecoli yecd ***

<R2> analysis for 251228182821571726

--- normal mode 26 ---

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been hacked on november 27th.
It has been moved away and runs again.
Still some additional cleaning from time to time
Sorry for the inconvenience.

* Ecoli yecd *

<R²> analysis for 251228182821571726