CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  Ecoli yecd  ***

<R2> analysis for 251228182821571726

---  normal mode 30  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0610
MET 120.0561
LEU 130.0384
GLU 140.0355
LEU 150.0193
ASN 160.0138
ALA 170.0075
LYS 180.0101
THR 190.0146
THR 200.0098
ALA 210.0118
LEU 220.0109
VAL 230.0130
VAL 240.0102
ILE 250.0092
ASP 260.0084
LEU 270.0088
GLN 280.0138
GLU 290.0171
GLY 300.0137
ILE 310.0102
LEU 320.0123
PRO 330.0122
PHE 340.0103
ALA 350.0133
GLY 360.0156
GLY 370.0147
PRO 380.0142
HIS 390.0134
THR 400.0140
ALA 410.0133
ASP 420.0137
GLU 430.0116
VAL 440.0091
VAL 450.0109
ASN 460.0100
ARG 470.0087
ALA 480.0122
GLY 490.0181
LYS 500.0180
LEU 510.0156
ALA 520.0194
ALA 530.0259
LYS 540.0208
PHE 550.0167
ARG 560.0238
ALA 570.0265
SER 580.0205
GLY 590.0248
GLN 600.0155
PRO 610.0172
VAL 620.0157
PHE 630.0167
LEU 640.0114
VAL 650.0094
ARG 660.0072
VAL 670.0089
GLY 680.0116
TRP 690.0170
SER 700.0243
ALA 710.0316
ASP 720.0312
TYR 730.0256
ALA 740.0231
GLU 750.0164
ALA 760.0151
LEU 770.0123
LYS 780.0135
GLN 790.0161
PRO 800.0147
VAL 810.0154
ASP 820.0174
ALA 830.0189
PRO 840.0286
SER 850.0201
PRO 860.0234
ALA 870.0358
LYS 880.0345
VAL 890.0381
LEU 900.0305
PRO 910.0329
GLU 920.0342
ASN 930.0294
TRP 940.0202
TRP 950.0177
GLN 960.0092
HIS 970.0093
PRO 980.0106
ALA 990.0136
ALA 1000.0108
LEU 1010.0110
GLY 1020.0149
THR 1030.0158
THR 1040.0325
ASP 1050.0392
SER 1060.0312
ASP 1070.0217
ILE 1080.0159
GLU 1090.0127
ILE 1100.0124
ILE 1110.0104
LYS 1120.0032
ARG 1130.0059
GLN 1140.0038
TRP 1150.0027
GLY 1160.0049
ALA 1170.0065
PHE 1180.0064
TYR 1190.0038
GLY 1200.0039
THR 1210.0055
ASP 1220.0091
LEU 1230.0118
GLU 1240.0123
LEU 1250.0124
GLN 1260.0131
LEU 1270.0139
ARG 1280.0127
ARG 1290.0132
ARG 1300.0135
GLY 1310.0140
ILE 1320.0139
ASP 1330.0134
THR 1340.0101
ILE 1350.0095
VAL 1360.0065
LEU 1370.0079
CYS 1380.0084
GLY 1390.0099
ILE 1400.0082
SER 1410.0083
THR 1420.0087
ASN 1430.0088
ILE 1440.0063
GLY 1450.0057
VAL 1460.0064
GLU 1470.0066
SER 1480.0056
THR 1490.0059
ALA 1500.0056
ARG 1510.0055
ASN 1520.0080
ALA 1530.0080
TRP 1540.0079
GLU 1550.0082
LEU 1560.0118
GLY 1570.0113
PHE 1580.0105
ASN 1590.0096
LEU 1600.0079
VAL 1610.0052
ILE 1620.0053
ALA 1630.0051
GLU 1640.0065
ASP 1650.0089
ALA 1660.0101
CYS 1670.0108
SER 1680.0116
ALA 1690.0114
ALA 1700.0122
SER 1710.0138
ALA 1720.0147
GLU 1730.0151
GLN 1740.0109
HIS 1750.0101
ASN 1760.0100
ASN 1770.0098
SER 1780.0072
ILE 1790.0079
ASN 1800.0071
HIS 1810.0073
ILE 1820.0066
TYR 1830.0052
PRO 1840.0062
ARG 1850.0063
ILE 1860.0064
ALA 1870.0064
ARG 1880.0106
VAL 1890.0062
ARG 1900.0057
SER 1910.0089
VAL 1920.0184
GLU 1930.0286
GLU 1940.0251
ILE 1950.0158
LEU 1960.0269
ASN 1970.0362
ALA 1980.0279
LEU 1990.0200
LEU 150.0129
ASN 160.0148
ALA 170.0114
LYS 180.0129
THR 190.0101
THR 200.0067
ALA 210.0047
LEU 220.0028
VAL 230.0041
VAL 240.0046
ILE 250.0061
ASP 260.0070
LEU 270.0075
GLN 280.0061
GLU 290.0078
GLY 300.0088
ILE 310.0140
LEU 320.0149
PRO 330.0197
PHE 340.0204
ALA 350.0161
GLY 360.0176
GLY 370.0130
PRO 380.0099
HIS 390.0125
THR 400.0160
ALA 410.0156
ASP 420.0163
GLU 430.0140
VAL 440.0106
VAL 450.0103
ASN 460.0113
ARG 470.0099
ALA 480.0070
GLY 490.0085
LYS 500.0094
LEU 510.0068
ALA 520.0056
ALA 530.0099
LYS 540.0105
PHE 550.0066
ARG 560.0076
ALA 570.0121
SER 580.0121
GLY 590.0082
GLN 600.0061
PRO 610.0040
VAL 620.0023
PHE 630.0025
LEU 640.0031
VAL 650.0043
ARG 660.0058
VAL 670.0074
GLY 680.0069
TRP 690.0093
SER 700.0110
ALA 710.0124
ASP 720.0136
TYR 730.0128
ALA 740.0140
GLU 750.0114
ALA 760.0111
LEU 770.0111
LYS 780.0113
GLN 790.0098
PRO 800.0075
VAL 810.0071
ASP 820.0067
ALA 830.0071
PRO 840.0122
SER 850.0165
PRO 860.0193
ALA 870.0154
LYS 880.0107
VAL 890.0116
LEU 900.0080
PRO 910.0059
GLU 920.0093
ASN 930.0051
TRP 940.0034
TRP 950.0047
GLN 960.0036
HIS 970.0043
PRO 980.0061
ALA 990.0086
ALA 1000.0089
LEU 1010.0070
GLY 1020.0066
THR 1030.0044
THR 1040.0026
ASP 1050.0027
SER 1060.0033
ASP 1070.0028
ILE 1080.0036
GLU 1090.0044
ILE 1100.0047
ILE 1110.0055
LYS 1120.0055
ARG 1130.0064
GLN 1140.0061
TRP 1150.0040
GLY 1160.0030
ALA 1170.0039
PHE 1180.0037
TYR 1190.0057
GLY 1200.0054
THR 1210.0024
ASP 1220.0036
LEU 1230.0056
GLU 1240.0056
LEU 1250.0063
GLN 1260.0076
LEU 1270.0089
ARG 1280.0086
ARG 1290.0089
ARG 1300.0101
GLY 1310.0088
ILE 1320.0082
ASP 1330.0109
THR 1340.0088
ILE 1350.0066
VAL 1360.0047
LEU 1370.0062
CYS 1380.0066
GLY 1390.0072
ILE 1400.0093
SER 1410.0103
THR 1420.0091
ASN 1430.0081
ILE 1440.0072
GLY 1450.0071
VAL 1460.0081
GLU 1470.0074
SER 1480.0064
THR 1490.0071
ALA 1500.0076
ARG 1510.0066
ASN 1520.0072
ALA 1530.0084
TRP 1540.0071
GLU 1550.0061
LEU 1560.0072
GLY 1570.0082
PHE 1580.0099
ASN 1590.0099
LEU 1600.0095
VAL 1610.0085
ILE 1620.0085
ALA 1630.0046
GLU 1640.0066
ASP 1650.0072
ALA 1660.0080
CYS 1670.0082
SER 1680.0098
ALA 1690.0115
ALA 1700.0133
SER 1710.0085
ALA 1720.0091
GLU 1730.0116
GLN 1740.0103
HIS 1750.0090
ASN 1760.0096
ASN 1770.0108
SER 1780.0103
ILE 1790.0102
ASN 1800.0112
HIS 1810.0110
ILE 1820.0100
TYR 1830.0111
PRO 1840.0116
ARG 1850.0108
ILE 1860.0106
ALA 1870.0128
ARG 1880.0107
VAL 1890.0102
ARG 1900.0082
SER 1910.0057
VAL 1920.0055
GLU 1930.0099
GLU 1940.0061
ILE 1950.0057
LEU 1960.0110
ASN 1970.0149
ALA 1980.0142
LEU 1990.0126
LEU 130.0198
GLU 140.0248
LEU 150.0186
ASN 160.0200
ALA 170.0134
LYS 180.0137
THR 190.0135
THR 200.0089
ALA 210.0060
LEU 220.0039
VAL 230.0051
VAL 240.0050
ILE 250.0050
ASP 260.0054
LEU 270.0049
GLN 280.0056
GLU 290.0085
GLY 300.0093
ILE 310.0106
LEU 320.0119
PRO 330.0165
PHE 340.0154
ALA 350.0117
GLY 360.0139
GLY 370.0109
PRO 380.0084
HIS 390.0069
THR 400.0099
ALA 410.0121
ASP 420.0124
GLU 430.0085
VAL 440.0062
VAL 450.0083
ASN 460.0091
ARG 470.0062
ALA 480.0044
GLY 490.0087
LYS 500.0090
LEU 510.0055
ALA 520.0050
ALA 530.0101
LYS 540.0105
PHE 550.0068
ARG 560.0069
ALA 570.0125
SER 580.0118
GLY 590.0085
GLN 600.0065
PRO 610.0050
VAL 620.0037
PHE 630.0054
LEU 640.0058
VAL 650.0039
ARG 660.0032
VAL 670.0031
GLY 680.0030
TRP 690.0081
SER 700.0118
ALA 710.0152
ASP 720.0181
TYR 730.0135
ALA 740.0127
GLU 750.0101
ALA 760.0122
LEU 770.0093
LYS 780.0087
GLN 790.0083
PRO 800.0075
VAL 810.0075
ASP 820.0071
ALA 830.0101
PRO 840.0122
SER 850.0303
PRO 860.0294
ALA 870.0232
LYS 880.0200
VAL 890.0098
LEU 900.0059
PRO 910.0029
GLU 920.0063
ASN 930.0032
TRP 940.0029
TRP 950.0016
GLN 960.0036
HIS 970.0063
PRO 980.0071
ALA 990.0074
ALA 1000.0065
LEU 1010.0065
GLY 1020.0076
THR 1030.0067
THR 1040.0062
ASP 1050.0077
SER 1060.0059
ASP 1070.0050
ILE 1080.0074
GLU 1090.0050
ILE 1100.0039
ILE 1110.0032
LYS 1120.0025
ARG 1130.0038
GLN 1140.0035
TRP 1150.0023
GLY 1160.0031
ALA 1170.0040
PHE 1180.0027
TYR 1190.0031
GLY 1200.0039
THR 1210.0049
ASP 1220.0062
LEU 1230.0065
GLU 1240.0065
LEU 1250.0095
GLN 1260.0100
LEU 1270.0103
ARG 1280.0097
ARG 1290.0119
ARG 1300.0108
GLY 1310.0108
ILE 1320.0111
ASP 1330.0147
THR 1340.0118
ILE 1350.0093
VAL 1360.0060
LEU 1370.0058
CYS 1380.0049
GLY 1390.0061
ILE 1400.0080
SER 1410.0077
THR 1420.0087
ASN 1430.0080
ILE 1440.0065
GLY 1450.0058
VAL 1460.0071
GLU 1470.0072
SER 1480.0057
THR 1490.0070
ALA 1500.0064
ARG 1510.0058
ASN 1520.0063
ALA 1530.0095
TRP 1540.0088
GLU 1550.0068
LEU 1560.0074
GLY 1570.0110
PHE 1580.0109
ASN 1590.0111
LEU 1600.0113
VAL 1610.0101
ILE 1620.0086
ALA 1630.0057
GLU 1640.0054
ASP 1650.0019
ALA 1660.0027
CYS 1670.0057
SER 1680.0081
ALA 1690.0094
ALA 1700.0108
SER 1710.0106
ALA 1720.0098
GLU 1730.0101
GLN 1740.0096
HIS 1750.0096
ASN 1760.0102
ASN 1770.0109
SER 1780.0111
ILE 1790.0112
ASN 1800.0107
HIS 1810.0113
ILE 1820.0111
TYR 1830.0113
PRO 1840.0114
ARG 1850.0114
ILE 1860.0124
ALA 1870.0125
ARG 1880.0123
VAL 1890.0098
ARG 1900.0057
SER 1910.0018
VAL 1920.0035
GLU 1930.0118
GLU 1940.0120
ILE 1950.0108
LEU 1960.0141
ASN 1970.0207
ALA 1980.0202
LEU 1990.0172
MET 120.0610
LEU 130.0393
GLU 140.0415
LEU 150.0229
ASN 160.0119
ALA 170.0069
LYS 180.0028
THR 190.0082
THR 200.0050
ALA 210.0066
LEU 220.0062
VAL 230.0087
VAL 240.0073
ILE 250.0064
ASP 260.0062
LEU 270.0072
GLN 280.0126
GLU 290.0157
GLY 300.0127
ILE 310.0087
LEU 320.0099
PRO 330.0097
PHE 340.0074
ALA 350.0101
GLY 360.0108
GLY 370.0109
PRO 380.0114
HIS 390.0107
THR 400.0123
ALA 410.0116
ASP 420.0120
GLU 430.0098
VAL 440.0068
VAL 450.0083
ASN 460.0073
ARG 470.0054
ALA 480.0081
GLY 490.0134
LYS 500.0132
LEU 510.0101
ALA 520.0134
ALA 530.0198
LYS 540.0164
PHE 550.0112
ARG 560.0163
ALA 570.0193
SER 580.0141
GLY 590.0165
GLN 600.0091
PRO 610.0110
VAL 620.0102
PHE 630.0121
LEU 640.0085
VAL 650.0067
ARG 660.0058
VAL 670.0070
GLY 680.0107
TRP 690.0156
SER 700.0231
ALA 710.0298
ASP 720.0300
TYR 730.0232
ALA 740.0206
GLU 750.0128
ALA 760.0114
LEU 770.0106
LYS 780.0139
GLN 790.0165
PRO 800.0143
VAL 810.0147
ASP 820.0159
ALA 830.0160
PRO 840.0230
SER 850.0156
PRO 860.0208
ALA 870.0296
LYS 880.0286
VAL 890.0319
LEU 900.0267
PRO 910.0282
GLU 920.0304
ASN 930.0262
TRP 940.0186
TRP 950.0167
GLN 960.0097
HIS 970.0096
PRO 980.0106
ALA 990.0133
ALA 1000.0058
LEU 1010.0055
GLY 1020.0077
THR 1030.0085
THR 1040.0249
ASP 1050.0322
SER 1060.0241
ASP 1070.0143
ILE 1080.0116
GLU 1090.0094
ILE 1100.0091
ILE 1110.0078
LYS 1120.0032
ARG 1130.0041
GLN 1140.0029
TRP 1150.0033
GLY 1160.0042
ALA 1170.0057
PHE 1180.0057
TYR 1190.0033
GLY 1200.0037
THR 1210.0055
ASP 1220.0086
LEU 1230.0103
GLU 1240.0121
LEU 1250.0121
GLN 1260.0120
LEU 1270.0120
ARG 1280.0117
ARG 1290.0116
ARG 1300.0113
GLY 1310.0109
ILE 1320.0093
ASP 1330.0101
THR 1340.0075
ILE 1350.0068
VAL 1360.0038
LEU 1370.0055
CYS 1380.0059
GLY 1390.0076
ILE 1400.0058
SER 1410.0056
THR 1420.0067
ASN 1430.0066
ILE 1440.0046
GLY 1450.0040
VAL 1460.0046
GLU 1470.0049
SER 1480.0041
THR 1490.0044
ALA 1500.0043
ARG 1510.0042
ASN 1520.0066
ALA 1530.0066
TRP 1540.0066
GLU 1550.0067
LEU 1560.0107
GLY 1570.0099
PHE 1580.0088
ASN 1590.0077
LEU 1600.0076
VAL 1610.0052
ILE 1620.0045
ALA 1630.0026
GLU 1640.0048
ASP 1650.0064
ALA 1660.0069
CYS 1670.0079
SER 1680.0085
ALA 1690.0075
ALA 1700.0072
SER 1710.0092
ALA 1720.0093
GLU 1730.0101
GLN 1740.0079
HIS 1750.0080
ASN 1760.0077
ASN 1770.0080
SER 1780.0059
ILE 1790.0064
ASN 1800.0055
HIS 1810.0059
ILE 1820.0057
TYR 1830.0046
PRO 1840.0062
ARG 1850.0069
ILE 1860.0068
ALA 1870.0063
ARG 1880.0119
VAL 1890.0072
ARG 1900.0052
SER 1910.0059
VAL 1920.0129
GLU 1930.0225
GLU 1940.0216
ILE 1950.0149
LEU 1960.0242
ASN 1970.0333
ALA 1980.0280
LEU 1990.0211

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.