CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  Ecoli yecd  ***

<R2> analysis for 251228182821571726

---  normal mode 33  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0758
MET 120.0238
LEU 130.0204
GLU 140.0217
LEU 150.0192
ASN 160.0283
ALA 170.0227
LYS 180.0242
THR 190.0192
THR 200.0125
ALA 210.0075
LEU 220.0056
VAL 230.0089
VAL 240.0117
ILE 250.0121
ASP 260.0121
LEU 270.0121
GLN 280.0126
GLU 290.0125
GLY 300.0130
ILE 310.0132
LEU 320.0175
PRO 330.0224
PHE 340.0255
ALA 350.0258
GLY 360.0262
GLY 370.0252
PRO 380.0251
HIS 390.0236
THR 400.0279
ALA 410.0240
ASP 420.0237
GLU 430.0248
VAL 440.0212
VAL 450.0191
ASN 460.0208
ARG 470.0194
ALA 480.0161
GLY 490.0175
LYS 500.0157
LEU 510.0106
ALA 520.0118
ALA 530.0161
LYS 540.0119
PHE 550.0112
ARG 560.0161
ALA 570.0201
SER 580.0197
GLY 590.0219
GLN 600.0136
PRO 610.0085
VAL 620.0061
PHE 630.0068
LEU 640.0102
VAL 650.0093
ARG 660.0089
VAL 670.0084
GLY 680.0051
TRP 690.0091
SER 700.0172
ALA 710.0256
ASP 720.0274
TYR 730.0212
ALA 740.0225
GLU 750.0140
ALA 760.0089
LEU 770.0058
LYS 780.0081
GLN 790.0048
PRO 800.0060
VAL 810.0040
ASP 820.0033
ALA 830.0045
PRO 840.0159
SER 850.0293
PRO 860.0424
ALA 870.0510
LYS 880.0695
VAL 890.0464
LEU 900.0255
PRO 910.0353
GLU 920.0320
ASN 930.0294
TRP 940.0204
TRP 950.0199
GLN 960.0133
HIS 970.0112
PRO 980.0108
ALA 990.0156
ALA 1000.0186
LEU 1010.0132
GLY 1020.0125
THR 1030.0091
THR 1040.0169
ASP 1050.0217
SER 1060.0175
ASP 1070.0070
ILE 1080.0055
GLU 1090.0070
ILE 1100.0079
ILE 1110.0098
LYS 1120.0063
ARG 1130.0044
GLN 1140.0047
TRP 1150.0064
GLY 1160.0061
ALA 1170.0063
PHE 1180.0060
TYR 1190.0051
GLY 1200.0066
THR 1210.0061
ASP 1220.0056
LEU 1230.0059
GLU 1240.0049
LEU 1250.0035
GLN 1260.0035
LEU 1270.0050
ARG 1280.0056
ARG 1290.0045
ARG 1300.0066
GLY 1310.0088
ILE 1320.0084
ASP 1330.0122
THR 1340.0107
ILE 1350.0079
VAL 1360.0072
LEU 1370.0102
CYS 1380.0120
GLY 1390.0151
ILE 1400.0148
SER 1410.0149
THR 1420.0128
ASN 1430.0133
ILE 1440.0104
GLY 1450.0112
VAL 1460.0097
GLU 1470.0091
SER 1480.0063
THR 1490.0071
ALA 1500.0050
ARG 1510.0056
ASN 1520.0057
ALA 1530.0056
TRP 1540.0055
GLU 1550.0066
LEU 1560.0079
GLY 1570.0082
PHE 1580.0092
ASN 1590.0105
LEU 1600.0088
VAL 1610.0071
ILE 1620.0095
ALA 1630.0094
GLU 1640.0161
ASP 1650.0174
ALA 1660.0166
CYS 1670.0178
SER 1680.0197
ALA 1690.0205
ALA 1700.0227
SER 1710.0232
ALA 1720.0182
GLU 1730.0194
GLN 1740.0173
HIS 1750.0161
ASN 1760.0118
ASN 1770.0112
SER 1780.0094
ILE 1790.0099
ASN 1800.0062
HIS 1810.0058
ILE 1820.0058
TYR 1830.0065
PRO 1840.0049
ARG 1850.0066
ILE 1860.0062
ALA 1870.0096
ARG 1880.0101
VAL 1890.0105
ARG 1900.0079
SER 1910.0077
VAL 1920.0120
GLU 1930.0095
GLU 1940.0102
ILE 1950.0088
LEU 1960.0094
ASN 1970.0107
ALA 1980.0147
LEU 1990.0150
LEU 150.0119
ASN 160.0107
ALA 170.0076
LYS 180.0093
THR 190.0068
THR 200.0062
ALA 210.0080
LEU 220.0101
VAL 230.0112
VAL 240.0118
ILE 250.0119
ASP 260.0123
LEU 270.0149
GLN 280.0115
GLU 290.0118
GLY 300.0117
ILE 310.0083
LEU 320.0054
PRO 330.0048
PHE 340.0061
ALA 350.0115
GLY 360.0122
GLY 370.0110
PRO 380.0103
HIS 390.0138
THR 400.0147
ALA 410.0160
ASP 420.0143
GLU 430.0145
VAL 440.0154
VAL 450.0158
ASN 460.0144
ARG 470.0147
ALA 480.0166
GLY 490.0163
LYS 500.0145
LEU 510.0133
ALA 520.0158
ALA 530.0151
LYS 540.0121
PHE 550.0114
ARG 560.0146
ALA 570.0139
SER 580.0114
GLY 590.0116
GLN 600.0093
PRO 610.0108
VAL 620.0133
PHE 630.0130
LEU 640.0142
VAL 650.0143
ARG 660.0152
VAL 670.0111
GLY 680.0112
TRP 690.0129
SER 700.0138
ALA 710.0195
ASP 720.0222
TYR 730.0158
ALA 740.0191
GLU 750.0107
ALA 760.0106
LEU 770.0105
LYS 780.0106
GLN 790.0081
PRO 800.0108
VAL 810.0097
ASP 820.0123
ALA 830.0106
PRO 840.0336
SER 850.0539
PRO 860.0755
ALA 870.0479
LYS 880.0286
VAL 890.0099
LEU 900.0312
PRO 910.0643
GLU 920.0758
ASN 930.0524
TRP 940.0261
TRP 950.0153
GLN 960.0172
HIS 970.0167
PRO 980.0124
ALA 990.0210
ALA 1000.0193
LEU 1010.0192
GLY 1020.0191
THR 1030.0210
THR 1040.0223
ASP 1050.0276
SER 1060.0203
ASP 1070.0142
ILE 1080.0132
GLU 1090.0150
ILE 1100.0147
ILE 1110.0112
LYS 1120.0107
ARG 1130.0104
GLN 1140.0098
TRP 1150.0039
GLY 1160.0043
ALA 1170.0053
PHE 1180.0066
TYR 1190.0063
GLY 1200.0061
THR 1210.0064
ASP 1220.0073
LEU 1230.0048
GLU 1240.0042
LEU 1250.0032
GLN 1260.0026
LEU 1270.0035
ARG 1280.0038
ARG 1290.0039
ARG 1300.0043
GLY 1310.0046
ILE 1320.0042
ASP 1330.0048
THR 1340.0050
ILE 1350.0049
VAL 1360.0063
LEU 1370.0076
CYS 1380.0096
GLY 1390.0076
ILE 1400.0094
SER 1410.0101
THR 1420.0083
ASN 1430.0060
ILE 1440.0067
GLY 1450.0060
VAL 1460.0045
GLU 1470.0016
SER 1480.0028
THR 1490.0023
ALA 1500.0012
ARG 1510.0023
ASN 1520.0016
ALA 1530.0025
TRP 1540.0017
GLU 1550.0020
LEU 1560.0013
GLY 1570.0008
PHE 1580.0012
ASN 1590.0027
LEU 1600.0032
VAL 1610.0047
ILE 1620.0055
ALA 1630.0090
GLU 1640.0109
ASP 1650.0109
ALA 1660.0113
CYS 1670.0098
SER 1680.0109
ALA 1690.0112
ALA 1700.0125
SER 1710.0175
ALA 1720.0157
GLU 1730.0152
GLN 1740.0120
HIS 1750.0105
ASN 1760.0108
ASN 1770.0106
SER 1780.0074
ILE 1790.0074
ASN 1800.0105
HIS 1810.0090
ILE 1820.0054
TYR 1830.0020
PRO 1840.0021
ARG 1850.0018
ILE 1860.0015
ALA 1870.0031
ARG 1880.0052
VAL 1890.0068
ARG 1900.0084
SER 1910.0123
VAL 1920.0108
GLU 1930.0105
GLU 1940.0102
ILE 1950.0097
LEU 1960.0095
ASN 1970.0117
ALA 1980.0114
LEU 1990.0091
LEU 130.0038
GLU 140.0035
LEU 150.0034
ASN 160.0035
ALA 170.0048
LYS 180.0049
THR 190.0039
THR 200.0045
ALA 210.0053
LEU 220.0058
VAL 230.0065
VAL 240.0074
ILE 250.0063
ASP 260.0069
LEU 270.0078
GLN 280.0079
GLU 290.0091
GLY 300.0079
ILE 310.0092
LEU 320.0112
PRO 330.0107
PHE 340.0098
ALA 350.0086
GLY 360.0088
GLY 370.0074
PRO 380.0073
HIS 390.0074
THR 400.0075
ALA 410.0097
ASP 420.0095
GLU 430.0086
VAL 440.0086
VAL 450.0099
ASN 460.0093
ARG 470.0084
ALA 480.0088
GLY 490.0105
LYS 500.0089
LEU 510.0080
ALA 520.0096
ALA 530.0107
LYS 540.0090
PHE 550.0085
ARG 560.0104
ALA 570.0125
SER 580.0098
GLY 590.0094
GLN 600.0075
PRO 610.0057
VAL 620.0064
PHE 630.0071
LEU 640.0085
VAL 650.0060
ARG 660.0052
VAL 670.0047
GLY 680.0038
TRP 690.0014
SER 700.0034
ALA 710.0060
ASP 720.0067
TYR 730.0049
ALA 740.0046
GLU 750.0038
ALA 760.0047
LEU 770.0024
LYS 780.0026
GLN 790.0039
PRO 800.0041
VAL 810.0079
ASP 820.0095
ALA 830.0112
PRO 840.0121
SER 850.0129
PRO 860.0154
ALA 870.0144
LYS 880.0196
VAL 890.0101
LEU 900.0068
PRO 910.0080
GLU 920.0103
ASN 930.0062
TRP 940.0045
TRP 950.0052
GLN 960.0075
HIS 970.0098
PRO 980.0104
ALA 990.0102
ALA 1000.0095
LEU 1010.0093
GLY 1020.0099
THR 1030.0109
THR 1040.0121
ASP 1050.0168
SER 1060.0130
ASP 1070.0089
ILE 1080.0081
GLU 1090.0059
ILE 1100.0056
ILE 1110.0056
LYS 1120.0054
ARG 1130.0019
GLN 1140.0022
TRP 1150.0032
GLY 1160.0038
ALA 1170.0045
PHE 1180.0041
TYR 1190.0035
GLY 1200.0030
THR 1210.0054
ASP 1220.0050
LEU 1230.0042
GLU 1240.0043
LEU 1250.0049
GLN 1260.0059
LEU 1270.0049
ARG 1280.0042
ARG 1290.0055
ARG 1300.0067
GLY 1310.0050
ILE 1320.0047
ASP 1330.0032
THR 1340.0033
ILE 1350.0042
VAL 1360.0046
LEU 1370.0041
CYS 1380.0049
GLY 1390.0057
ILE 1400.0065
SER 1410.0029
THR 1420.0035
ASN 1430.0031
ILE 1440.0029
GLY 1450.0033
VAL 1460.0025
GLU 1470.0026
SER 1480.0034
THR 1490.0029
ALA 1500.0019
ARG 1510.0026
ASN 1520.0039
ALA 1530.0043
TRP 1540.0041
GLU 1550.0042
LEU 1560.0054
GLY 1570.0050
PHE 1580.0053
ASN 1590.0053
LEU 1600.0048
VAL 1610.0039
ILE 1620.0044
ALA 1630.0044
GLU 1640.0046
ASP 1650.0064
ALA 1660.0064
CYS 1670.0064
SER 1680.0064
ALA 1690.0058
ALA 1700.0061
SER 1710.0065
ALA 1720.0070
GLU 1730.0060
GLN 1740.0044
HIS 1750.0045
ASN 1760.0065
ASN 1770.0039
SER 1780.0030
ILE 1790.0038
ASN 1800.0056
HIS 1810.0057
ILE 1820.0048
TYR 1830.0041
PRO 1840.0054
ARG 1850.0062
ILE 1860.0050
ALA 1870.0045
ARG 1880.0046
VAL 1890.0046
ARG 1900.0032
SER 1910.0030
VAL 1920.0045
GLU 1930.0050
GLU 1940.0042
ILE 1950.0053
LEU 1960.0069
ASN 1970.0066
ALA 1980.0065
LEU 1990.0076
MET 120.0070
LEU 130.0069
GLU 140.0060
LEU 150.0060
ASN 160.0049
ALA 170.0059
LYS 180.0054
THR 190.0033
THR 200.0046
ALA 210.0054
LEU 220.0065
VAL 230.0072
VAL 240.0066
ILE 250.0063
ASP 260.0055
LEU 270.0052
GLN 280.0021
GLU 290.0021
GLY 300.0024
ILE 310.0033
LEU 320.0069
PRO 330.0084
PHE 340.0090
ALA 350.0099
GLY 360.0106
GLY 370.0097
PRO 380.0091
HIS 390.0093
THR 400.0121
ALA 410.0118
ASP 420.0121
GLU 430.0115
VAL 440.0106
VAL 450.0106
ASN 460.0108
ARG 470.0102
ALA 480.0107
GLY 490.0112
LYS 500.0107
LEU 510.0099
ALA 520.0107
ALA 530.0117
LYS 540.0102
PHE 550.0087
ARG 560.0097
ALA 570.0104
SER 580.0085
GLY 590.0079
GLN 600.0057
PRO 610.0058
VAL 620.0073
PHE 630.0078
LEU 640.0059
VAL 650.0051
ARG 660.0034
VAL 670.0037
GLY 680.0039
TRP 690.0077
SER 700.0106
ALA 710.0140
ASP 720.0131
TYR 730.0112
ALA 740.0118
GLU 750.0086
ALA 760.0061
LEU 770.0066
LYS 780.0095
GLN 790.0098
PRO 800.0133
VAL 810.0106
ASP 820.0100
ALA 830.0120
PRO 840.0256
SER 850.0293
PRO 860.0393
ALA 870.0409
LYS 880.0350
VAL 890.0233
LEU 900.0176
PRO 910.0218
GLU 920.0188
ASN 930.0153
TRP 940.0101
TRP 950.0062
GLN 960.0039
HIS 970.0032
PRO 980.0032
ALA 990.0072
ALA 1000.0077
LEU 1010.0073
GLY 1020.0071
THR 1030.0069
THR 1040.0145
ASP 1050.0187
SER 1060.0149
ASP 1070.0087
ILE 1080.0072
GLU 1090.0065
ILE 1100.0063
ILE 1110.0059
LYS 1120.0030
ARG 1130.0034
GLN 1140.0030
TRP 1150.0019
GLY 1160.0007
ALA 1170.0017
PHE 1180.0026
TYR 1190.0028
GLY 1200.0030
THR 1210.0036
ASP 1220.0047
LEU 1230.0044
GLU 1240.0040
LEU 1250.0053
GLN 1260.0052
LEU 1270.0037
ARG 1280.0043
ARG 1290.0060
ARG 1300.0052
GLY 1310.0041
ILE 1320.0022
ASP 1330.0022
THR 1340.0028
ILE 1350.0044
VAL 1360.0064
LEU 1370.0066
CYS 1380.0070
GLY 1390.0075
ILE 1400.0069
SER 1410.0065
THR 1420.0049
ASN 1430.0053
ILE 1440.0038
GLY 1450.0043
VAL 1460.0038
GLU 1470.0034
SER 1480.0023
THR 1490.0032
ALA 1500.0035
ARG 1510.0032
ASN 1520.0026
ALA 1530.0030
TRP 1540.0033
GLU 1550.0033
LEU 1560.0026
GLY 1570.0030
PHE 1580.0031
ASN 1590.0033
LEU 1600.0053
VAL 1610.0055
ILE 1620.0068
ALA 1630.0074
GLU 1640.0076
ASP 1650.0084
ALA 1660.0085
CYS 1670.0087
SER 1680.0081
ALA 1690.0085
ALA 1700.0094
SER 1710.0082
ALA 1720.0065
GLU 1730.0070
GLN 1740.0067
HIS 1750.0059
ASN 1760.0053
ASN 1770.0052
SER 1780.0042
ILE 1790.0046
ASN 1800.0059
HIS 1810.0048
ILE 1820.0037
TYR 1830.0047
PRO 1840.0065
ARG 1850.0065
ILE 1860.0055
ALA 1870.0055
ARG 1880.0071
VAL 1890.0083
ARG 1900.0080
SER 1910.0091
VAL 1920.0105
GLU 1930.0107
GLU 1940.0094
ILE 1950.0085
LEU 1960.0104
ASN 1970.0098
ALA 1980.0081
LEU 1990.0084

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.