CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  Ecoli yecd  ***

<R2> analysis for 251228182821571726

---  normal mode 42  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0636
MET 120.0170
LEU 130.0112
GLU 140.0150
LEU 150.0166
ASN 160.0183
ALA 170.0182
LYS 180.0218
THR 190.0188
THR 200.0113
ALA 210.0084
LEU 220.0055
VAL 230.0041
VAL 240.0036
ILE 250.0029
ASP 260.0028
LEU 270.0037
GLN 280.0056
GLU 290.0052
GLY 300.0024
ILE 310.0039
LEU 320.0107
PRO 330.0144
PHE 340.0127
ALA 350.0141
GLY 360.0145
GLY 370.0138
PRO 380.0139
HIS 390.0150
THR 400.0150
ALA 410.0125
ASP 420.0137
GLU 430.0147
VAL 440.0091
VAL 450.0082
ASN 460.0088
ARG 470.0094
ALA 480.0048
GLY 490.0048
LYS 500.0042
LEU 510.0056
ALA 520.0055
ALA 530.0068
LYS 540.0093
PHE 550.0088
ARG 560.0096
ALA 570.0153
SER 580.0170
GLY 590.0145
GLN 600.0104
PRO 610.0069
VAL 620.0049
PHE 630.0018
LEU 640.0049
VAL 650.0040
ARG 660.0040
VAL 670.0038
GLY 680.0096
TRP 690.0107
SER 700.0131
ALA 710.0141
ASP 720.0166
TYR 730.0134
ALA 740.0144
GLU 750.0120
ALA 760.0092
LEU 770.0068
LYS 780.0073
GLN 790.0064
PRO 800.0050
VAL 810.0053
ASP 820.0079
ALA 830.0114
PRO 840.0165
SER 850.0237
PRO 860.0251
ALA 870.0270
LYS 880.0280
VAL 890.0190
LEU 900.0099
PRO 910.0104
GLU 920.0063
ASN 930.0068
TRP 940.0052
TRP 950.0062
GLN 960.0056
HIS 970.0064
PRO 980.0071
ALA 990.0091
ALA 1000.0056
LEU 1010.0056
GLY 1020.0081
THR 1030.0079
THR 1040.0156
ASP 1050.0198
SER 1060.0159
ASP 1070.0063
ILE 1080.0053
GLU 1090.0057
ILE 1100.0050
ILE 1110.0054
LYS 1120.0061
ARG 1130.0054
GLN 1140.0032
TRP 1150.0017
GLY 1160.0010
ALA 1170.0014
PHE 1180.0016
TYR 1190.0021
GLY 1200.0040
THR 1210.0032
ASP 1220.0030
LEU 1230.0019
GLU 1240.0024
LEU 1250.0017
GLN 1260.0021
LEU 1270.0024
ARG 1280.0039
ARG 1290.0039
ARG 1300.0065
GLY 1310.0080
ILE 1320.0109
ASP 1330.0120
THR 1340.0096
ILE 1350.0066
VAL 1360.0067
LEU 1370.0063
CYS 1380.0056
GLY 1390.0063
ILE 1400.0073
SER 1410.0069
THR 1420.0072
ASN 1430.0063
ILE 1440.0054
GLY 1450.0054
VAL 1460.0052
GLU 1470.0042
SER 1480.0034
THR 1490.0033
ALA 1500.0023
ARG 1510.0025
ASN 1520.0027
ALA 1530.0027
TRP 1540.0022
GLU 1550.0021
LEU 1560.0058
GLY 1570.0058
PHE 1580.0064
ASN 1590.0073
LEU 1600.0080
VAL 1610.0083
ILE 1620.0074
ALA 1630.0083
GLU 1640.0081
ASP 1650.0087
ALA 1660.0096
CYS 1670.0092
SER 1680.0120
ALA 1690.0108
ALA 1700.0122
SER 1710.0120
ALA 1720.0110
GLU 1730.0087
GLN 1740.0080
HIS 1750.0088
ASN 1760.0070
ASN 1770.0054
SER 1780.0057
ILE 1790.0078
ASN 1800.0066
HIS 1810.0065
ILE 1820.0055
TYR 1830.0065
PRO 1840.0092
ARG 1850.0081
ILE 1860.0063
ALA 1870.0099
ARG 1880.0105
VAL 1890.0108
ARG 1900.0118
SER 1910.0126
VAL 1920.0081
GLU 1930.0146
GLU 1940.0132
ILE 1950.0109
LEU 1960.0143
ASN 1970.0171
ALA 1980.0148
LEU 1990.0180
LEU 150.0149
ASN 160.0151
ALA 170.0128
LYS 180.0140
THR 190.0081
THR 200.0060
ALA 210.0033
LEU 220.0018
VAL 230.0036
VAL 240.0042
ILE 250.0041
ASP 260.0043
LEU 270.0067
GLN 280.0061
GLU 290.0044
GLY 300.0061
ILE 310.0042
LEU 320.0046
PRO 330.0098
PHE 340.0095
ALA 350.0076
GLY 360.0109
GLY 370.0119
PRO 380.0134
HIS 390.0098
THR 400.0097
ALA 410.0084
ASP 420.0102
GLU 430.0113
VAL 440.0100
VAL 450.0101
ASN 460.0121
ARG 470.0077
ALA 480.0073
GLY 490.0078
LYS 500.0076
LEU 510.0011
ALA 520.0052
ALA 530.0058
LYS 540.0057
PHE 550.0062
ARG 560.0084
ALA 570.0098
SER 580.0122
GLY 590.0085
GLN 600.0067
PRO 610.0043
VAL 620.0017
PHE 630.0060
LEU 640.0066
VAL 650.0061
ARG 660.0063
VAL 670.0100
GLY 680.0111
TRP 690.0132
SER 700.0169
ALA 710.0249
ASP 720.0229
TYR 730.0136
ALA 740.0164
GLU 750.0065
ALA 760.0067
LEU 770.0052
LYS 780.0069
GLN 790.0040
PRO 800.0094
VAL 810.0123
ASP 820.0189
ALA 830.0216
PRO 840.0342
SER 850.0396
PRO 860.0512
ALA 870.0286
LYS 880.0299
VAL 890.0251
LEU 900.0201
PRO 910.0169
GLU 920.0198
ASN 930.0163
TRP 940.0135
TRP 950.0102
GLN 960.0096
HIS 970.0102
PRO 980.0084
ALA 990.0171
ALA 1000.0151
LEU 1010.0123
GLY 1020.0125
THR 1030.0136
THR 1040.0144
ASP 1050.0213
SER 1060.0179
ASP 1070.0025
ILE 1080.0028
GLU 1090.0039
ILE 1100.0070
ILE 1110.0094
LYS 1120.0068
ARG 1130.0061
GLN 1140.0036
TRP 1150.0012
GLY 1160.0017
ALA 1170.0022
PHE 1180.0024
TYR 1190.0030
GLY 1200.0027
THR 1210.0043
ASP 1220.0057
LEU 1230.0047
GLU 1240.0045
LEU 1250.0051
GLN 1260.0061
LEU 1270.0055
ARG 1280.0057
ARG 1290.0066
ARG 1300.0068
GLY 1310.0052
ILE 1320.0038
ASP 1330.0021
THR 1340.0021
ILE 1350.0014
VAL 1360.0011
LEU 1370.0013
CYS 1380.0026
GLY 1390.0045
ILE 1400.0026
SER 1410.0031
THR 1420.0055
ASN 1430.0045
ILE 1440.0031
GLY 1450.0023
VAL 1460.0037
GLU 1470.0026
SER 1480.0024
THR 1490.0020
ALA 1500.0026
ARG 1510.0018
ASN 1520.0020
ALA 1530.0012
TRP 1540.0014
GLU 1550.0019
LEU 1560.0021
GLY 1570.0025
PHE 1580.0023
ASN 1590.0022
LEU 1600.0015
VAL 1610.0018
ILE 1620.0023
ALA 1630.0042
GLU 1640.0042
ASP 1650.0048
ALA 1660.0053
CYS 1670.0075
SER 1680.0071
ALA 1690.0069
ALA 1700.0085
SER 1710.0132
ALA 1720.0152
GLU 1730.0137
GLN 1740.0091
HIS 1750.0092
ASN 1760.0107
ASN 1770.0080
SER 1780.0076
ILE 1790.0094
ASN 1800.0103
HIS 1810.0093
ILE 1820.0079
TYR 1830.0076
PRO 1840.0078
ARG 1850.0080
ILE 1860.0071
ALA 1870.0038
ARG 1880.0035
VAL 1890.0037
ARG 1900.0044
SER 1910.0057
VAL 1920.0020
GLU 1930.0073
GLU 1940.0101
ILE 1950.0080
LEU 1960.0082
ASN 1970.0134
ALA 1980.0148
LEU 1990.0128
LEU 130.0132
GLU 140.0132
LEU 150.0146
ASN 160.0173
ALA 170.0168
LYS 180.0167
THR 190.0142
THR 200.0114
ALA 210.0084
LEU 220.0067
VAL 230.0066
VAL 240.0063
ILE 250.0097
ASP 260.0095
LEU 270.0107
GLN 280.0110
GLU 290.0134
GLY 300.0119
ILE 310.0094
LEU 320.0089
PRO 330.0033
PHE 340.0039
ALA 350.0073
GLY 360.0103
GLY 370.0103
PRO 380.0108
HIS 390.0096
THR 400.0074
ALA 410.0060
ASP 420.0073
GLU 430.0083
VAL 440.0070
VAL 450.0048
ASN 460.0068
ARG 470.0066
ALA 480.0044
GLY 490.0043
LYS 500.0043
LEU 510.0038
ALA 520.0040
ALA 530.0078
LYS 540.0081
PHE 550.0083
ARG 560.0090
ALA 570.0143
SER 580.0156
GLY 590.0159
GLN 600.0135
PRO 610.0096
VAL 620.0080
PHE 630.0082
LEU 640.0080
VAL 650.0125
ARG 660.0124
VAL 670.0118
GLY 680.0115
TRP 690.0189
SER 700.0262
ALA 710.0301
ASP 720.0276
TYR 730.0152
ALA 740.0137
GLU 750.0096
ALA 760.0055
LEU 770.0089
LYS 780.0103
GLN 790.0106
PRO 800.0118
VAL 810.0203
ASP 820.0261
ALA 830.0334
PRO 840.0365
SER 850.0390
PRO 860.0326
ALA 870.0190
LYS 880.0161
VAL 890.0170
LEU 900.0181
PRO 910.0195
GLU 920.0223
ASN 930.0171
TRP 940.0162
TRP 950.0160
GLN 960.0169
HIS 970.0117
PRO 980.0102
ALA 990.0084
ALA 1000.0083
LEU 1010.0050
GLY 1020.0029
THR 1030.0025
THR 1040.0038
ASP 1050.0070
SER 1060.0071
ASP 1070.0060
ILE 1080.0076
GLU 1090.0096
ILE 1100.0098
ILE 1110.0099
LYS 1120.0101
ARG 1130.0073
GLN 1140.0042
TRP 1150.0062
GLY 1160.0106
ALA 1170.0052
PHE 1180.0043
TYR 1190.0028
GLY 1200.0026
THR 1210.0068
ASP 1220.0066
LEU 1230.0076
GLU 1240.0077
LEU 1250.0075
GLN 1260.0084
LEU 1270.0084
ARG 1280.0079
ARG 1290.0076
ARG 1300.0089
GLY 1310.0083
ILE 1320.0086
ASP 1330.0084
THR 1340.0074
ILE 1350.0068
VAL 1360.0065
LEU 1370.0039
CYS 1380.0038
GLY 1390.0044
ILE 1400.0056
SER 1410.0094
THR 1420.0108
ASN 1430.0118
ILE 1440.0108
GLY 1450.0053
VAL 1460.0062
GLU 1470.0071
SER 1480.0063
THR 1490.0025
ALA 1500.0030
ARG 1510.0038
ASN 1520.0038
ALA 1530.0054
TRP 1540.0050
GLU 1550.0049
LEU 1560.0053
GLY 1570.0050
PHE 1580.0059
ASN 1590.0051
LEU 1600.0069
VAL 1610.0079
ILE 1620.0074
ALA 1630.0072
GLU 1640.0079
ASP 1650.0090
ALA 1660.0087
CYS 1670.0088
SER 1680.0085
ALA 1690.0125
ALA 1700.0123
SER 1710.0136
ALA 1720.0145
GLU 1730.0129
GLN 1740.0141
HIS 1750.0137
ASN 1760.0128
ASN 1770.0092
SER 1780.0108
ILE 1790.0103
ASN 1800.0086
HIS 1810.0074
ILE 1820.0085
TYR 1830.0093
PRO 1840.0090
ARG 1850.0118
ILE 1860.0106
ALA 1870.0100
ARG 1880.0100
VAL 1890.0090
ARG 1900.0084
SER 1910.0067
VAL 1920.0074
GLU 1930.0077
GLU 1940.0086
ILE 1950.0090
LEU 1960.0083
ASN 1970.0097
ALA 1980.0107
LEU 1990.0116
MET 120.0367
LEU 130.0208
GLU 140.0267
LEU 150.0289
ASN 160.0274
ALA 170.0263
LYS 180.0316
THR 190.0283
THR 200.0169
ALA 210.0126
LEU 220.0081
VAL 230.0069
VAL 240.0032
ILE 250.0025
ASP 260.0038
LEU 270.0053
GLN 280.0080
GLU 290.0137
GLY 300.0108
ILE 310.0156
LEU 320.0282
PRO 330.0421
PHE 340.0348
ALA 350.0289
GLY 360.0229
GLY 370.0183
PRO 380.0196
HIS 390.0240
THR 400.0311
ALA 410.0295
ASP 420.0361
GLU 430.0320
VAL 440.0148
VAL 450.0146
ASN 460.0191
ARG 470.0181
ALA 480.0079
GLY 490.0079
LYS 500.0074
LEU 510.0080
ALA 520.0081
ALA 530.0093
LYS 540.0125
PHE 550.0126
ARG 560.0136
ALA 570.0219
SER 580.0244
GLY 590.0193
GLN 600.0145
PRO 610.0093
VAL 620.0062
PHE 630.0035
LEU 640.0054
VAL 650.0057
ARG 660.0055
VAL 670.0067
GLY 680.0107
TRP 690.0123
SER 700.0150
ALA 710.0169
ASP 720.0179
TYR 730.0145
ALA 740.0149
GLU 750.0117
ALA 760.0090
LEU 770.0086
LYS 780.0088
GLN 790.0087
PRO 800.0094
VAL 810.0107
ASP 820.0115
ALA 830.0147
PRO 840.0241
SER 850.0455
PRO 860.0397
ALA 870.0205
LYS 880.0229
VAL 890.0212
LEU 900.0128
PRO 910.0214
GLU 920.0181
ASN 930.0173
TRP 940.0076
TRP 950.0087
GLN 960.0080
HIS 970.0076
PRO 980.0107
ALA 990.0149
ALA 1000.0090
LEU 1010.0068
GLY 1020.0108
THR 1030.0105
THR 1040.0423
ASP 1050.0636
SER 1060.0475
ASP 1070.0120
ILE 1080.0089
GLU 1090.0101
ILE 1100.0099
ILE 1110.0114
LYS 1120.0064
ARG 1130.0065
GLN 1140.0058
TRP 1150.0053
GLY 1160.0014
ALA 1170.0022
PHE 1180.0021
TYR 1190.0033
GLY 1200.0066
THR 1210.0046
ASP 1220.0029
LEU 1230.0019
GLU 1240.0056
LEU 1250.0041
GLN 1260.0040
LEU 1270.0055
ARG 1280.0089
ARG 1290.0084
ARG 1300.0098
GLY 1310.0126
ILE 1320.0181
ASP 1330.0193
THR 1340.0140
ILE 1350.0089
VAL 1360.0065
LEU 1370.0069
CYS 1380.0062
GLY 1390.0069
ILE 1400.0077
SER 1410.0076
THR 1420.0076
ASN 1430.0097
ILE 1440.0063
GLY 1450.0061
VAL 1460.0051
GLU 1470.0076
SER 1480.0056
THR 1490.0043
ALA 1500.0057
ARG 1510.0079
ASN 1520.0055
ALA 1530.0059
TRP 1540.0075
GLU 1550.0079
LEU 1560.0082
GLY 1570.0096
PHE 1580.0095
ASN 1590.0110
LEU 1600.0108
VAL 1610.0095
ILE 1620.0101
ALA 1630.0095
GLU 1640.0148
ASP 1650.0149
ALA 1660.0119
CYS 1670.0103
SER 1680.0133
ALA 1690.0126
ALA 1700.0176
SER 1710.0132
ALA 1720.0121
GLU 1730.0104
GLN 1740.0103
HIS 1750.0113
ASN 1760.0142
ASN 1770.0149
SER 1780.0153
ILE 1790.0172
ASN 1800.0172
HIS 1810.0184
ILE 1820.0170
TYR 1830.0156
PRO 1840.0163
ARG 1850.0177
ILE 1860.0151
ALA 1870.0140
ARG 1880.0151
VAL 1890.0177
ARG 1900.0168
SER 1910.0191
VAL 1920.0115
GLU 1930.0242
GLU 1940.0217
ILE 1950.0143
LEU 1960.0211
ASN 1970.0275
ALA 1980.0233
LEU 1990.0273

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.