CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  Ecoli yecd  ***

<R2> analysis for 251228182821571726

---  normal mode 48  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0646
MET 120.0352
LEU 130.0194
GLU 140.0131
LEU 150.0122
ASN 160.0159
ALA 170.0129
LYS 180.0162
THR 190.0158
THR 200.0080
ALA 210.0062
LEU 220.0044
VAL 230.0060
VAL 240.0012
ILE 250.0010
ASP 260.0017
LEU 270.0022
GLN 280.0039
GLU 290.0042
GLY 300.0064
ILE 310.0075
LEU 320.0079
PRO 330.0135
PHE 340.0121
ALA 350.0055
GLY 360.0084
GLY 370.0067
PRO 380.0071
HIS 390.0057
THR 400.0054
ALA 410.0067
ASP 420.0092
GLU 430.0077
VAL 440.0043
VAL 450.0057
ASN 460.0077
ARG 470.0066
ALA 480.0055
GLY 490.0063
LYS 500.0068
LEU 510.0057
ALA 520.0024
ALA 530.0038
LYS 540.0048
PHE 550.0049
ARG 560.0056
ALA 570.0108
SER 580.0106
GLY 590.0068
GLN 600.0045
PRO 610.0020
VAL 620.0019
PHE 630.0060
LEU 640.0077
VAL 650.0079
ARG 660.0076
VAL 670.0081
GLY 680.0100
TRP 690.0092
SER 700.0086
ALA 710.0082
ASP 720.0094
TYR 730.0093
ALA 740.0097
GLU 750.0099
ALA 760.0077
LEU 770.0038
LYS 780.0069
GLN 790.0101
PRO 800.0145
VAL 810.0092
ASP 820.0086
ALA 830.0150
PRO 840.0275
SER 850.0264
PRO 860.0303
ALA 870.0293
LYS 880.0268
VAL 890.0179
LEU 900.0089
PRO 910.0098
GLU 920.0059
ASN 930.0039
TRP 940.0050
TRP 950.0051
GLN 960.0049
HIS 970.0057
PRO 980.0040
ALA 990.0049
ALA 1000.0069
LEU 1010.0052
GLY 1020.0051
THR 1030.0100
THR 1040.0354
ASP 1050.0592
SER 1060.0445
ASP 1070.0129
ILE 1080.0110
GLU 1090.0117
ILE 1100.0111
ILE 1110.0117
LYS 1120.0030
ARG 1130.0036
GLN 1140.0029
TRP 1150.0034
GLY 1160.0047
ALA 1170.0057
PHE 1180.0050
TYR 1190.0033
GLY 1200.0060
THR 1210.0071
ASP 1220.0076
LEU 1230.0085
GLU 1240.0112
LEU 1250.0087
GLN 1260.0088
LEU 1270.0093
ARG 1280.0099
ARG 1290.0065
ARG 1300.0064
GLY 1310.0072
ILE 1320.0126
ASP 1330.0141
THR 1340.0103
ILE 1350.0087
VAL 1360.0053
LEU 1370.0062
CYS 1380.0058
GLY 1390.0061
ILE 1400.0057
SER 1410.0065
THR 1420.0078
ASN 1430.0092
ILE 1440.0065
GLY 1450.0065
VAL 1460.0061
GLU 1470.0058
SER 1480.0064
THR 1490.0072
ALA 1500.0076
ARG 1510.0067
ASN 1520.0087
ALA 1530.0106
TRP 1540.0106
GLU 1550.0090
LEU 1560.0110
GLY 1570.0115
PHE 1580.0121
ASN 1590.0127
LEU 1600.0098
VAL 1610.0085
ILE 1620.0095
ALA 1630.0087
GLU 1640.0088
ASP 1650.0073
ALA 1660.0057
CYS 1670.0076
SER 1680.0079
ALA 1690.0108
ALA 1700.0129
SER 1710.0124
ALA 1720.0132
GLU 1730.0143
GLN 1740.0139
HIS 1750.0119
ASN 1760.0123
ASN 1770.0109
SER 1780.0102
ILE 1790.0107
ASN 1800.0111
HIS 1810.0082
ILE 1820.0068
TYR 1830.0083
PRO 1840.0135
ARG 1850.0073
ILE 1860.0077
ALA 1870.0125
ARG 1880.0133
VAL 1890.0133
ARG 1900.0078
SER 1910.0059
VAL 1920.0060
GLU 1930.0151
GLU 1940.0145
ILE 1950.0079
LEU 1960.0131
ASN 1970.0183
ALA 1980.0121
LEU 1990.0157
LEU 150.0220
ASN 160.0230
ALA 170.0149
LYS 180.0240
THR 190.0171
THR 200.0129
ALA 210.0093
LEU 220.0058
VAL 230.0050
VAL 240.0051
ILE 250.0073
ASP 260.0089
LEU 270.0091
GLN 280.0045
GLU 290.0079
GLY 300.0076
ILE 310.0138
LEU 320.0140
PRO 330.0162
PHE 340.0185
ALA 350.0164
GLY 360.0161
GLY 370.0137
PRO 380.0132
HIS 390.0108
THR 400.0139
ALA 410.0152
ASP 420.0145
GLU 430.0078
VAL 440.0085
VAL 450.0107
ASN 460.0068
ARG 470.0053
ALA 480.0071
GLY 490.0079
LYS 500.0080
LEU 510.0102
ALA 520.0113
ALA 530.0140
LYS 540.0141
PHE 550.0122
ARG 560.0166
ALA 570.0206
SER 580.0206
GLY 590.0198
GLN 600.0144
PRO 610.0115
VAL 620.0064
PHE 630.0028
LEU 640.0040
VAL 650.0052
ARG 660.0071
VAL 670.0124
GLY 680.0133
TRP 690.0196
SER 700.0271
ALA 710.0419
ASP 720.0417
TYR 730.0256
ALA 740.0377
GLU 750.0198
ALA 760.0174
LEU 770.0169
LYS 780.0223
GLN 790.0107
PRO 800.0092
VAL 810.0128
ASP 820.0194
ALA 830.0335
PRO 840.0435
SER 850.0449
PRO 860.0529
ALA 870.0584
LYS 880.0646
VAL 890.0546
LEU 900.0389
PRO 910.0334
GLU 920.0488
ASN 930.0366
TRP 940.0169
TRP 950.0091
GLN 960.0084
HIS 970.0058
PRO 980.0052
ALA 990.0042
ALA 1000.0059
LEU 1010.0037
GLY 1020.0035
THR 1030.0043
THR 1040.0150
ASP 1050.0228
SER 1060.0203
ASP 1070.0052
ILE 1080.0029
GLU 1090.0032
ILE 1100.0057
ILE 1110.0112
LYS 1120.0078
ARG 1130.0087
GLN 1140.0056
TRP 1150.0031
GLY 1160.0032
ALA 1170.0032
PHE 1180.0045
TYR 1190.0068
GLY 1200.0075
THR 1210.0067
ASP 1220.0064
LEU 1230.0046
GLU 1240.0036
LEU 1250.0032
GLN 1260.0037
LEU 1270.0020
ARG 1280.0038
ARG 1290.0044
ARG 1300.0068
GLY 1310.0133
ILE 1320.0102
ASP 1330.0135
THR 1340.0123
ILE 1350.0101
VAL 1360.0082
LEU 1370.0086
CYS 1380.0078
GLY 1390.0100
ILE 1400.0112
SER 1410.0102
THR 1420.0070
ASN 1430.0048
ILE 1440.0059
GLY 1450.0075
VAL 1460.0068
GLU 1470.0045
SER 1480.0058
THR 1490.0060
ALA 1500.0053
ARG 1510.0058
ASN 1520.0065
ALA 1530.0070
TRP 1540.0067
GLU 1550.0069
LEU 1560.0070
GLY 1570.0072
PHE 1580.0081
ASN 1590.0108
LEU 1600.0100
VAL 1610.0090
ILE 1620.0085
ALA 1630.0076
GLU 1640.0059
ASP 1650.0061
ALA 1660.0088
CYS 1670.0091
SER 1680.0111
ALA 1690.0119
ALA 1700.0148
SER 1710.0170
ALA 1720.0162
GLU 1730.0153
GLN 1740.0083
HIS 1750.0081
ASN 1760.0093
ASN 1770.0094
SER 1780.0043
ILE 1790.0050
ASN 1800.0096
HIS 1810.0100
ILE 1820.0060
TYR 1830.0041
PRO 1840.0063
ARG 1850.0079
ILE 1860.0057
ALA 1870.0044
ARG 1880.0051
VAL 1890.0050
ARG 1900.0066
SER 1910.0088
VAL 1920.0103
GLU 1930.0116
GLU 1940.0108
ILE 1950.0118
LEU 1960.0142
ASN 1970.0146
ALA 1980.0118
LEU 1990.0120
LEU 130.0166
GLU 140.0156
LEU 150.0121
ASN 160.0111
ALA 170.0137
LYS 180.0141
THR 190.0080
THR 200.0056
ALA 210.0043
LEU 220.0037
VAL 230.0031
VAL 240.0030
ILE 250.0026
ASP 260.0031
LEU 270.0020
GLN 280.0027
GLU 290.0043
GLY 300.0092
ILE 310.0107
LEU 320.0098
PRO 330.0229
PHE 340.0233
ALA 350.0207
GLY 360.0263
GLY 370.0219
PRO 380.0204
HIS 390.0177
THR 400.0207
ALA 410.0158
ASP 420.0145
GLU 430.0127
VAL 440.0080
VAL 450.0052
ASN 460.0066
ARG 470.0054
ALA 480.0024
GLY 490.0031
LYS 500.0028
LEU 510.0032
ALA 520.0036
ALA 530.0064
LYS 540.0088
PHE 550.0046
ARG 560.0032
ALA 570.0125
SER 580.0137
GLY 590.0125
GLN 600.0072
PRO 610.0034
VAL 620.0033
PHE 630.0040
LEU 640.0052
VAL 650.0042
ARG 660.0056
VAL 670.0069
GLY 680.0085
TRP 690.0127
SER 700.0146
ALA 710.0153
ASP 720.0146
TYR 730.0118
ALA 740.0116
GLU 750.0118
ALA 760.0105
LEU 770.0045
LYS 780.0036
GLN 790.0024
PRO 800.0050
VAL 810.0037
ASP 820.0084
ALA 830.0080
PRO 840.0114
SER 850.0567
PRO 860.0443
ALA 870.0216
LYS 880.0265
VAL 890.0171
LEU 900.0146
PRO 910.0136
GLU 920.0108
ASN 930.0104
TRP 940.0107
TRP 950.0083
GLN 960.0067
HIS 970.0063
PRO 980.0062
ALA 990.0093
ALA 1000.0096
LEU 1010.0077
GLY 1020.0106
THR 1030.0099
THR 1040.0123
ASP 1050.0126
SER 1060.0108
ASP 1070.0084
ILE 1080.0073
GLU 1090.0065
ILE 1100.0055
ILE 1110.0061
LYS 1120.0055
ARG 1130.0069
GLN 1140.0043
TRP 1150.0024
GLY 1160.0035
ALA 1170.0053
PHE 1180.0046
TYR 1190.0050
GLY 1200.0066
THR 1210.0054
ASP 1220.0057
LEU 1230.0054
GLU 1240.0048
LEU 1250.0052
GLN 1260.0058
LEU 1270.0053
ARG 1280.0042
ARG 1290.0030
ARG 1300.0045
GLY 1310.0038
ILE 1320.0055
ASP 1330.0081
THR 1340.0070
ILE 1350.0069
VAL 1360.0064
LEU 1370.0039
CYS 1380.0021
GLY 1390.0051
ILE 1400.0083
SER 1410.0083
THR 1420.0064
ASN 1430.0067
ILE 1440.0085
GLY 1450.0049
VAL 1460.0045
GLU 1470.0046
SER 1480.0052
THR 1490.0054
ALA 1500.0055
ARG 1510.0060
ASN 1520.0060
ALA 1530.0083
TRP 1540.0074
GLU 1550.0064
LEU 1560.0075
GLY 1570.0089
PHE 1580.0096
ASN 1590.0101
LEU 1600.0104
VAL 1610.0084
ILE 1620.0058
ALA 1630.0031
GLU 1640.0013
ASP 1650.0057
ALA 1660.0051
CYS 1670.0070
SER 1680.0100
ALA 1690.0161
ALA 1700.0239
SER 1710.0233
ALA 1720.0202
GLU 1730.0124
GLN 1740.0102
HIS 1750.0082
ASN 1760.0074
ASN 1770.0012
SER 1780.0032
ILE 1790.0035
ASN 1800.0079
HIS 1810.0081
ILE 1820.0091
TYR 1830.0089
PRO 1840.0123
ARG 1850.0130
ILE 1860.0120
ALA 1870.0105
ARG 1880.0098
VAL 1890.0095
ARG 1900.0088
SER 1910.0087
VAL 1920.0060
GLU 1930.0140
GLU 1940.0139
ILE 1950.0106
LEU 1960.0124
ASN 1970.0178
ALA 1980.0151
LEU 1990.0149
MET 120.0219
LEU 130.0158
GLU 140.0150
LEU 150.0110
ASN 160.0090
ALA 170.0079
LYS 180.0087
THR 190.0089
THR 200.0068
ALA 210.0050
LEU 220.0036
VAL 230.0029
VAL 240.0037
ILE 250.0044
ASP 260.0048
LEU 270.0044
GLN 280.0058
GLU 290.0010
GLY 300.0024
ILE 310.0072
LEU 320.0093
PRO 330.0143
PHE 340.0159
ALA 350.0128
GLY 360.0120
GLY 370.0089
PRO 380.0067
HIS 390.0080
THR 400.0111
ALA 410.0135
ASP 420.0134
GLU 430.0102
VAL 440.0088
VAL 450.0100
ASN 460.0084
ARG 470.0068
ALA 480.0062
GLY 490.0073
LYS 500.0053
LEU 510.0056
ALA 520.0038
ALA 530.0066
LYS 540.0054
PHE 550.0052
ARG 560.0069
ALA 570.0092
SER 580.0088
GLY 590.0110
GLN 600.0074
PRO 610.0060
VAL 620.0046
PHE 630.0067
LEU 640.0082
VAL 650.0097
ARG 660.0104
VAL 670.0120
GLY 680.0193
TRP 690.0188
SER 700.0247
ALA 710.0258
ASP 720.0247
TYR 730.0159
ALA 740.0181
GLU 750.0131
ALA 760.0080
LEU 770.0045
LYS 780.0113
GLN 790.0154
PRO 800.0163
VAL 810.0151
ASP 820.0164
ALA 830.0246
PRO 840.0405
SER 850.0435
PRO 860.0196
ALA 870.0218
LYS 880.0150
VAL 890.0214
LEU 900.0161
PRO 910.0132
GLU 920.0173
ASN 930.0101
TRP 940.0086
TRP 950.0103
GLN 960.0063
HIS 970.0047
PRO 980.0024
ALA 990.0027
ALA 1000.0066
LEU 1010.0061
GLY 1020.0062
THR 1030.0056
THR 1040.0101
ASP 1050.0129
SER 1060.0099
ASP 1070.0027
ILE 1080.0078
GLU 1090.0087
ILE 1100.0113
ILE 1110.0134
LYS 1120.0129
ARG 1130.0096
GLN 1140.0047
TRP 1150.0053
GLY 1160.0050
ALA 1170.0053
PHE 1180.0047
TYR 1190.0036
GLY 1200.0092
THR 1210.0096
ASP 1220.0100
LEU 1230.0100
GLU 1240.0089
LEU 1250.0109
GLN 1260.0129
LEU 1270.0112
ARG 1280.0122
ARG 1290.0148
ARG 1300.0164
GLY 1310.0154
ILE 1320.0057
ASP 1330.0044
THR 1340.0041
ILE 1350.0063
VAL 1360.0056
LEU 1370.0039
CYS 1380.0019
GLY 1390.0034
ILE 1400.0077
SER 1410.0078
THR 1420.0071
ASN 1430.0080
ILE 1440.0058
GLY 1450.0062
VAL 1460.0056
GLU 1470.0055
SER 1480.0028
THR 1490.0020
ALA 1500.0020
ARG 1510.0032
ASN 1520.0024
ALA 1530.0032
TRP 1540.0024
GLU 1550.0028
LEU 1560.0033
GLY 1570.0026
PHE 1580.0034
ASN 1590.0035
LEU 1600.0077
VAL 1610.0077
ILE 1620.0071
ALA 1630.0075
GLU 1640.0062
ASP 1650.0054
ALA 1660.0073
CYS 1670.0078
SER 1680.0090
ALA 1690.0098
ALA 1700.0108
SER 1710.0081
ALA 1720.0056
GLU 1730.0038
GLN 1740.0058
HIS 1750.0065
ASN 1760.0035
ASN 1770.0033
SER 1780.0055
ILE 1790.0063
ASN 1800.0064
HIS 1810.0053
ILE 1820.0048
TYR 1830.0069
PRO 1840.0047
ARG 1850.0039
ILE 1860.0034
ALA 1870.0065
ARG 1880.0105
VAL 1890.0095
ARG 1900.0086
SER 1910.0077
VAL 1920.0059
GLU 1930.0061
GLU 1940.0076
ILE 1950.0068
LEU 1960.0048
ASN 1970.0071
ALA 1980.0068
LEU 1990.0045

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.