CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  Ecoli yecd  ***

<R2> analysis for 251228182821571726

---  normal mode 63  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0505
MET 120.0241
LEU 130.0163
GLU 140.0164
LEU 150.0094
ASN 160.0069
ALA 170.0034
LYS 180.0020
THR 190.0020
THR 200.0032
ALA 210.0044
LEU 220.0050
VAL 230.0063
VAL 240.0083
ILE 250.0091
ASP 260.0083
LEU 270.0076
GLN 280.0119
GLU 290.0123
GLY 300.0125
ILE 310.0141
LEU 320.0149
PRO 330.0134
PHE 340.0121
ALA 350.0115
GLY 360.0101
GLY 370.0088
PRO 380.0116
HIS 390.0158
THR 400.0190
ALA 410.0174
ASP 420.0204
GLU 430.0200
VAL 440.0126
VAL 450.0125
ASN 460.0139
ARG 470.0131
ALA 480.0061
GLY 490.0054
LYS 500.0061
LEU 510.0054
ALA 520.0028
ALA 530.0026
LYS 540.0040
PHE 550.0041
ARG 560.0029
ALA 570.0047
SER 580.0062
GLY 590.0050
GLN 600.0059
PRO 610.0070
VAL 620.0078
PHE 630.0089
LEU 640.0079
VAL 650.0105
ARG 660.0107
VAL 670.0131
GLY 680.0160
TRP 690.0153
SER 700.0190
ALA 710.0203
ASP 720.0229
TYR 730.0151
ALA 740.0180
GLU 750.0134
ALA 760.0110
LEU 770.0071
LYS 780.0071
GLN 790.0095
PRO 800.0165
VAL 810.0150
ASP 820.0181
ALA 830.0181
PRO 840.0323
SER 850.0256
PRO 860.0290
ALA 870.0131
LYS 880.0178
VAL 890.0176
LEU 900.0175
PRO 910.0187
GLU 920.0133
ASN 930.0141
TRP 940.0144
TRP 950.0119
GLN 960.0097
HIS 970.0091
PRO 980.0116
ALA 990.0113
ALA 1000.0133
LEU 1010.0093
GLY 1020.0102
THR 1030.0088
THR 1040.0177
ASP 1050.0248
SER 1060.0191
ASP 1070.0120
ILE 1080.0101
GLU 1090.0099
ILE 1100.0114
ILE 1110.0119
LYS 1120.0113
ARG 1130.0097
GLN 1140.0079
TRP 1150.0081
GLY 1160.0082
ALA 1170.0091
PHE 1180.0071
TYR 1190.0064
GLY 1200.0059
THR 1210.0065
ASP 1220.0064
LEU 1230.0058
GLU 1240.0036
LEU 1250.0044
GLN 1260.0049
LEU 1270.0039
ARG 1280.0033
ARG 1290.0042
ARG 1300.0038
GLY 1310.0031
ILE 1320.0026
ASP 1330.0037
THR 1340.0044
ILE 1350.0053
VAL 1360.0026
LEU 1370.0024
CYS 1380.0015
GLY 1390.0014
ILE 1400.0069
SER 1410.0038
THR 1420.0016
ASN 1430.0050
ILE 1440.0071
GLY 1450.0058
VAL 1460.0041
GLU 1470.0054
SER 1480.0087
THR 1490.0081
ALA 1500.0081
ARG 1510.0087
ASN 1520.0119
ALA 1530.0117
TRP 1540.0121
GLU 1550.0113
LEU 1560.0099
GLY 1570.0101
PHE 1580.0100
ASN 1590.0108
LEU 1600.0065
VAL 1610.0039
ILE 1620.0026
ALA 1630.0028
GLU 1640.0095
ASP 1650.0110
ALA 1660.0095
CYS 1670.0070
SER 1680.0078
ALA 1690.0030
ALA 1700.0066
SER 1710.0038
ALA 1720.0057
GLU 1730.0097
GLN 1740.0092
HIS 1750.0071
ASN 1760.0095
ASN 1770.0110
SER 1780.0097
ILE 1790.0098
ASN 1800.0103
HIS 1810.0105
ILE 1820.0087
TYR 1830.0074
PRO 1840.0074
ARG 1850.0076
ILE 1860.0094
ALA 1870.0102
ARG 1880.0034
VAL 1890.0017
ARG 1900.0023
SER 1910.0046
VAL 1920.0042
GLU 1930.0071
GLU 1940.0067
ILE 1950.0048
LEU 1960.0087
ASN 1970.0136
ALA 1980.0120
LEU 1990.0084
LEU 150.0147
ASN 160.0115
ALA 170.0078
LYS 180.0101
THR 190.0106
THR 200.0095
ALA 210.0091
LEU 220.0077
VAL 230.0056
VAL 240.0041
ILE 250.0031
ASP 260.0031
LEU 270.0067
GLN 280.0066
GLU 290.0082
GLY 300.0078
ILE 310.0056
LEU 320.0042
PRO 330.0052
PHE 340.0061
ALA 350.0066
GLY 360.0060
GLY 370.0043
PRO 380.0045
HIS 390.0068
THR 400.0078
ALA 410.0069
ASP 420.0088
GLU 430.0094
VAL 440.0069
VAL 450.0065
ASN 460.0067
ARG 470.0071
ALA 480.0066
GLY 490.0048
LYS 500.0037
LEU 510.0078
ALA 520.0043
ALA 530.0015
LYS 540.0064
PHE 550.0045
ARG 560.0029
ALA 570.0059
SER 580.0065
GLY 590.0067
GLN 600.0077
PRO 610.0105
VAL 620.0108
PHE 630.0081
LEU 640.0059
VAL 650.0039
ARG 660.0033
VAL 670.0103
GLY 680.0115
TRP 690.0132
SER 700.0140
ALA 710.0123
ASP 720.0183
TYR 730.0173
ALA 740.0211
GLU 750.0133
ALA 760.0158
LEU 770.0167
LYS 780.0190
GLN 790.0147
PRO 800.0127
VAL 810.0106
ASP 820.0086
ALA 830.0134
PRO 840.0127
SER 850.0174
PRO 860.0275
ALA 870.0171
LYS 880.0178
VAL 890.0197
LEU 900.0131
PRO 910.0135
GLU 920.0160
ASN 930.0150
TRP 940.0115
TRP 950.0058
GLN 960.0067
HIS 970.0071
PRO 980.0093
ALA 990.0122
ALA 1000.0128
LEU 1010.0110
GLY 1020.0118
THR 1030.0143
THR 1040.0152
ASP 1050.0146
SER 1060.0155
ASP 1070.0128
ILE 1080.0100
GLU 1090.0061
ILE 1100.0036
ILE 1110.0041
LYS 1120.0068
ARG 1130.0096
GLN 1140.0120
TRP 1150.0078
GLY 1160.0066
ALA 1170.0053
PHE 1180.0046
TYR 1190.0066
GLY 1200.0020
THR 1210.0024
ASP 1220.0073
LEU 1230.0059
GLU 1240.0065
LEU 1250.0085
GLN 1260.0102
LEU 1270.0094
ARG 1280.0097
ARG 1290.0115
ARG 1300.0126
GLY 1310.0121
ILE 1320.0099
ASP 1330.0100
THR 1340.0079
ILE 1350.0037
VAL 1360.0034
LEU 1370.0034
CYS 1380.0032
GLY 1390.0033
ILE 1400.0043
SER 1410.0051
THR 1420.0048
ASN 1430.0079
ILE 1440.0077
GLY 1450.0062
VAL 1460.0048
GLU 1470.0057
SER 1480.0052
THR 1490.0047
ALA 1500.0050
ARG 1510.0045
ASN 1520.0039
ALA 1530.0036
TRP 1540.0041
GLU 1550.0051
LEU 1560.0042
GLY 1570.0054
PHE 1580.0042
ASN 1590.0021
LEU 1600.0019
VAL 1610.0045
ILE 1620.0067
ALA 1630.0089
GLU 1640.0088
ASP 1650.0088
ALA 1660.0088
CYS 1670.0024
SER 1680.0029
ALA 1690.0081
ALA 1700.0121
SER 1710.0160
ALA 1720.0148
GLU 1730.0171
GLN 1740.0144
HIS 1750.0090
ASN 1760.0105
ASN 1770.0117
SER 1780.0069
ILE 1790.0063
ASN 1800.0079
HIS 1810.0071
ILE 1820.0054
TYR 1830.0065
PRO 1840.0098
ARG 1850.0089
ILE 1860.0060
ALA 1870.0086
ARG 1880.0113
VAL 1890.0135
ARG 1900.0152
SER 1910.0203
VAL 1920.0144
GLU 1930.0149
GLU 1940.0215
ILE 1950.0222
LEU 1960.0184
ASN 1970.0256
ALA 1980.0284
LEU 1990.0195
LEU 130.0370
GLU 140.0408
LEU 150.0179
ASN 160.0121
ALA 170.0059
LYS 180.0113
THR 190.0121
THR 200.0106
ALA 210.0134
LEU 220.0102
VAL 230.0098
VAL 240.0074
ILE 250.0129
ASP 260.0152
LEU 270.0142
GLN 280.0178
GLU 290.0250
GLY 300.0256
ILE 310.0251
LEU 320.0249
PRO 330.0159
PHE 340.0164
ALA 350.0113
GLY 360.0168
GLY 370.0180
PRO 380.0200
HIS 390.0188
THR 400.0175
ALA 410.0119
ASP 420.0194
GLU 430.0198
VAL 440.0127
VAL 450.0076
ASN 460.0121
ARG 470.0114
ALA 480.0071
GLY 490.0084
LYS 500.0062
LEU 510.0072
ALA 520.0096
ALA 530.0091
LYS 540.0100
PHE 550.0117
ARG 560.0170
ALA 570.0264
SER 580.0242
GLY 590.0297
GLN 600.0222
PRO 610.0157
VAL 620.0117
PHE 630.0120
LEU 640.0106
VAL 650.0153
ARG 660.0176
VAL 670.0205
GLY 680.0221
TRP 690.0190
SER 700.0205
ALA 710.0213
ASP 720.0154
TYR 730.0093
ALA 740.0069
GLU 750.0084
ALA 760.0078
LEU 770.0058
LYS 780.0081
GLN 790.0106
PRO 800.0142
VAL 810.0145
ASP 820.0217
ALA 830.0244
PRO 840.0242
SER 850.0209
PRO 860.0254
ALA 870.0171
LYS 880.0206
VAL 890.0155
LEU 900.0158
PRO 910.0245
GLU 920.0391
ASN 930.0304
TRP 940.0286
TRP 950.0251
GLN 960.0265
HIS 970.0198
PRO 980.0159
ALA 990.0170
ALA 1000.0106
LEU 1010.0053
GLY 1020.0112
THR 1030.0087
THR 1040.0128
ASP 1050.0309
SER 1060.0245
ASP 1070.0069
ILE 1080.0078
GLU 1090.0116
ILE 1100.0128
ILE 1110.0142
LYS 1120.0159
ARG 1130.0106
GLN 1140.0088
TRP 1150.0098
GLY 1160.0133
ALA 1170.0097
PHE 1180.0090
TYR 1190.0082
GLY 1200.0075
THR 1210.0089
ASP 1220.0081
LEU 1230.0094
GLU 1240.0088
LEU 1250.0074
GLN 1260.0089
LEU 1270.0094
ARG 1280.0079
ARG 1290.0082
ARG 1300.0095
GLY 1310.0091
ILE 1320.0101
ASP 1330.0073
THR 1340.0083
ILE 1350.0102
VAL 1360.0116
LEU 1370.0103
CYS 1380.0066
GLY 1390.0037
ILE 1400.0043
SER 1410.0079
THR 1420.0086
ASN 1430.0092
ILE 1440.0076
GLY 1450.0059
VAL 1460.0059
GLU 1470.0069
SER 1480.0071
THR 1490.0077
ALA 1500.0082
ARG 1510.0090
ASN 1520.0105
ALA 1530.0122
TRP 1540.0108
GLU 1550.0111
LEU 1560.0130
GLY 1570.0105
PHE 1580.0128
ASN 1590.0134
LEU 1600.0167
VAL 1610.0201
ILE 1620.0190
ALA 1630.0190
GLU 1640.0187
ASP 1650.0159
ALA 1660.0151
CYS 1670.0129
SER 1680.0120
ALA 1690.0121
ALA 1700.0153
SER 1710.0178
ALA 1720.0192
GLU 1730.0167
GLN 1740.0154
HIS 1750.0157
ASN 1760.0171
ASN 1770.0150
SER 1780.0136
ILE 1790.0174
ASN 1800.0184
HIS 1810.0127
ILE 1820.0117
TYR 1830.0139
PRO 1840.0152
ARG 1850.0097
ILE 1860.0145
ALA 1870.0203
ARG 1880.0246
VAL 1890.0270
ARG 1900.0214
SER 1910.0169
VAL 1920.0127
GLU 1930.0099
GLU 1940.0180
ILE 1950.0118
LEU 1960.0054
ASN 1970.0265
ALA 1980.0201
LEU 1990.0084
MET 120.0083
LEU 130.0065
GLU 140.0084
LEU 150.0044
ASN 160.0014
ALA 170.0012
LYS 180.0010
THR 190.0016
THR 200.0015
ALA 210.0013
LEU 220.0010
VAL 230.0010
VAL 240.0060
ILE 250.0083
ASP 260.0089
LEU 270.0087
GLN 280.0201
GLU 290.0232
GLY 300.0204
ILE 310.0232
LEU 320.0171
PRO 330.0200
PHE 340.0191
ALA 350.0119
GLY 360.0084
GLY 370.0096
PRO 380.0117
HIS 390.0096
THR 400.0040
ALA 410.0047
ASP 420.0111
GLU 430.0111
VAL 440.0035
VAL 450.0024
ASN 460.0073
ARG 470.0087
ALA 480.0038
GLY 490.0037
LYS 500.0051
LEU 510.0052
ALA 520.0043
ALA 530.0031
LYS 540.0034
PHE 550.0022
ARG 560.0044
ALA 570.0028
SER 580.0032
GLY 590.0039
GLN 600.0039
PRO 610.0031
VAL 620.0026
PHE 630.0016
LEU 640.0051
VAL 650.0070
ARG 660.0088
VAL 670.0119
GLY 680.0115
TRP 690.0090
SER 700.0079
ALA 710.0037
ASP 720.0082
TYR 730.0068
ALA 740.0127
GLU 750.0130
ALA 760.0112
LEU 770.0110
LYS 780.0118
GLN 790.0170
PRO 800.0254
VAL 810.0230
ASP 820.0246
ALA 830.0190
PRO 840.0270
SER 850.0301
PRO 860.0505
ALA 870.0309
LYS 880.0192
VAL 890.0198
LEU 900.0142
PRO 910.0243
GLU 920.0302
ASN 930.0318
TRP 940.0209
TRP 950.0184
GLN 960.0159
HIS 970.0126
PRO 980.0132
ALA 990.0132
ALA 1000.0105
LEU 1010.0081
GLY 1020.0100
THR 1030.0081
THR 1040.0265
ASP 1050.0315
SER 1060.0222
ASP 1070.0102
ILE 1080.0046
GLU 1090.0016
ILE 1100.0027
ILE 1110.0059
LYS 1120.0118
ARG 1130.0099
GLN 1140.0088
TRP 1150.0087
GLY 1160.0076
ALA 1170.0092
PHE 1180.0102
TYR 1190.0102
GLY 1200.0079
THR 1210.0055
ASP 1220.0025
LEU 1230.0033
GLU 1240.0016
LEU 1250.0043
GLN 1260.0048
LEU 1270.0041
ARG 1280.0061
ARG 1290.0087
ARG 1300.0088
GLY 1310.0079
ILE 1320.0027
ASP 1330.0028
THR 1340.0034
ILE 1350.0031
VAL 1360.0022
LEU 1370.0020
CYS 1380.0018
GLY 1390.0017
ILE 1400.0039
SER 1410.0029
THR 1420.0025
ASN 1430.0015
ILE 1440.0048
GLY 1450.0052
VAL 1460.0061
GLU 1470.0064
SER 1480.0074
THR 1490.0081
ALA 1500.0075
ARG 1510.0072
ASN 1520.0090
ALA 1530.0080
TRP 1540.0065
GLU 1550.0066
LEU 1560.0044
GLY 1570.0043
PHE 1580.0049
ASN 1590.0067
LEU 1600.0050
VAL 1610.0040
ILE 1620.0066
ALA 1630.0084
GLU 1640.0108
ASP 1650.0114
ALA 1660.0087
CYS 1670.0067
SER 1680.0061
ALA 1690.0067
ALA 1700.0081
SER 1710.0113
ALA 1720.0118
GLU 1730.0113
GLN 1740.0110
HIS 1750.0103
ASN 1760.0107
ASN 1770.0108
SER 1780.0109
ILE 1790.0102
ASN 1800.0109
HIS 1810.0101
ILE 1820.0094
TYR 1830.0096
PRO 1840.0129
ARG 1850.0096
ILE 1860.0068
ALA 1870.0092
ARG 1880.0105
VAL 1890.0131
ARG 1900.0116
SER 1910.0148
VAL 1920.0128
GLU 1930.0152
GLU 1940.0124
ILE 1950.0090
LEU 1960.0109
ASN 1970.0104
ALA 1980.0062
LEU 1990.0069

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.