CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  Ecoli yecd  ***

<R2> analysis for 251228182821571726

---  normal mode 96  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0450
MET 120.0410
LEU 130.0232
GLU 140.0187
LEU 150.0143
ASN 160.0143
ALA 170.0096
LYS 180.0095
THR 190.0161
THR 200.0105
ALA 210.0091
LEU 220.0100
VAL 230.0100
VAL 240.0038
ILE 250.0049
ASP 260.0064
LEU 270.0070
GLN 280.0146
GLU 290.0118
GLY 300.0101
ILE 310.0096
LEU 320.0075
PRO 330.0135
PHE 340.0080
ALA 350.0050
GLY 360.0064
GLY 370.0099
PRO 380.0151
HIS 390.0157
THR 400.0176
ALA 410.0180
ASP 420.0196
GLU 430.0199
VAL 440.0148
VAL 450.0147
ASN 460.0123
ARG 470.0133
ALA 480.0147
GLY 490.0092
LYS 500.0127
LEU 510.0138
ALA 520.0090
ALA 530.0187
LYS 540.0229
PHE 550.0129
ARG 560.0256
ALA 570.0447
SER 580.0429
GLY 590.0450
GLN 600.0144
PRO 610.0137
VAL 620.0114
PHE 630.0131
LEU 640.0120
VAL 650.0103
ARG 660.0122
VAL 670.0121
GLY 680.0118
TRP 690.0122
SER 700.0201
ALA 710.0309
ASP 720.0409
TYR 730.0285
ALA 740.0265
GLU 750.0111
ALA 760.0127
LEU 770.0110
LYS 780.0122
GLN 790.0108
PRO 800.0141
VAL 810.0112
ASP 820.0133
ALA 830.0174
PRO 840.0271
SER 850.0434
PRO 860.0097
ALA 870.0406
LYS 880.0290
VAL 890.0320
LEU 900.0076
PRO 910.0112
GLU 920.0108
ASN 930.0120
TRP 940.0122
TRP 950.0139
GLN 960.0144
HIS 970.0160
PRO 980.0189
ALA 990.0175
ALA 1000.0174
LEU 1010.0135
GLY 1020.0110
THR 1030.0088
THR 1040.0203
ASP 1050.0397
SER 1060.0170
ASP 1070.0190
ILE 1080.0148
GLU 1090.0153
ILE 1100.0102
ILE 1110.0112
LYS 1120.0085
ARG 1130.0079
GLN 1140.0066
TRP 1150.0059
GLY 1160.0035
ALA 1170.0042
PHE 1180.0032
TYR 1190.0053
GLY 1200.0062
THR 1210.0041
ASP 1220.0027
LEU 1230.0037
GLU 1240.0033
LEU 1250.0039
GLN 1260.0064
LEU 1270.0083
ARG 1280.0065
ARG 1290.0073
ARG 1300.0099
GLY 1310.0112
ILE 1320.0124
ASP 1330.0142
THR 1340.0148
ILE 1350.0145
VAL 1360.0135
LEU 1370.0105
CYS 1380.0090
GLY 1390.0070
ILE 1400.0019
SER 1410.0031
THR 1420.0033
ASN 1430.0061
ILE 1440.0055
GLY 1450.0044
VAL 1460.0028
GLU 1470.0035
SER 1480.0026
THR 1490.0022
ALA 1500.0022
ARG 1510.0020
ASN 1520.0013
ALA 1530.0020
TRP 1540.0023
GLU 1550.0020
LEU 1560.0021
GLY 1570.0058
PHE 1580.0082
ASN 1590.0122
LEU 1600.0124
VAL 1610.0111
ILE 1620.0129
ALA 1630.0136
GLU 1640.0124
ASP 1650.0124
ALA 1660.0125
CYS 1670.0101
SER 1680.0076
ALA 1690.0067
ALA 1700.0126
SER 1710.0164
ALA 1720.0182
GLU 1730.0230
GLN 1740.0170
HIS 1750.0096
ASN 1760.0121
ASN 1770.0115
SER 1780.0057
ILE 1790.0045
ASN 1800.0038
HIS 1810.0057
ILE 1820.0070
TYR 1830.0073
PRO 1840.0068
ARG 1850.0084
ILE 1860.0095
ALA 1870.0090
ARG 1880.0126
VAL 1890.0135
ARG 1900.0132
SER 1910.0171
VAL 1920.0235
GLU 1930.0225
GLU 1940.0202
ILE 1950.0197
LEU 1960.0242
ASN 1970.0184
ALA 1980.0106
LEU 1990.0147
LEU 150.0246
ASN 160.0228
ALA 170.0173
LYS 180.0173
THR 190.0148
THR 200.0146
ALA 210.0138
LEU 220.0145
VAL 230.0048
VAL 240.0029
ILE 250.0019
ASP 260.0027
LEU 270.0091
GLN 280.0090
GLU 290.0098
GLY 300.0113
ILE 310.0175
LEU 320.0150
PRO 330.0194
PHE 340.0192
ALA 350.0088
GLY 360.0099
GLY 370.0095
PRO 380.0139
HIS 390.0056
THR 400.0089
ALA 410.0167
ASP 420.0195
GLU 430.0054
VAL 440.0103
VAL 450.0159
ASN 460.0115
ARG 470.0108
ALA 480.0119
GLY 490.0119
LYS 500.0117
LEU 510.0055
ALA 520.0019
ALA 530.0043
LYS 540.0073
PHE 550.0101
ARG 560.0131
ALA 570.0174
SER 580.0166
GLY 590.0119
GLN 600.0119
PRO 610.0125
VAL 620.0155
PHE 630.0112
LEU 640.0105
VAL 650.0054
ARG 660.0034
VAL 670.0074
GLY 680.0059
TRP 690.0075
SER 700.0132
ALA 710.0170
ASP 720.0175
TYR 730.0101
ALA 740.0166
GLU 750.0075
ALA 760.0036
LEU 770.0069
LYS 780.0121
GLN 790.0088
PRO 800.0093
VAL 810.0065
ASP 820.0060
ALA 830.0174
PRO 840.0125
SER 850.0122
PRO 860.0214
ALA 870.0262
LYS 880.0208
VAL 890.0057
LEU 900.0099
PRO 910.0105
GLU 920.0155
ASN 930.0131
TRP 940.0116
TRP 950.0070
GLN 960.0077
HIS 970.0104
PRO 980.0139
ALA 990.0144
ALA 1000.0195
LEU 1010.0186
GLY 1020.0181
THR 1030.0260
THR 1040.0215
ASP 1050.0327
SER 1060.0210
ASP 1070.0212
ILE 1080.0166
GLU 1090.0146
ILE 1100.0107
ILE 1110.0029
LYS 1120.0023
ARG 1130.0024
GLN 1140.0007
TRP 1150.0026
GLY 1160.0024
ALA 1170.0053
PHE 1180.0065
TYR 1190.0054
GLY 1200.0046
THR 1210.0054
ASP 1220.0057
LEU 1230.0075
GLU 1240.0064
LEU 1250.0044
GLN 1260.0057
LEU 1270.0079
ARG 1280.0064
ARG 1290.0055
ARG 1300.0081
GLY 1310.0131
ILE 1320.0144
ASP 1330.0165
THR 1340.0173
ILE 1350.0104
VAL 1360.0095
LEU 1370.0116
CYS 1380.0131
GLY 1390.0106
ILE 1400.0076
SER 1410.0066
THR 1420.0077
ASN 1430.0018
ILE 1440.0018
GLY 1450.0024
VAL 1460.0031
GLU 1470.0025
SER 1480.0027
THR 1490.0044
ALA 1500.0041
ARG 1510.0032
ASN 1520.0060
ALA 1530.0063
TRP 1540.0055
GLU 1550.0061
LEU 1560.0082
GLY 1570.0091
PHE 1580.0099
ASN 1590.0119
LEU 1600.0104
VAL 1610.0090
ILE 1620.0123
ALA 1630.0206
GLU 1640.0191
ASP 1650.0186
ALA 1660.0187
CYS 1670.0144
SER 1680.0071
ALA 1690.0028
ALA 1700.0073
SER 1710.0156
ALA 1720.0208
GLU 1730.0205
GLN 1740.0065
HIS 1750.0088
ASN 1760.0127
ASN 1770.0055
SER 1780.0091
ILE 1790.0072
ASN 1800.0044
HIS 1810.0032
ILE 1820.0051
TYR 1830.0029
PRO 1840.0041
ARG 1850.0052
ILE 1860.0050
ALA 1870.0066
ARG 1880.0058
VAL 1890.0116
ARG 1900.0174
SER 1910.0213
VAL 1920.0209
GLU 1930.0210
GLU 1940.0158
ILE 1950.0090
LEU 1960.0058
ASN 1970.0079
ALA 1980.0058
LEU 1990.0089
LEU 130.0203
GLU 140.0218
LEU 150.0118
ASN 160.0113
ALA 170.0152
LYS 180.0134
THR 190.0086
THR 200.0080
ALA 210.0079
LEU 220.0081
VAL 230.0090
VAL 240.0092
ILE 250.0088
ASP 260.0070
LEU 270.0054
GLN 280.0049
GLU 290.0126
GLY 300.0102
ILE 310.0129
LEU 320.0168
PRO 330.0264
PHE 340.0255
ALA 350.0076
GLY 360.0084
GLY 370.0036
PRO 380.0046
HIS 390.0059
THR 400.0058
ALA 410.0085
ASP 420.0101
GLU 430.0096
VAL 440.0088
VAL 450.0105
ASN 460.0107
ARG 470.0106
ALA 480.0111
GLY 490.0076
LYS 500.0086
LEU 510.0070
ALA 520.0074
ALA 530.0076
LYS 540.0091
PHE 550.0102
ARG 560.0123
ALA 570.0248
SER 580.0217
GLY 590.0232
GLN 600.0160
PRO 610.0098
VAL 620.0109
PHE 630.0125
LEU 640.0145
VAL 650.0134
ARG 660.0106
VAL 670.0112
GLY 680.0105
TRP 690.0111
SER 700.0153
ALA 710.0143
ASP 720.0137
TYR 730.0089
ALA 740.0124
GLU 750.0127
ALA 760.0107
LEU 770.0058
LYS 780.0026
GLN 790.0049
PRO 800.0096
VAL 810.0098
ASP 820.0146
ALA 830.0160
PRO 840.0137
SER 850.0047
PRO 860.0083
ALA 870.0038
LYS 880.0090
VAL 890.0137
LEU 900.0128
PRO 910.0128
GLU 920.0285
ASN 930.0158
TRP 940.0087
TRP 950.0057
GLN 960.0095
HIS 970.0076
PRO 980.0147
ALA 990.0160
ALA 1000.0188
LEU 1010.0102
GLY 1020.0084
THR 1030.0034
THR 1040.0051
ASP 1050.0155
SER 1060.0077
ASP 1070.0094
ILE 1080.0134
GLU 1090.0183
ILE 1100.0176
ILE 1110.0155
LYS 1120.0144
ARG 1130.0100
GLN 1140.0093
TRP 1150.0102
GLY 1160.0127
ALA 1170.0085
PHE 1180.0070
TYR 1190.0064
GLY 1200.0070
THR 1210.0055
ASP 1220.0049
LEU 1230.0043
GLU 1240.0033
LEU 1250.0046
GLN 1260.0050
LEU 1270.0045
ARG 1280.0025
ARG 1290.0048
ARG 1300.0071
GLY 1310.0060
ILE 1320.0051
ASP 1330.0044
THR 1340.0050
ILE 1350.0049
VAL 1360.0072
LEU 1370.0052
CYS 1380.0037
GLY 1390.0031
ILE 1400.0031
SER 1410.0058
THR 1420.0039
ASN 1430.0051
ILE 1440.0069
GLY 1450.0093
VAL 1460.0091
GLU 1470.0090
SER 1480.0090
THR 1490.0088
ALA 1500.0091
ARG 1510.0075
ASN 1520.0065
ALA 1530.0054
TRP 1540.0058
GLU 1550.0051
LEU 1560.0045
GLY 1570.0042
PHE 1580.0029
ASN 1590.0055
LEU 1600.0061
VAL 1610.0069
ILE 1620.0062
ALA 1630.0055
GLU 1640.0042
ASP 1650.0053
ALA 1660.0055
CYS 1670.0038
SER 1680.0028
ALA 1690.0054
ALA 1700.0043
SER 1710.0020
ALA 1720.0032
GLU 1730.0016
GLN 1740.0010
HIS 1750.0020
ASN 1760.0020
ASN 1770.0041
SER 1780.0051
ILE 1790.0058
ASN 1800.0050
HIS 1810.0085
ILE 1820.0081
TYR 1830.0084
PRO 1840.0088
ARG 1850.0089
ILE 1860.0073
ALA 1870.0090
ARG 1880.0113
VAL 1890.0087
ARG 1900.0081
SER 1910.0081
VAL 1920.0103
GLU 1930.0112
GLU 1940.0100
ILE 1950.0092
LEU 1960.0109
ASN 1970.0150
ALA 1980.0095
LEU 1990.0091
MET 120.0205
LEU 130.0126
GLU 140.0133
LEU 150.0117
ASN 160.0122
ALA 170.0123
LYS 180.0125
THR 190.0146
THR 200.0089
ALA 210.0087
LEU 220.0084
VAL 230.0079
VAL 240.0088
ILE 250.0085
ASP 260.0079
LEU 270.0076
GLN 280.0095
GLU 290.0076
GLY 300.0023
ILE 310.0059
LEU 320.0067
PRO 330.0035
PHE 340.0022
ALA 350.0047
GLY 360.0117
GLY 370.0096
PRO 380.0105
HIS 390.0102
THR 400.0212
ALA 410.0276
ASP 420.0325
GLU 430.0195
VAL 440.0151
VAL 450.0230
ASN 460.0198
ARG 470.0153
ALA 480.0160
GLY 490.0151
LYS 500.0138
LEU 510.0161
ALA 520.0091
ALA 530.0096
LYS 540.0111
PHE 550.0045
ARG 560.0076
ALA 570.0176
SER 580.0178
GLY 590.0161
GLN 600.0125
PRO 610.0127
VAL 620.0114
PHE 630.0120
LEU 640.0089
VAL 650.0091
ARG 660.0095
VAL 670.0098
GLY 680.0077
TRP 690.0030
SER 700.0142
ALA 710.0218
ASP 720.0221
TYR 730.0127
ALA 740.0128
GLU 750.0038
ALA 760.0068
LEU 770.0060
LYS 780.0062
GLN 790.0055
PRO 800.0108
VAL 810.0108
ASP 820.0130
ALA 830.0120
PRO 840.0133
SER 850.0206
PRO 860.0196
ALA 870.0307
LYS 880.0173
VAL 890.0077
LEU 900.0120
PRO 910.0084
GLU 920.0140
ASN 930.0108
TRP 940.0039
TRP 950.0080
GLN 960.0081
HIS 970.0098
PRO 980.0124
ALA 990.0153
ALA 1000.0139
LEU 1010.0108
GLY 1020.0082
THR 1030.0043
THR 1040.0167
ASP 1050.0213
SER 1060.0078
ASP 1070.0117
ILE 1080.0123
GLU 1090.0120
ILE 1100.0102
ILE 1110.0106
LYS 1120.0081
ARG 1130.0082
GLN 1140.0081
TRP 1150.0083
GLY 1160.0084
ALA 1170.0082
PHE 1180.0072
TYR 1190.0072
GLY 1200.0074
THR 1210.0092
ASP 1220.0105
LEU 1230.0100
GLU 1240.0095
LEU 1250.0099
GLN 1260.0146
LEU 1270.0156
ARG 1280.0140
ARG 1290.0154
ARG 1300.0224
GLY 1310.0242
ILE 1320.0173
ASP 1330.0139
THR 1340.0108
ILE 1350.0106
VAL 1360.0058
LEU 1370.0049
CYS 1380.0054
GLY 1390.0065
ILE 1400.0061
SER 1410.0058
THR 1420.0053
ASN 1430.0055
ILE 1440.0074
GLY 1450.0070
VAL 1460.0069
GLU 1470.0069
SER 1480.0071
THR 1490.0063
ALA 1500.0059
ARG 1510.0063
ASN 1520.0068
ALA 1530.0055
TRP 1540.0046
GLU 1550.0052
LEU 1560.0052
GLY 1570.0063
PHE 1580.0072
ASN 1590.0084
LEU 1600.0049
VAL 1610.0036
ILE 1620.0052
ALA 1630.0071
GLU 1640.0080
ASP 1650.0040
ALA 1660.0069
CYS 1670.0056
SER 1680.0036
ALA 1690.0031
ALA 1700.0051
SER 1710.0053
ALA 1720.0064
GLU 1730.0060
GLN 1740.0025
HIS 1750.0026
ASN 1760.0044
ASN 1770.0041
SER 1780.0037
ILE 1790.0039
ASN 1800.0056
HIS 1810.0053
ILE 1820.0052
TYR 1830.0052
PRO 1840.0103
ARG 1850.0080
ILE 1860.0062
ALA 1870.0074
ARG 1880.0066
VAL 1890.0067
ARG 1900.0075
SER 1910.0114
VAL 1920.0162
GLU 1930.0162
GLU 1940.0140
ILE 1950.0125
LEU 1960.0149
ASN 1970.0150
ALA 1980.0123
LEU 1990.0101

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.