CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  apo-dimer-test  ***

<R2> analysis for 2601021904551024081

---  normal mode 100  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0429
SER 10.0048
GLY 20.0049
PHE 30.0049
ARG 40.0049
LYS 50.0033
MET 60.0024
ALA 70.0031
PHE 80.0028
PRO 90.0045
SER 100.0062
GLY 110.0068
LYS 120.0087
VAL 130.0123
GLU 140.0126
GLY 150.0139
CYS 160.0171
MET 170.0022
VAL 180.0017
GLN 190.0035
VAL 200.0043
THR 210.0061
CYS 220.0117
GLY 230.0328
THR 240.0429
THR 250.0126
THR 260.0096
LEU 270.0100
ASN 280.0095
GLY 290.0095
LEU 300.0089
TRP 310.0093
LEU 320.0107
ASP 330.0165
ASP 340.0108
VAL 350.0137
VAL 360.0117
TYR 370.0042
CYS 380.0044
PRO 390.0049
ARG 400.0050
HID 410.0130
VAL 420.0111
ILE 430.0133
CYS 440.0145
THR 450.0256
SER 460.0144
GLU 470.0212
ASP 480.0225
MET 490.0146
LEU 500.0089
ASN 510.0012
PRO 520.0100
ASN 530.0262
TYR 540.0127
GLU 550.0269
ASP 560.0187
LEU 570.0068
LEU 580.0145
ILE 590.0097
ARG 600.0156
LYS 610.0213
SER 620.0185
ASN 630.0121
HIE 640.0307
ASN 650.0094
PHE 660.0070
LEU 670.0120
VAL 680.0136
GLN 690.0079
ALA 700.0102
GLY 710.0242
ASN 720.0299
VAL 730.0103
GLN 740.0134
LEU 750.0073
ARG 760.0153
VAL 770.0179
ILE 780.0158
GLY 790.0124
HID 800.0100
SER 810.0029
MET 820.0049
GLN 830.0079
ASN 840.0082
CYS 850.0031
VAL 860.0030
LEU 870.0021
LYS 880.0041
LEU 890.0119
LYS 900.0135
VAL 910.0122
ASP 920.0155
THR 930.0136
ALA 940.0212
ASN 950.0267
PRO 960.0406
LYS 970.0272
THR 980.0197
PRO 990.0140
LYS 1000.0182
TYR 1010.0150
LYS 1020.0089
PHE 1030.0031
VAL 1040.0040
ARG 1050.0204
ILE 1060.0159
GLN 1070.0177
PRO 1080.0157
GLY 1090.0119
GLN 1100.0095
THR 1110.0056
PHE 1120.0044
SER 1130.0026
VAL 1140.0033
LEU 1150.0029
ALA 1160.0036
CYS 1170.0037
TYR 1180.0053
ASN 1190.0066
GLY 1200.0050
SER 1210.0038
PRO 1220.0016
SER 1230.0011
GLY 1240.0039
VAL 1250.0014
TYR 1260.0009
GLN 1270.0012
CYS 1280.0014
ALA 1290.0061
MET 1300.0086
ARG 1310.0094
PRO 1320.0130
ASN 1330.0117
PHE 1340.0097
THR 1350.0036
ILE 1360.0041
LYS 1370.0051
GLY 1380.0066
SER 1390.0082
PHE 1400.0095
LEU 1410.0148
ASN 1420.0204
GLY 1430.0177
SER 1440.0082
CYS 1450.0081
GLY 1460.0080
SER 1470.0081
VAL 1480.0090
GLY 1490.0085
PHE 1500.0071
ASN 1510.0085
ILE 1520.0097
ASP 1530.0198
TYR 1540.0134
ASP 1550.0126
CYS 1560.0214
VAL 1570.0140
SER 1580.0089
PHE 1590.0075
CYS 1600.0064
TYR 1610.0123
MET 1620.0112
HIE 1630.0101
HIE 1640.0085
MET 1650.0100
GLU 1660.0123
LEU 1670.0118
PRO 1680.0135
THR 1690.0135
GLY 1700.0149
VAL 1710.0126
HIE 1720.0122
ALA 1730.0086
GLY 1740.0113
THR 1750.0136
ASP 1760.0180
LEU 1770.0150
GLU 1780.0155
GLY 1790.0151
ASN 1800.0135
PHE 1810.0100
TYR 1820.0092
GLY 1830.0071
PRO 1840.0058
PHE 1850.0058
VAL 1860.0059
ASP 1870.0061
ARG 1880.0039
GLN 1890.0102
THR 1900.0104
ALA 1910.0153
GLN 1920.0170
ALA 1930.0056
ALA 1940.0064
GLY 1950.0025
THR 1960.0085
ASP 1970.0090
THR 1980.0069
THR 1990.0067
ILE 2000.0052
THR 2010.0006
VAL 2020.0014
ASN 2030.0024
VAL 2040.0018
LEU 2050.0015
ALA 2060.0020
TRP 2070.0017
LEU 2080.0012
TYR 2090.0022
ALA 2100.0037
ALA 2110.0032
VAL 2120.0033
ILE 2130.0068
ASN 2140.0051
GLY 2150.0008
ASP 2160.0048
ARG 2170.0062
TRP 2180.0082
PHE 2190.0055
LEU 2200.0060
ASN 2210.0045
ARG 2220.0052
PHE 2230.0103
THR 2240.0144
THR 2250.0053
THR 2260.0052
LEU 2270.0048
ASN 2280.0072
ASP 2290.0077
PHE 2300.0027
ASN 2310.0022
LEU 2320.0050
VAL 2330.0055
ALA 2340.0043
MET 2350.0038
LYS 2360.0095
TYR 2370.0019
ASN 2380.0024
TYR 2390.0029
GLU 2400.0049
PRO 2410.0117
LEU 2420.0074
THR 2430.0113
GLN 2440.0130
ASP 2450.0065
HIE 2460.0026
VAL 2470.0049
ASP 2480.0080
ILE 2490.0060
LEU 2500.0031
GLY 2510.0043
PRO 2520.0023
LEU 2530.0064
SER 2540.0096
ALA 2550.0150
GLN 2560.0158
THR 2570.0112
GLY 2580.0125
ILE 2590.0090
ALA 2600.0089
VAL 2610.0034
LEU 2620.0033
ASP 2630.0031
MET 2640.0020
CYS 2650.0038
ALA 2660.0042
SER 2670.0044
LEU 2680.0032
LYS 2690.0044
GLU 2700.0046
LEU 2710.0037
LEU 2720.0025
GLN 2730.0046
ASN 2740.0068
GLY 2750.0034
MET 2760.0034
ASN 2770.0111
GLY 2780.0145
ARG 2790.0089
THR 2800.0102
ILE 2810.0046
LEU 2820.0038
GLY 2830.0051
SER 2840.0052
ALA 2850.0053
LEU 2860.0039
LEU 2870.0027
GLU 2880.0028
ASP 2890.0049
GLU 2900.0055
PHE 2910.0051
THR 2920.0049
PRO 2930.0045
PHE 2940.0060
ASP 2950.0076
VAL 2960.0055
VAL 2970.0043
ARG 2980.0051
GLN 2990.0068
CYS 3000.0062
SER 3010.0053
GLY 3020.0052
VAL 3030.0052
THR 3040.0052
PHE 3050.0026
GLN 3060.0031
SER 3070.0015
GLY 3080.0013
PHE 3090.0051
ARG 3100.0053
LYS 3110.0056
MET 3120.0059
ALA 3130.0021
PHE 3140.0020
PRO 3150.0022
SER 3160.0023
GLY 3170.0040
LYS 3180.0035
VAL 3190.0026
GLU 3200.0025
GLY 3210.0019
CYS 3220.0027
MET 3230.0022
VAL 3240.0028
GLN 3250.0030
VAL 3260.0026
THR 3270.0027
CYS 3280.0024
GLY 3290.0059
THR 3300.0058
THR 3310.0044
THR 3320.0025
LEU 3330.0015
ASN 3340.0014
GLY 3350.0015
LEU 3360.0014
TRP 3370.0052
LEU 3380.0049
ASP 3390.0053
ASP 3400.0065
VAL 3410.0016
VAL 3420.0014
TYR 3430.0015
CYS 3440.0017
PRO 3450.0007
ARG 3460.0003
HID 3470.0011
VAL 3480.0014
ILE 3490.0024
CYS 3500.0030
THR 3510.0060
SER 3520.0067
GLU 3530.0044
ASP 3540.0050
MET 3550.0048
LEU 3560.0105
ASN 3570.0081
PRO 3580.0049
ASN 3590.0056
TYR 3600.0018
GLU 3610.0031
ASP 3620.0022
LEU 3630.0013
LEU 3640.0010
ILE 3650.0054
ARG 3660.0034
LYS 3670.0053
SER 3680.0086
ASN 3690.0021
HIE 3700.0048
ASN 3710.0065
PHE 3720.0041
LEU 3730.0033
VAL 3740.0040
GLN 3750.0031
ALA 3760.0037
GLY 3770.0074
ASN 3780.0106
VAL 3790.0087
GLN 3800.0085
LEU 3810.0100
ARG 3820.0092
VAL 3830.0056
ILE 3840.0100
GLY 3850.0027
HID 3860.0024
SER 3870.0031
MET 3880.0030
GLN 3890.0074
ASN 3900.0070
CYS 3910.0042
VAL 3920.0034
LEU 3930.0015
LYS 3940.0024
LEU 3950.0025
LYS 3960.0035
VAL 3970.0016
ASP 3980.0044
THR 3990.0087
ALA 4000.0119
ASN 4010.0076
PRO 4020.0059
LYS 4030.0064
THR 4040.0029
PRO 4050.0052
LYS 4060.0081
TYR 4070.0070
LYS 4080.0080
PHE 4090.0058
VAL 4100.0049
ARG 4110.0043
ILE 4120.0036
GLN 4130.0043
PRO 4140.0049
GLY 4150.0052
GLN 4160.0045
THR 4170.0036
PHE 4180.0022
SER 4190.0014
VAL 4200.0018
LEU 4210.0017
ALA 4220.0014
CYS 4230.0020
TYR 4240.0023
ASN 4250.0029
GLY 4260.0027
SER 4270.0024
PRO 4280.0019
SER 4290.0018
GLY 4300.0009
VAL 4310.0013
TYR 4320.0020
GLN 4330.0036
CYS 4340.0036
ALA 4350.0035
MET 4360.0029
ARG 4370.0034
PRO 4380.0030
ASN 4390.0027
PHE 4400.0029
THR 4410.0012
ILE 4420.0015
LYS 4430.0017
GLY 4440.0023
SER 4450.0046
PHE 4460.0040
LEU 4470.0050
ASN 4480.0048
GLY 4490.0016
SER 4500.0019
CYS 4510.0013
GLY 4520.0016
SER 4530.0018
VAL 4540.0017
GLY 4550.0019
PHE 4560.0019
ASN 4570.0031
ILE 4580.0039
ASP 4590.0044
TYR 4600.0062
ASP 4610.0092
CYS 4620.0078
VAL 4630.0067
SER 4640.0062
PHE 4650.0027
CYS 4660.0024
TYR 4670.0027
MET 4680.0032
HIE 4690.0018
HIE 4700.0012
MET 4710.0007
GLU 4720.0004
LEU 4730.0065
PRO 4740.0162
THR 4750.0180
GLY 4760.0128
VAL 4770.0046
HIE 4780.0035
ALA 4790.0035
GLY 4800.0041
THR 4810.0045
ASP 4820.0049
LEU 4830.0058
GLU 4840.0069
GLY 4850.0068
ASN 4860.0066
PHE 4870.0050
TYR 4880.0036
GLY 4890.0049
PRO 4900.0045
PHE 4910.0041
VAL 4920.0042
ASP 4930.0044
ARG 4940.0052
GLN 4950.0084
THR 4960.0092
ALA 4970.0135
GLN 4980.0072
ALA 4990.0060
ALA 5000.0026
GLY 5010.0038
THR 5020.0044
ASP 5030.0052
THR 5040.0063
THR 5050.0044
ILE 5060.0022
THR 5070.0036
VAL 5080.0033
ASN 5090.0019
VAL 5100.0034
LEU 5110.0039
ALA 5120.0030
TRP 5130.0033
LEU 5140.0039
TYR 5150.0029
ALA 5160.0025
ALA 5170.0017
VAL 5180.0052
ILE 5190.0067
ASN 5200.0086
GLY 5210.0209
ASP 5220.0103
ARG 5230.0137
TRP 5240.0156
PHE 5250.0090
LEU 5260.0051
ASN 5270.0071
ARG 5280.0147
PHE 5290.0213
THR 5300.0199
THR 5310.0181
THR 5320.0189
LEU 5330.0065
ASN 5340.0114
ASP 5350.0113
PHE 5360.0090
ASN 5370.0063
LEU 5380.0095
VAL 5390.0104
ALA 5400.0056
MET 5410.0128
LYS 5420.0162
TYR 5430.0089
ASN 5440.0112
TYR 5450.0032
GLU 5460.0025
PRO 5470.0053
LEU 5480.0067
THR 5490.0140
GLN 5500.0095
ASP 5510.0095
HIE 5520.0085
VAL 5530.0056
ASP 5540.0094
ILE 5550.0113
LEU 5560.0078
GLY 5570.0063
PRO 5580.0057
LEU 5590.0049
SER 5600.0033
ALA 5610.0062
GLN 5620.0084
THR 5630.0066
GLY 5640.0058
ILE 5650.0069
ALA 5660.0085
VAL 5670.0060
LEU 5680.0056
ASP 5690.0052
MET 5700.0027
CYS 5710.0025
ALA 5720.0053
SER 5730.0045
LEU 5740.0063
LYS 5750.0078
GLU 5760.0101
LEU 5770.0060
LEU 5780.0060
GLN 5790.0060
ASN 5800.0063
GLY 5810.0138
MET 5820.0103
ASN 5830.0226
GLY 5840.0191
ARG 5850.0153
THR 5860.0125
ILE 5870.0090
LEU 5880.0101
GLY 5890.0132
SER 5900.0094
ALA 5910.0085
LEU 5920.0059
LEU 5930.0042
GLU 5940.0028
ASP 5950.0026
GLU 5960.0036
PHE 5970.0054
THR 5980.0050
PRO 5990.0037
PHE 6000.0068
ASP 6010.0075
VAL 6020.0062
VAL 6030.0074
ARG 6040.0085
GLN 6050.0102
CYS 6060.0097
SER 6070.0106
GLY 6080.0117
VAL 6090.0082
THR 6100.0043
PHE 6110.0030
GLN 6120.0062

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.