CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  apo-dimer-test  ***

<R2> analysis for 2601021904551024081

---  normal mode 106  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0370
SER 10.0078
GLY 20.0044
PHE 30.0041
ARG 40.0045
LYS 50.0029
MET 60.0046
ALA 70.0050
PHE 80.0075
PRO 90.0073
SER 100.0070
GLY 110.0049
LYS 120.0040
VAL 130.0035
GLU 140.0039
GLY 150.0031
CYS 160.0037
MET 170.0057
VAL 180.0057
GLN 190.0057
VAL 200.0054
THR 210.0042
CYS 220.0127
GLY 230.0251
THR 240.0286
THR 250.0050
THR 260.0053
LEU 270.0038
ASN 280.0038
GLY 290.0057
LEU 300.0046
TRP 310.0043
LEU 320.0031
ASP 330.0058
ASP 340.0052
VAL 350.0054
VAL 360.0056
TYR 370.0030
CYS 380.0022
PRO 390.0051
ARG 400.0067
HID 410.0049
VAL 420.0033
ILE 430.0050
CYS 440.0037
THR 450.0161
SER 460.0087
GLU 470.0105
ASP 480.0147
MET 490.0079
LEU 500.0055
ASN 510.0082
PRO 520.0114
ASN 530.0077
TYR 540.0026
GLU 550.0037
ASP 560.0016
LEU 570.0072
LEU 580.0076
ILE 590.0130
ARG 600.0182
LYS 610.0054
SER 620.0074
ASN 630.0087
HIE 640.0118
ASN 650.0031
PHE 660.0029
LEU 670.0035
VAL 680.0077
GLN 690.0091
ALA 700.0059
GLY 710.0054
ASN 720.0055
VAL 730.0046
GLN 740.0107
LEU 750.0132
ARG 760.0196
VAL 770.0091
ILE 780.0097
GLY 790.0064
HID 800.0090
SER 810.0209
MET 820.0183
GLN 830.0260
ASN 840.0278
CYS 850.0153
VAL 860.0109
LEU 870.0084
LYS 880.0121
LEU 890.0071
LYS 900.0082
VAL 910.0083
ASP 920.0107
THR 930.0082
ALA 940.0091
ASN 950.0082
PRO 960.0115
LYS 970.0075
THR 980.0075
PRO 990.0147
LYS 1000.0184
TYR 1010.0128
LYS 1020.0089
PHE 1030.0056
VAL 1040.0055
ARG 1050.0134
ILE 1060.0128
GLN 1070.0121
PRO 1080.0124
GLY 1090.0131
GLN 1100.0118
THR 1110.0110
PHE 1120.0087
SER 1130.0051
VAL 1140.0046
LEU 1150.0039
ALA 1160.0040
CYS 1170.0077
TYR 1180.0064
ASN 1190.0056
GLY 1200.0055
SER 1210.0054
PRO 1220.0046
SER 1230.0038
GLY 1240.0035
VAL 1250.0035
TYR 1260.0045
GLN 1270.0067
CYS 1280.0088
ALA 1290.0124
MET 1300.0102
ARG 1310.0072
PRO 1320.0037
ASN 1330.0024
PHE 1340.0041
THR 1350.0044
ILE 1360.0059
LYS 1370.0075
GLY 1380.0089
SER 1390.0101
PHE 1400.0105
LEU 1410.0169
ASN 1420.0162
GLY 1430.0103
SER 1440.0114
CYS 1450.0041
GLY 1460.0031
SER 1470.0041
VAL 1480.0039
GLY 1490.0020
PHE 1500.0032
ASN 1510.0047
ILE 1520.0071
ASP 1530.0247
TYR 1540.0245
ASP 1550.0193
CYS 1560.0159
VAL 1570.0092
SER 1580.0063
PHE 1590.0051
CYS 1600.0043
TYR 1610.0047
MET 1620.0051
HIE 1630.0073
HIE 1640.0084
MET 1650.0094
GLU 1660.0068
LEU 1670.0104
PRO 1680.0162
THR 1690.0191
GLY 1700.0085
VAL 1710.0053
HIE 1720.0064
ALA 1730.0083
GLY 1740.0087
THR 1750.0085
ASP 1760.0105
LEU 1770.0115
GLU 1780.0191
GLY 1790.0169
ASN 1800.0232
PHE 1810.0059
TYR 1820.0059
GLY 1830.0061
PRO 1840.0038
PHE 1850.0034
VAL 1860.0042
ASP 1870.0031
ARG 1880.0029
GLN 1890.0148
THR 1900.0154
ALA 1910.0149
GLN 1920.0129
ALA 1930.0327
ALA 1940.0161
GLY 1950.0182
THR 1960.0136
ASP 1970.0115
THR 1980.0104
THR 1990.0095
ILE 2000.0048
THR 2010.0053
VAL 2020.0048
ASN 2030.0074
VAL 2040.0082
LEU 2050.0033
ALA 2060.0037
TRP 2070.0043
LEU 2080.0043
TYR 2090.0079
ALA 2100.0078
ALA 2110.0073
VAL 2120.0075
ILE 2130.0110
ASN 2140.0153
GLY 2150.0122
ASP 2160.0151
ARG 2170.0190
TRP 2180.0183
PHE 2190.0094
LEU 2200.0187
ASN 2210.0181
ARG 2220.0167
PHE 2230.0267
THR 2240.0370
THR 2250.0064
THR 2260.0032
LEU 2270.0023
ASN 2280.0056
ASP 2290.0069
PHE 2300.0054
ASN 2310.0066
LEU 2320.0072
VAL 2330.0135
ALA 2340.0114
MET 2350.0125
LYS 2360.0122
TYR 2370.0073
ASN 2380.0074
TYR 2390.0068
GLU 2400.0095
PRO 2410.0160
LEU 2420.0101
THR 2430.0162
GLN 2440.0199
ASP 2450.0134
HIE 2460.0083
VAL 2470.0098
ASP 2480.0137
ILE 2490.0039
LEU 2500.0044
GLY 2510.0065
PRO 2520.0100
LEU 2530.0177
SER 2540.0176
ALA 2550.0269
GLN 2560.0311
THR 2570.0208
GLY 2580.0182
ILE 2590.0117
ALA 2600.0073
VAL 2610.0057
LEU 2620.0058
ASP 2630.0066
MET 2640.0065
CYS 2650.0071
ALA 2660.0072
SER 2670.0055
LEU 2680.0029
LYS 2690.0055
GLU 2700.0038
LEU 2710.0044
LEU 2720.0061
GLN 2730.0068
ASN 2740.0089
GLY 2750.0114
MET 2760.0096
ASN 2770.0130
GLY 2780.0107
ARG 2790.0082
THR 2800.0076
ILE 2810.0020
LEU 2820.0022
GLY 2830.0007
SER 2840.0033
ALA 2850.0083
LEU 2860.0095
LEU 2870.0104
GLU 2880.0099
ASP 2890.0107
GLU 2900.0111
PHE 2910.0109
THR 2920.0105
PRO 2930.0084
PHE 2940.0089
ASP 2950.0101
VAL 2960.0085
VAL 2970.0084
ARG 2980.0084
GLN 2990.0090
CYS 3000.0095
SER 3010.0078
GLY 3020.0068
VAL 3030.0089
THR 3040.0093
PHE 3050.0034
GLN 3060.0019
SER 3070.0041
GLY 3080.0041
PHE 3090.0050
ARG 3100.0052
LYS 3110.0049
MET 3120.0053
ALA 3130.0027
PHE 3140.0031
PRO 3150.0037
SER 3160.0055
GLY 3170.0040
LYS 3180.0039
VAL 3190.0035
GLU 3200.0042
GLY 3210.0043
CYS 3220.0044
MET 3230.0037
VAL 3240.0035
GLN 3250.0022
VAL 3260.0023
THR 3270.0048
CYS 3280.0075
GLY 3290.0159
THR 3300.0144
THR 3310.0092
THR 3320.0044
LEU 3330.0019
ASN 3340.0017
GLY 3350.0018
LEU 3360.0016
TRP 3370.0047
LEU 3380.0045
ASP 3390.0057
ASP 3400.0079
VAL 3410.0022
VAL 3420.0020
TYR 3430.0025
CYS 3440.0025
PRO 3450.0036
ARG 3460.0043
HID 3470.0039
VAL 3480.0044
ILE 3490.0114
CYS 3500.0101
THR 3510.0096
SER 3520.0096
GLU 3530.0034
ASP 3540.0045
MET 3550.0047
LEU 3560.0082
ASN 3570.0080
PRO 3580.0055
ASN 3590.0098
TYR 3600.0120
GLU 3610.0105
ASP 3620.0064
LEU 3630.0050
LEU 3640.0077
ILE 3650.0077
ARG 3660.0032
LYS 3670.0066
SER 3680.0076
ASN 3690.0090
HIE 3700.0077
ASN 3710.0050
PHE 3720.0051
LEU 3730.0065
VAL 3740.0050
GLN 3750.0047
ALA 3760.0069
GLY 3770.0159
ASN 3780.0089
VAL 3790.0119
GLN 3800.0153
LEU 3810.0121
ARG 3820.0154
VAL 3830.0148
ILE 3840.0160
GLY 3850.0079
HID 3860.0049
SER 3870.0058
MET 3880.0039
GLN 3890.0058
ASN 3900.0045
CYS 3910.0029
VAL 3920.0039
LEU 3930.0020
LYS 3940.0027
LEU 3950.0018
LYS 3960.0029
VAL 3970.0052
ASP 3980.0040
THR 3990.0101
ALA 4000.0138
ASN 4010.0154
PRO 4020.0159
LYS 4030.0231
THR 4040.0141
PRO 4050.0093
LYS 4060.0095
TYR 4070.0102
LYS 4080.0117
PHE 4090.0063
VAL 4100.0050
ARG 4110.0053
ILE 4120.0072
GLN 4130.0163
PRO 4140.0171
GLY 4150.0148
GLN 4160.0125
THR 4170.0069
PHE 4180.0067
SER 4190.0068
VAL 4200.0069
LEU 4210.0054
ALA 4220.0047
CYS 4230.0076
TYR 4240.0103
ASN 4250.0100
GLY 4260.0084
SER 4270.0086
PRO 4280.0071
SER 4290.0089
GLY 4300.0075
VAL 4310.0065
TYR 4320.0045
GLN 4330.0060
CYS 4340.0075
ALA 4350.0082
MET 4360.0092
ARG 4370.0096
PRO 4380.0092
ASN 4390.0100
PHE 4400.0111
THR 4410.0022
ILE 4420.0027
LYS 4430.0045
GLY 4440.0050
SER 4450.0021
PHE 4460.0082
LEU 4470.0166
ASN 4480.0240
GLY 4490.0118
SER 4500.0081
CYS 4510.0052
GLY 4520.0005
SER 4530.0014
VAL 4540.0033
GLY 4550.0049
PHE 4560.0068
ASN 4570.0069
ILE 4580.0045
ASP 4590.0033
TYR 4600.0057
ASP 4610.0071
CYS 4620.0075
VAL 4630.0083
SER 4640.0091
PHE 4650.0064
CYS 4660.0066
TYR 4670.0065
MET 4680.0064
HIE 4690.0062
HIE 4700.0076
MET 4710.0102
GLU 4720.0121
LEU 4730.0073
PRO 4740.0106
THR 4750.0125
GLY 4760.0140
VAL 4770.0067
HIE 4780.0072
ALA 4790.0075
GLY 4800.0081
THR 4810.0073
ASP 4820.0076
LEU 4830.0073
GLU 4840.0073
GLY 4850.0066
ASN 4860.0065
PHE 4870.0074
TYR 4880.0056
GLY 4890.0122
PRO 4900.0119
PHE 4910.0102
VAL 4920.0122
ASP 4930.0069
ARG 4940.0058
GLN 4950.0062
THR 4960.0046
ALA 4970.0170
GLN 4980.0109
ALA 4990.0191
ALA 5000.0145
GLY 5010.0117
THR 5020.0106
ASP 5030.0087
THR 5040.0023
THR 5050.0010
ILE 5060.0025
THR 5070.0035
VAL 5080.0046
ASN 5090.0019
VAL 5100.0020
LEU 5110.0036
ALA 5120.0021
TRP 5130.0016
LEU 5140.0019
TYR 5150.0014
ALA 5160.0018
ALA 5170.0050
VAL 5180.0057
ILE 5190.0086
ASN 5200.0097
GLY 5210.0095
ASP 5220.0061
ARG 5230.0058
TRP 5240.0048
PHE 5250.0030
LEU 5260.0027
ASN 5270.0030
ARG 5280.0035
PHE 5290.0091
THR 5300.0112
THR 5310.0117
THR 5320.0171
LEU 5330.0095
ASN 5340.0090
ASP 5350.0070
PHE 5360.0030
ASN 5370.0046
LEU 5380.0027
VAL 5390.0020
ALA 5400.0045
MET 5410.0042
LYS 5420.0042
TYR 5430.0045
ASN 5440.0029
TYR 5450.0030
GLU 5460.0030
PRO 5470.0035
LEU 5480.0046
THR 5490.0028
GLN 5500.0047
ASP 5510.0061
HIE 5520.0046
VAL 5530.0038
ASP 5540.0059
ILE 5550.0049
LEU 5560.0026
GLY 5570.0076
PRO 5580.0089
LEU 5590.0066
SER 5600.0059
ALA 5610.0191
GLN 5620.0186
THR 5630.0104
GLY 5640.0089
ILE 5650.0025
ALA 5660.0032
VAL 5670.0041
LEU 5680.0036
ASP 5690.0037
MET 5700.0040
CYS 5710.0041
ALA 5720.0028
SER 5730.0041
LEU 5740.0050
LYS 5750.0015
GLU 5760.0044
LEU 5770.0057
LEU 5780.0048
GLN 5790.0047
ASN 5800.0066
GLY 5810.0093
MET 5820.0064
ASN 5830.0089
GLY 5840.0087
ARG 5850.0045
THR 5860.0042
ILE 5870.0031
LEU 5880.0058
GLY 5890.0133
SER 5900.0111
ALA 5910.0086
LEU 5920.0101
LEU 5930.0043
GLU 5940.0014
ASP 5950.0023
GLU 5960.0037
PHE 5970.0040
THR 5980.0049
PRO 5990.0045
PHE 6000.0047
ASP 6010.0032
VAL 6020.0025
VAL 6030.0017
ARG 6040.0005
GLN 6050.0059
CYS 6060.0054
SER 6070.0080
GLY 6080.0097
VAL 6090.0057
THR 6100.0059
PHE 6110.0058
GLN 6120.0068

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.