CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  apo-dimer-test  ***

<R2> analysis for 2601021904551024081

---  normal mode 22  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0237
SER 10.0026
GLY 20.0027
PHE 30.0043
ARG 40.0040
LYS 50.0012
MET 60.0011
ALA 70.0011
PHE 80.0014
PRO 90.0052
SER 100.0051
GLY 110.0050
LYS 120.0054
VAL 130.0079
GLU 140.0080
GLY 150.0080
CYS 160.0079
MET 170.0098
VAL 180.0098
GLN 190.0096
VAL 200.0089
THR 210.0085
CYS 220.0071
GLY 230.0059
THR 240.0060
THR 250.0067
THR 260.0069
LEU 270.0071
ASN 280.0075
GLY 290.0092
LEU 300.0100
TRP 310.0115
LEU 320.0114
ASP 330.0147
ASP 340.0144
VAL 350.0126
VAL 360.0118
TYR 370.0096
CYS 380.0086
PRO 390.0080
ARG 400.0076
HID 410.0064
VAL 420.0066
ILE 430.0057
CYS 440.0041
THR 450.0057
SER 460.0101
GLU 470.0106
ASP 480.0058
MET 490.0044
LEU 500.0050
ASN 510.0041
PRO 520.0057
ASN 530.0083
TYR 540.0086
GLU 550.0127
ASP 560.0127
LEU 570.0096
LEU 580.0108
ILE 590.0143
ARG 600.0122
LYS 610.0099
SER 620.0120
ASN 630.0133
HIE 640.0120
ASN 650.0094
PHE 660.0101
LEU 670.0106
VAL 680.0121
GLN 690.0132
ALA 700.0141
GLY 710.0156
ASN 720.0167
VAL 730.0184
GLN 740.0168
LEU 750.0163
ARG 760.0161
VAL 770.0149
ILE 780.0162
GLY 790.0155
HID 800.0138
SER 810.0125
MET 820.0103
GLN 830.0104
ASN 840.0083
CYS 850.0073
VAL 860.0091
LEU 870.0096
LYS 880.0118
LEU 890.0124
LYS 900.0145
VAL 910.0158
ASP 920.0180
THR 930.0170
ALA 940.0157
ASN 950.0157
PRO 960.0175
LYS 970.0138
THR 980.0108
PRO 990.0100
LYS 1000.0076
TYR 1010.0092
LYS 1020.0085
PHE 1030.0081
VAL 1040.0080
ARG 1050.0079
ILE 1060.0069
GLN 1070.0077
PRO 1080.0074
GLY 1090.0018
GLN 1100.0015
THR 1110.0004
PHE 1120.0010
SER 1130.0038
VAL 1140.0039
LEU 1150.0041
ALA 1160.0042
CYS 1170.0057
TYR 1180.0054
ASN 1190.0053
GLY 1200.0056
SER 1210.0035
PRO 1220.0036
SER 1230.0036
GLY 1240.0036
VAL 1250.0019
TYR 1260.0017
GLN 1270.0012
CYS 1280.0012
ALA 1290.0023
MET 1300.0038
ARG 1310.0051
PRO 1320.0063
ASN 1330.0098
PHE 1340.0088
THR 1350.0081
ILE 1360.0065
LYS 1370.0043
GLY 1380.0035
SER 1390.0032
PHE 1400.0034
LEU 1410.0046
ASN 1420.0038
GLY 1430.0036
SER 1440.0044
CYS 1450.0064
GLY 1460.0067
SER 1470.0067
VAL 1480.0073
GLY 1490.0053
PHE 1500.0050
ASN 1510.0048
ILE 1520.0048
ASP 1530.0064
TYR 1540.0064
ASP 1550.0064
CYS 1560.0064
VAL 1570.0077
SER 1580.0074
PHE 1590.0072
CYS 1600.0070
TYR 1610.0079
MET 1620.0073
HIE 1630.0070
HIE 1640.0068
MET 1650.0076
GLU 1660.0080
LEU 1670.0105
PRO 1680.0117
THR 1690.0120
GLY 1700.0094
VAL 1710.0089
HIE 1720.0076
ALA 1730.0089
GLY 1740.0086
THR 1750.0091
ASP 1760.0097
LEU 1770.0095
GLU 1780.0098
GLY 1790.0085
ASN 1800.0095
PHE 1810.0103
TYR 1820.0103
GLY 1830.0122
PRO 1840.0137
PHE 1850.0120
VAL 1860.0103
ASP 1870.0083
ARG 1880.0076
GLN 1890.0078
THR 1900.0102
ALA 1910.0136
GLN 1920.0152
ALA 1930.0183
ALA 1940.0143
GLY 1950.0139
THR 1960.0110
ASP 1970.0063
THR 1980.0059
THR 1990.0063
ILE 2000.0070
THR 2010.0101
VAL 2020.0098
ASN 2030.0099
VAL 2040.0097
LEU 2050.0091
ALA 2060.0092
TRP 2070.0098
LEU 2080.0085
TYR 2090.0070
ALA 2100.0080
ALA 2110.0077
VAL 2120.0058
ILE 2130.0054
ASN 2140.0066
GLY 2150.0056
ASP 2160.0072
ARG 2170.0076
TRP 2180.0104
PHE 2190.0110
LEU 2200.0088
ASN 2210.0132
ARG 2220.0156
PHE 2230.0142
THR 2240.0104
THR 2250.0113
THR 2260.0110
LEU 2270.0120
ASN 2280.0149
ASP 2290.0141
PHE 2300.0134
ASN 2310.0156
LEU 2320.0176
VAL 2330.0150
ALA 2340.0149
MET 2350.0170
LYS 2360.0179
TYR 2370.0131
ASN 2380.0131
TYR 2390.0115
GLU 2400.0106
PRO 2410.0157
LEU 2420.0135
THR 2430.0138
GLN 2440.0122
ASP 2450.0133
HIE 2460.0124
VAL 2470.0102
ASP 2480.0109
ILE 2490.0113
LEU 2500.0092
GLY 2510.0081
PRO 2520.0086
LEU 2530.0070
SER 2540.0057
ALA 2550.0060
GLN 2560.0059
THR 2570.0044
GLY 2580.0036
ILE 2590.0040
ALA 2600.0041
VAL 2610.0064
LEU 2620.0072
ASP 2630.0069
MET 2640.0079
CYS 2650.0096
ALA 2660.0102
SER 2670.0103
LEU 2680.0117
LYS 2690.0138
GLU 2700.0144
LEU 2710.0146
LEU 2720.0164
GLN 2730.0189
ASN 2740.0200
GLY 2750.0198
MET 2760.0179
ASN 2770.0232
GLY 2780.0237
ARG 2790.0188
THR 2800.0174
ILE 2810.0117
LEU 2820.0119
GLY 2830.0148
SER 2840.0161
ALA 2850.0163
LEU 2860.0153
LEU 2870.0129
GLU 2880.0133
ASP 2890.0071
GLU 2900.0069
PHE 2910.0073
THR 2920.0073
PRO 2930.0070
PHE 2940.0069
ASP 2950.0069
VAL 2960.0070
VAL 2970.0058
ARG 2980.0047
GLN 2990.0044
CYS 3000.0054
SER 3010.0055
GLY 3020.0035
VAL 3030.0030
THR 3040.0013
PHE 3050.0040
GLN 3060.0041
SER 3070.0032
GLY 3080.0032
PHE 3090.0036
ARG 3100.0030
LYS 3110.0031
MET 3120.0033
ALA 3130.0027
PHE 3140.0025
PRO 3150.0026
SER 3160.0028
GLY 3170.0056
LYS 3180.0061
VAL 3190.0066
GLU 3200.0064
GLY 3210.0101
CYS 3220.0092
MET 3230.0090
VAL 3240.0088
GLN 3250.0092
VAL 3260.0086
THR 3270.0078
CYS 3280.0072
GLY 3290.0058
THR 3300.0053
THR 3310.0060
THR 3320.0070
LEU 3330.0066
ASN 3340.0073
GLY 3350.0076
LEU 3360.0082
TRP 3370.0107
LEU 3380.0110
ASP 3390.0122
ASP 3400.0120
VAL 3410.0113
VAL 3420.0105
TYR 3430.0089
CYS 3440.0078
PRO 3450.0077
ARG 3460.0071
HID 3470.0062
VAL 3480.0064
ILE 3490.0065
CYS 3500.0048
THR 3510.0035
SER 3520.0037
GLU 3530.0029
ASP 3540.0034
MET 3550.0041
LEU 3560.0035
ASN 3570.0037
PRO 3580.0047
ASN 3590.0063
TYR 3600.0073
GLU 3610.0094
ASP 3620.0088
LEU 3630.0074
LEU 3640.0090
ILE 3650.0119
ARG 3660.0102
LYS 3670.0101
SER 3680.0122
ASN 3690.0126
HIE 3700.0121
ASN 3710.0100
PHE 3720.0108
LEU 3730.0103
VAL 3740.0111
GLN 3750.0120
ALA 3760.0130
GLY 3770.0146
ASN 3780.0150
VAL 3790.0153
GLN 3800.0140
LEU 3810.0147
ARG 3820.0147
VAL 3830.0137
ILE 3840.0144
GLY 3850.0136
HID 3860.0118
SER 3870.0108
MET 3880.0092
GLN 3890.0072
ASN 3900.0063
CYS 3910.0063
VAL 3920.0073
LEU 3930.0088
LYS 3940.0103
LEU 3950.0114
LYS 3960.0129
VAL 3970.0138
ASP 3980.0153
THR 3990.0159
ALA 4000.0154
ASN 4010.0130
PRO 4020.0150
LYS 4030.0144
THR 4040.0125
PRO 4050.0088
LYS 4060.0082
TYR 4070.0079
LYS 4080.0074
PHE 4090.0059
VAL 4100.0061
ARG 4110.0059
ILE 4120.0060
GLN 4130.0025
PRO 4140.0030
GLY 4150.0036
GLN 4160.0016
THR 4170.0010
PHE 4180.0007
SER 4190.0013
VAL 4200.0032
LEU 4210.0049
ALA 4220.0045
CYS 4230.0042
TYR 4240.0037
ASN 4250.0064
GLY 4260.0062
SER 4270.0053
PRO 4280.0052
SER 4290.0029
GLY 4300.0027
VAL 4310.0025
TYR 4320.0024
GLN 4330.0021
CYS 4340.0019
ALA 4350.0019
MET 4360.0024
ARG 4370.0048
PRO 4380.0049
ASN 4390.0051
PHE 4400.0045
THR 4410.0047
ILE 4420.0040
LYS 4430.0038
GLY 4440.0032
SER 4450.0030
PHE 4460.0030
LEU 4470.0027
ASN 4480.0033
GLY 4490.0041
SER 4500.0050
CYS 4510.0056
GLY 4520.0063
SER 4530.0059
VAL 4540.0056
GLY 4550.0053
PHE 4560.0049
ASN 4570.0041
ILE 4580.0041
ASP 4590.0041
TYR 4600.0042
ASP 4610.0064
CYS 4620.0065
VAL 4630.0066
SER 4640.0067
PHE 4650.0068
CYS 4660.0065
TYR 4670.0060
MET 4680.0056
HIE 4690.0061
HIE 4700.0057
MET 4710.0055
GLU 4720.0055
LEU 4730.0069
PRO 4740.0074
THR 4750.0075
GLY 4760.0061
VAL 4770.0057
HIE 4780.0053
ALA 4790.0060
GLY 4800.0059
THR 4810.0066
ASP 4820.0073
LEU 4830.0073
GLU 4840.0072
GLY 4850.0064
ASN 4860.0068
PHE 4870.0065
TYR 4880.0067
GLY 4890.0082
PRO 4900.0090
PHE 4910.0077
VAL 4920.0075
ASP 4930.0071
ARG 4940.0063
GLN 4950.0057
THR 4960.0069
ALA 4970.0092
GLN 4980.0091
ALA 4990.0099
ALA 5000.0088
GLY 5010.0076
THR 5020.0046
ASP 5030.0060
THR 5040.0081
THR 5050.0114
ILE 5060.0119
THR 5070.0123
VAL 5080.0128
ASN 5090.0115
VAL 5100.0115
LEU 5110.0110
ALA 5120.0109
TRP 5130.0105
LEU 5140.0097
TYR 5150.0087
ALA 5160.0092
ALA 5170.0080
VAL 5180.0066
ILE 5190.0063
ASN 5200.0070
GLY 5210.0075
ASP 5220.0096
ARG 5230.0092
TRP 5240.0117
PHE 5250.0126
LEU 5260.0104
ASN 5270.0128
ARG 5280.0142
PHE 5290.0143
THR 5300.0134
THR 5310.0156
THR 5320.0163
LEU 5330.0171
ASN 5340.0200
ASP 5350.0191
PHE 5360.0177
ASN 5370.0193
LEU 5380.0205
VAL 5390.0190
ALA 5400.0193
MET 5410.0204
LYS 5420.0196
TYR 5430.0182
ASN 5440.0198
TYR 5450.0155
GLU 5460.0165
PRO 5470.0171
LEU 5480.0167
THR 5490.0187
GLN 5500.0174
ASP 5510.0183
HIE 5520.0166
VAL 5530.0135
ASP 5540.0140
ILE 5550.0148
LEU 5560.0122
GLY 5570.0107
PRO 5580.0106
LEU 5590.0090
SER 5600.0081
ALA 5610.0082
GLN 5620.0080
THR 5630.0068
GLY 5640.0065
ILE 5650.0068
ALA 5660.0080
VAL 5670.0108
LEU 5680.0118
ASP 5690.0099
MET 5700.0108
CYS 5710.0134
ALA 5720.0136
SER 5730.0120
LEU 5740.0141
LYS 5750.0159
GLU 5760.0158
LEU 5770.0154
LEU 5780.0173
GLN 5790.0186
ASN 5800.0189
GLY 5810.0191
MET 5820.0175
ASN 5830.0207
GLY 5840.0216
ARG 5850.0168
THR 5860.0153
ILE 5870.0126
LEU 5880.0124
GLY 5890.0152
SER 5900.0159
ALA 5910.0165
LEU 5920.0162
LEU 5930.0112
GLU 5940.0109
ASP 5950.0100
GLU 5960.0101
PHE 5970.0086
THR 5980.0085
PRO 5990.0085
PHE 6000.0084
ASP 6010.0057
VAL 6020.0062
VAL 6030.0063
ARG 6040.0060
GLN 6050.0044
CYS 6060.0036
SER 6070.0037
GLY 6080.0045
VAL 6090.0030
THR 6100.0015
PHE 6110.0019
GLN 6120.0028

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.