CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  apo-dimer-test  ***

<R2> analysis for 2601021904551024081

---  normal mode 40  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0491
SER 10.0139
GLY 20.0128
PHE 30.0113
ARG 40.0100
LYS 50.0076
MET 60.0062
ALA 70.0051
PHE 80.0031
PRO 90.0005
SER 100.0018
GLY 110.0028
LYS 120.0025
VAL 130.0024
GLU 140.0031
GLY 150.0027
CYS 160.0024
MET 170.0029
VAL 180.0027
GLN 190.0032
VAL 200.0039
THR 210.0048
CYS 220.0050
GLY 230.0062
THR 240.0069
THR 250.0067
THR 260.0044
LEU 270.0032
ASN 280.0016
GLY 290.0029
LEU 300.0034
TRP 310.0055
LEU 320.0054
ASP 330.0102
ASP 340.0095
VAL 350.0084
VAL 360.0068
TYR 370.0030
CYS 380.0030
PRO 390.0030
ARG 400.0032
HID 410.0062
VAL 420.0058
ILE 430.0054
CYS 440.0054
THR 450.0135
SER 460.0226
GLU 470.0196
ASP 480.0086
MET 490.0107
LEU 500.0103
ASN 510.0083
PRO 520.0079
ASN 530.0063
TYR 540.0063
GLU 550.0065
ASP 560.0056
LEU 570.0041
LEU 580.0048
ILE 590.0045
ARG 600.0036
LYS 610.0061
SER 620.0092
ASN 630.0110
HIE 640.0102
ASN 650.0058
PHE 660.0056
LEU 670.0044
VAL 680.0048
GLN 690.0024
ALA 700.0066
GLY 710.0098
ASN 720.0093
VAL 730.0033
GLN 740.0030
LEU 750.0076
ARG 760.0121
VAL 770.0107
ILE 780.0136
GLY 790.0118
HID 800.0086
SER 810.0041
MET 820.0039
GLN 830.0049
ASN 840.0053
CYS 850.0043
VAL 860.0035
LEU 870.0028
LYS 880.0030
LEU 890.0083
LYS 900.0116
VAL 910.0115
ASP 920.0142
THR 930.0116
ALA 940.0128
ASN 950.0117
PRO 960.0132
LYS 970.0104
THR 980.0069
PRO 990.0052
LYS 1000.0029
TYR 1010.0034
LYS 1020.0067
PHE 1030.0081
VAL 1040.0115
ARG 1050.0155
ILE 1060.0165
GLN 1070.0179
PRO 1080.0174
GLY 1090.0161
GLN 1100.0139
THR 1110.0120
PHE 1120.0098
SER 1130.0059
VAL 1140.0050
LEU 1150.0037
ALA 1160.0038
CYS 1170.0060
TYR 1180.0059
ASN 1190.0050
GLY 1200.0045
SER 1210.0084
PRO 1220.0073
SER 1230.0083
GLY 1240.0068
VAL 1250.0024
TYR 1260.0044
GLN 1270.0066
CYS 1280.0088
ALA 1290.0149
MET 1300.0146
ARG 1310.0144
PRO 1320.0145
ASN 1330.0120
PHE 1340.0115
THR 1350.0100
ILE 1360.0110
LYS 1370.0093
GLY 1380.0073
SER 1390.0052
PHE 1400.0032
LEU 1410.0072
ASN 1420.0075
GLY 1430.0061
SER 1440.0045
CYS 1450.0021
GLY 1460.0004
SER 1470.0020
VAL 1480.0024
GLY 1490.0066
PHE 1500.0059
ASN 1510.0058
ILE 1520.0041
ASP 1530.0038
TYR 1540.0037
ASP 1550.0043
CYS 1560.0046
VAL 1570.0045
SER 1580.0068
PHE 1590.0063
CYS 1600.0090
TYR 1610.0069
MET 1620.0047
HIE 1630.0033
HIE 1640.0014
MET 1650.0023
GLU 1660.0033
LEU 1670.0035
PRO 1680.0073
THR 1690.0096
GLY 1700.0092
VAL 1710.0085
HIE 1720.0064
ALA 1730.0052
GLY 1740.0055
THR 1750.0067
ASP 1760.0082
LEU 1770.0058
GLU 1780.0069
GLY 1790.0054
ASN 1800.0073
PHE 1810.0089
TYR 1820.0102
GLY 1830.0092
PRO 1840.0071
PHE 1850.0046
VAL 1860.0062
ASP 1870.0073
ARG 1880.0079
GLN 1890.0087
THR 1900.0077
ALA 1910.0065
GLN 1920.0047
ALA 1930.0046
ALA 1940.0047
GLY 1950.0182
THR 1960.0306
ASP 1970.0084
THR 1980.0077
THR 1990.0103
ILE 2000.0122
THR 2010.0064
VAL 2020.0062
ASN 2030.0078
VAL 2040.0068
LEU 2050.0026
ALA 2060.0041
TRP 2070.0062
LEU 2080.0047
TYR 2090.0061
ALA 2100.0094
ALA 2110.0100
VAL 2120.0094
ILE 2130.0129
ASN 2140.0148
GLY 2150.0133
ASP 2160.0110
ARG 2170.0028
TRP 2180.0010
PHE 2190.0023
LEU 2200.0025
ASN 2210.0241
ARG 2220.0263
PHE 2230.0182
THR 2240.0157
THR 2250.0013
THR 2260.0061
LEU 2270.0062
ASN 2280.0105
ASP 2290.0102
PHE 2300.0048
ASN 2310.0083
LEU 2320.0136
VAL 2330.0106
ALA 2340.0060
MET 2350.0143
LYS 2360.0198
TYR 2370.0129
ASN 2380.0094
TYR 2390.0030
GLU 2400.0044
PRO 2410.0054
LEU 2420.0057
THR 2430.0103
GLN 2440.0125
ASP 2450.0140
HIE 2460.0096
VAL 2470.0074
ASP 2480.0104
ILE 2490.0063
LEU 2500.0022
GLY 2510.0071
PRO 2520.0070
LEU 2530.0084
SER 2540.0095
ALA 2550.0153
GLN 2560.0160
THR 2570.0127
GLY 2580.0138
ILE 2590.0094
ALA 2600.0102
VAL 2610.0031
LEU 2620.0040
ASP 2630.0043
MET 2640.0030
CYS 2650.0043
ALA 2660.0048
SER 2670.0050
LEU 2680.0046
LYS 2690.0044
GLU 2700.0059
LEU 2710.0065
LEU 2720.0059
GLN 2730.0087
ASN 2740.0103
GLY 2750.0073
MET 2760.0042
ASN 2770.0077
GLY 2780.0063
ARG 2790.0033
THR 2800.0061
ILE 2810.0076
LEU 2820.0103
GLY 2830.0118
SER 2840.0108
ALA 2850.0067
LEU 2860.0067
LEU 2870.0054
GLU 2880.0080
ASP 2890.0104
GLU 2900.0105
PHE 2910.0079
THR 2920.0063
PRO 2930.0031
PHE 2940.0022
ASP 2950.0063
VAL 2960.0076
VAL 2970.0075
ARG 2980.0071
GLN 2990.0103
CYS 3000.0121
SER 3010.0120
GLY 3020.0102
VAL 3030.0061
THR 3040.0039
PHE 3050.0030
GLN 3060.0032
SER 3070.0028
GLY 3080.0027
PHE 3090.0044
ARG 3100.0044
LYS 3110.0039
MET 3120.0042
ALA 3130.0080
PHE 3140.0076
PRO 3150.0064
SER 3160.0042
GLY 3170.0064
LYS 3180.0079
VAL 3190.0046
GLU 3200.0021
GLY 3210.0053
CYS 3220.0048
MET 3230.0041
VAL 3240.0046
GLN 3250.0090
VAL 3260.0094
THR 3270.0100
CYS 3280.0110
GLY 3290.0147
THR 3300.0155
THR 3310.0143
THR 3320.0136
LEU 3330.0116
ASN 3340.0088
GLY 3350.0067
LEU 3360.0039
TRP 3370.0055
LEU 3380.0053
ASP 3390.0062
ASP 3400.0068
VAL 3410.0046
VAL 3420.0046
TYR 3430.0072
CYS 3440.0098
PRO 3450.0121
ARG 3460.0116
HID 3470.0107
VAL 3480.0116
ILE 3490.0126
CYS 3500.0104
THR 3510.0120
SER 3520.0116
GLU 3530.0185
ASP 3540.0179
MET 3550.0102
LEU 3560.0197
ASN 3570.0203
PRO 3580.0132
ASN 3590.0135
TYR 3600.0125
GLU 3610.0165
ASP 3620.0167
LEU 3630.0136
LEU 3640.0169
ILE 3650.0229
ARG 3660.0182
LYS 3670.0155
SER 3680.0195
ASN 3690.0104
HIE 3700.0089
ASN 3710.0096
PHE 3720.0095
LEU 3730.0056
VAL 3740.0025
GLN 3750.0047
ALA 3760.0091
GLY 3770.0216
ASN 3780.0220
VAL 3790.0195
GLN 3800.0142
LEU 3810.0096
ARG 3820.0123
VAL 3830.0108
ILE 3840.0154
GLY 3850.0123
HID 3860.0120
SER 3870.0138
MET 3880.0147
GLN 3890.0096
ASN 3900.0096
CYS 3910.0095
VAL 3920.0095
LEU 3930.0131
LYS 3940.0104
LEU 3950.0082
LYS 3960.0079
VAL 3970.0084
ASP 3980.0142
THR 3990.0129
ALA 4000.0097
ASN 4010.0127
PRO 4020.0159
LYS 4030.0151
THR 4040.0124
PRO 4050.0151
LYS 4060.0191
TYR 4070.0141
LYS 4080.0126
PHE 4090.0033
VAL 4100.0042
ARG 4110.0041
ILE 4120.0063
GLN 4130.0092
PRO 4140.0067
GLY 4150.0073
GLN 4160.0094
THR 4170.0086
PHE 4180.0078
SER 4190.0078
VAL 4200.0063
LEU 4210.0059
ALA 4220.0072
CYS 4230.0063
TYR 4240.0086
ASN 4250.0070
GLY 4260.0049
SER 4270.0051
PRO 4280.0051
SER 4290.0052
GLY 4300.0056
VAL 4310.0057
TYR 4320.0071
GLN 4330.0084
CYS 4340.0071
ALA 4350.0065
MET 4360.0059
ARG 4370.0062
PRO 4380.0080
ASN 4390.0069
PHE 4400.0078
THR 4410.0064
ILE 4420.0073
LYS 4430.0071
GLY 4440.0082
SER 4450.0130
PHE 4460.0124
LEU 4470.0138
ASN 4480.0140
GLY 4490.0135
SER 4500.0118
CYS 4510.0097
GLY 4520.0082
SER 4530.0060
VAL 4540.0032
GLY 4550.0048
PHE 4560.0058
ASN 4570.0104
ILE 4580.0132
ASP 4590.0186
TYR 4600.0212
ASP 4610.0220
CYS 4620.0187
VAL 4630.0121
SER 4640.0108
PHE 4650.0028
CYS 4660.0034
TYR 4670.0038
MET 4680.0050
HIE 4690.0097
HIE 4700.0064
MET 4710.0062
GLU 4720.0092
LEU 4730.0175
PRO 4740.0248
THR 4750.0274
GLY 4760.0249
VAL 4770.0128
HIE 4780.0100
ALA 4790.0070
GLY 4800.0063
THR 4810.0061
ASP 4820.0050
LEU 4830.0046
GLU 4840.0052
GLY 4850.0047
ASN 4860.0037
PHE 4870.0044
TYR 4880.0056
GLY 4890.0082
PRO 4900.0093
PHE 4910.0076
VAL 4920.0061
ASP 4930.0039
ARG 4940.0097
GLN 4950.0159
THR 4960.0271
ALA 4970.0343
GLN 4980.0248
ALA 4990.0255
ALA 5000.0174
GLY 5010.0491
THR 5020.0449
ASP 5030.0197
THR 5040.0100
THR 5050.0024
ILE 5060.0032
THR 5070.0020
VAL 5080.0028
ASN 5090.0029
VAL 5100.0024
LEU 5110.0008
ALA 5120.0013
TRP 5130.0027
LEU 5140.0030
TYR 5150.0032
ALA 5160.0039
ALA 5170.0067
VAL 5180.0072
ILE 5190.0078
ASN 5200.0090
GLY 5210.0098
ASP 5220.0068
ARG 5230.0044
TRP 5240.0022
PHE 5250.0027
LEU 5260.0024
ASN 5270.0046
ARG 5280.0076
PHE 5290.0057
THR 5300.0057
THR 5310.0049
THR 5320.0064
LEU 5330.0042
ASN 5340.0063
ASP 5350.0078
PHE 5360.0051
ASN 5370.0061
LEU 5380.0079
VAL 5390.0048
ALA 5400.0030
MET 5410.0097
LYS 5420.0062
TYR 5430.0079
ASN 5440.0123
TYR 5450.0017
GLU 5460.0021
PRO 5470.0022
LEU 5480.0022
THR 5490.0079
GLN 5500.0114
ASP 5510.0127
HIE 5520.0075
VAL 5530.0076
ASP 5540.0121
ILE 5550.0100
LEU 5560.0058
GLY 5570.0105
PRO 5580.0091
LEU 5590.0058
SER 5600.0093
ALA 5610.0142
GLN 5620.0124
THR 5630.0125
GLY 5640.0158
ILE 5650.0056
ALA 5660.0046
VAL 5670.0026
LEU 5680.0022
ASP 5690.0016
MET 5700.0019
CYS 5710.0018
ALA 5720.0025
SER 5730.0028
LEU 5740.0021
LYS 5750.0029
GLU 5760.0040
LEU 5770.0040
LEU 5780.0042
GLN 5790.0065
ASN 5800.0083
GLY 5810.0074
MET 5820.0066
ASN 5830.0097
GLY 5840.0105
ARG 5850.0055
THR 5860.0047
ILE 5870.0040
LEU 5880.0055
GLY 5890.0039
SER 5900.0036
ALA 5910.0038
LEU 5920.0031
LEU 5930.0028
GLU 5940.0029
ASP 5950.0032
GLU 5960.0042
PHE 5970.0053
THR 5980.0052
PRO 5990.0044
PHE 6000.0056
ASP 6010.0067
VAL 6020.0056
VAL 6030.0047
ARG 6040.0073
GLN 6050.0076
CYS 6060.0080
SER 6070.0093
GLY 6080.0105
VAL 6090.0143
THR 6100.0132
PHE 6110.0131
GLN 6120.0122

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.