CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  apo-dimer-test  ***

<R2> analysis for 2601021904551024081

---  normal mode 55  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0507
SER 10.0057
GLY 20.0044
PHE 30.0060
ARG 40.0081
LYS 50.0098
MET 60.0099
ALA 70.0101
PHE 80.0103
PRO 90.0101
SER 100.0075
GLY 110.0076
LYS 120.0061
VAL 130.0023
GLU 140.0023
GLY 150.0030
CYS 160.0013
MET 170.0058
VAL 180.0062
GLN 190.0061
VAL 200.0059
THR 210.0103
CYS 220.0122
GLY 230.0138
THR 240.0124
THR 250.0081
THR 260.0082
LEU 270.0067
ASN 280.0066
GLY 290.0035
LEU 300.0053
TRP 310.0059
LEU 320.0084
ASP 330.0159
ASP 340.0134
VAL 350.0104
VAL 360.0074
TYR 370.0059
CYS 380.0054
PRO 390.0056
ARG 400.0035
HID 410.0079
VAL 420.0098
ILE 430.0096
CYS 440.0106
THR 450.0159
SER 460.0507
GLU 470.0469
ASP 480.0187
MET 490.0060
LEU 500.0044
ASN 510.0089
PRO 520.0144
ASN 530.0246
TYR 540.0118
GLU 550.0187
ASP 560.0272
LEU 570.0158
LEU 580.0041
ILE 590.0122
ARG 600.0198
LYS 610.0140
SER 620.0207
ASN 630.0229
HIE 640.0297
ASN 650.0175
PHE 660.0118
LEU 670.0100
VAL 680.0049
GLN 690.0095
ALA 700.0150
GLY 710.0290
ASN 720.0285
VAL 730.0007
GLN 740.0108
LEU 750.0119
ARG 760.0244
VAL 770.0076
ILE 780.0080
GLY 790.0091
HID 800.0162
SER 810.0113
MET 820.0079
GLN 830.0097
ASN 840.0076
CYS 850.0035
VAL 860.0053
LEU 870.0067
LYS 880.0091
LEU 890.0088
LYS 900.0100
VAL 910.0123
ASP 920.0214
THR 930.0190
ALA 940.0196
ASN 950.0157
PRO 960.0212
LYS 970.0114
THR 980.0109
PRO 990.0110
LYS 1000.0112
TYR 1010.0093
LYS 1020.0095
PHE 1030.0089
VAL 1040.0098
ARG 1050.0043
ILE 1060.0042
GLN 1070.0060
PRO 1080.0068
GLY 1090.0035
GLN 1100.0020
THR 1110.0036
PHE 1120.0049
SER 1130.0070
VAL 1140.0053
LEU 1150.0041
ALA 1160.0034
CYS 1170.0061
TYR 1180.0079
ASN 1190.0100
GLY 1200.0095
SER 1210.0089
PRO 1220.0063
SER 1230.0058
GLY 1240.0056
VAL 1250.0072
TYR 1260.0075
GLN 1270.0076
CYS 1280.0074
ALA 1290.0023
MET 1300.0040
ARG 1310.0047
PRO 1320.0062
ASN 1330.0083
PHE 1340.0068
THR 1350.0068
ILE 1360.0054
LYS 1370.0034
GLY 1380.0041
SER 1390.0054
PHE 1400.0055
LEU 1410.0059
ASN 1420.0107
GLY 1430.0108
SER 1440.0053
CYS 1450.0028
GLY 1460.0015
SER 1470.0025
VAL 1480.0026
GLY 1490.0065
PHE 1500.0065
ASN 1510.0070
ILE 1520.0067
ASP 1530.0142
TYR 1540.0118
ASP 1550.0066
CYS 1560.0085
VAL 1570.0059
SER 1580.0059
PHE 1590.0053
CYS 1600.0058
TYR 1610.0037
MET 1620.0033
HIE 1630.0032
HIE 1640.0029
MET 1650.0072
GLU 1660.0090
LEU 1670.0094
PRO 1680.0123
THR 1690.0150
GLY 1700.0122
VAL 1710.0087
HIE 1720.0059
ALA 1730.0058
GLY 1740.0050
THR 1750.0043
ASP 1760.0040
LEU 1770.0046
GLU 1780.0056
GLY 1790.0055
ASN 1800.0055
PHE 1810.0048
TYR 1820.0057
GLY 1830.0061
PRO 1840.0058
PHE 1850.0043
VAL 1860.0050
ASP 1870.0076
ARG 1880.0082
GLN 1890.0048
THR 1900.0049
ALA 1910.0048
GLN 1920.0058
ALA 1930.0104
ALA 1940.0103
GLY 1950.0103
THR 1960.0092
ASP 1970.0054
THR 1980.0056
THR 1990.0047
ILE 2000.0038
THR 2010.0038
VAL 2020.0022
ASN 2030.0025
VAL 2040.0042
LEU 2050.0050
ALA 2060.0036
TRP 2070.0038
LEU 2080.0045
TYR 2090.0056
ALA 2100.0051
ALA 2110.0052
VAL 2120.0049
ILE 2130.0046
ASN 2140.0048
GLY 2150.0039
ASP 2160.0035
ARG 2170.0044
TRP 2180.0034
PHE 2190.0025
LEU 2200.0049
ASN 2210.0136
ARG 2220.0181
PHE 2230.0144
THR 2240.0134
THR 2250.0063
THR 2260.0072
LEU 2270.0080
ASN 2280.0122
ASP 2290.0099
PHE 2300.0061
ASN 2310.0102
LEU 2320.0117
VAL 2330.0055
ALA 2340.0080
MET 2350.0135
LYS 2360.0141
TYR 2370.0112
ASN 2380.0117
TYR 2390.0075
GLU 2400.0052
PRO 2410.0075
LEU 2420.0064
THR 2430.0114
GLN 2440.0140
ASP 2450.0107
HIE 2460.0058
VAL 2470.0071
ASP 2480.0083
ILE 2490.0028
LEU 2500.0041
GLY 2510.0059
PRO 2520.0052
LEU 2530.0064
SER 2540.0069
ALA 2550.0069
GLN 2560.0070
THR 2570.0071
GLY 2580.0071
ILE 2590.0071
ALA 2600.0070
VAL 2610.0063
LEU 2620.0053
ASP 2630.0059
MET 2640.0063
CYS 2650.0052
ALA 2660.0049
SER 2670.0057
LEU 2680.0058
LYS 2690.0049
GLU 2700.0038
LEU 2710.0041
LEU 2720.0048
GLN 2730.0069
ASN 2740.0040
GLY 2750.0056
MET 2760.0043
ASN 2770.0222
GLY 2780.0177
ARG 2790.0101
THR 2800.0013
ILE 2810.0025
LEU 2820.0031
GLY 2830.0027
SER 2840.0026
ALA 2850.0004
LEU 2860.0020
LEU 2870.0033
GLU 2880.0028
ASP 2890.0049
GLU 2900.0052
PHE 2910.0046
THR 2920.0047
PRO 2930.0070
PHE 2940.0091
ASP 2950.0092
VAL 2960.0063
VAL 2970.0122
ARG 2980.0130
GLN 2990.0117
CYS 3000.0110
SER 3010.0182
GLY 3020.0162
VAL 3030.0159
THR 3040.0145
PHE 3050.0115
GLN 3060.0101
SER 3070.0080
GLY 3080.0087
PHE 3090.0056
ARG 3100.0057
LYS 3110.0057
MET 3120.0051
ALA 3130.0091
PHE 3140.0067
PRO 3150.0068
SER 3160.0086
GLY 3170.0103
LYS 3180.0102
VAL 3190.0121
GLU 3200.0151
GLY 3210.0131
CYS 3220.0118
MET 3230.0105
VAL 3240.0082
GLN 3250.0018
VAL 3260.0018
THR 3270.0031
CYS 3280.0040
GLY 3290.0039
THR 3300.0036
THR 3310.0049
THR 3320.0056
LEU 3330.0062
ASN 3340.0052
GLY 3350.0051
LEU 3360.0052
TRP 3370.0076
LEU 3380.0077
ASP 3390.0071
ASP 3400.0053
VAL 3410.0038
VAL 3420.0030
TYR 3430.0032
CYS 3440.0030
PRO 3450.0058
ARG 3460.0059
HID 3470.0048
VAL 3480.0039
ILE 3490.0042
CYS 3500.0065
THR 3510.0087
SER 3520.0115
GLU 3530.0090
ASP 3540.0093
MET 3550.0103
LEU 3560.0130
ASN 3570.0134
PRO 3580.0109
ASN 3590.0132
TYR 3600.0094
GLU 3610.0039
ASP 3620.0084
LEU 3630.0077
LEU 3640.0038
ILE 3650.0150
ARG 3660.0155
LYS 3670.0101
SER 3680.0153
ASN 3690.0087
HIE 3700.0087
ASN 3710.0045
PHE 3720.0051
LEU 3730.0052
VAL 3740.0037
GLN 3750.0055
ALA 3760.0078
GLY 3770.0183
ASN 3780.0211
VAL 3790.0183
GLN 3800.0124
LEU 3810.0103
ARG 3820.0124
VAL 3830.0090
ILE 3840.0111
GLY 3850.0084
HID 3860.0064
SER 3870.0053
MET 3880.0040
GLN 3890.0041
ASN 3900.0040
CYS 3910.0041
VAL 3920.0043
LEU 3930.0030
LYS 3940.0033
LEU 3950.0042
LYS 3960.0050
VAL 3970.0088
ASP 3980.0142
THR 3990.0089
ALA 4000.0113
ASN 4010.0159
PRO 4020.0239
LYS 4030.0233
THR 4040.0156
PRO 4050.0132
LYS 4060.0146
TYR 4070.0111
LYS 4080.0130
PHE 4090.0073
VAL 4100.0090
ARG 4110.0092
ILE 4120.0109
GLN 4130.0095
PRO 4140.0082
GLY 4150.0096
GLN 4160.0107
THR 4170.0086
PHE 4180.0064
SER 4190.0071
VAL 4200.0069
LEU 4210.0103
ALA 4220.0106
CYS 4230.0111
TYR 4240.0126
ASN 4250.0087
GLY 4260.0098
SER 4270.0109
PRO 4280.0120
SER 4290.0143
GLY 4300.0126
VAL 4310.0103
TYR 4320.0095
GLN 4330.0074
CYS 4340.0068
ALA 4350.0068
MET 4360.0060
ARG 4370.0055
PRO 4380.0060
ASN 4390.0064
PHE 4400.0058
THR 4410.0044
ILE 4420.0019
LYS 4430.0024
GLY 4440.0041
SER 4450.0073
PHE 4460.0088
LEU 4470.0131
ASN 4480.0170
GLY 4490.0097
SER 4500.0071
CYS 4510.0066
GLY 4520.0057
SER 4530.0058
VAL 4540.0045
GLY 4550.0054
PHE 4560.0065
ASN 4570.0093
ILE 4580.0100
ASP 4590.0144
TYR 4600.0161
ASP 4610.0148
CYS 4620.0142
VAL 4630.0093
SER 4640.0099
PHE 4650.0039
CYS 4660.0047
TYR 4670.0032
MET 4680.0016
HIE 4690.0071
HIE 4700.0081
MET 4710.0085
GLU 4720.0090
LEU 4730.0170
PRO 4740.0247
THR 4750.0201
GLY 4760.0149
VAL 4770.0057
HIE 4780.0055
ALA 4790.0056
GLY 4800.0060
THR 4810.0038
ASP 4820.0041
LEU 4830.0029
GLU 4840.0040
GLY 4850.0061
ASN 4860.0056
PHE 4870.0056
TYR 4880.0058
GLY 4890.0045
PRO 4900.0070
PHE 4910.0098
VAL 4920.0129
ASP 4930.0135
ARG 4940.0130
GLN 4950.0117
THR 4960.0132
ALA 4970.0211
GLN 4980.0152
ALA 4990.0138
ALA 5000.0095
GLY 5010.0103
THR 5020.0095
ASP 5030.0072
THR 5040.0063
THR 5050.0026
ILE 5060.0015
THR 5070.0026
VAL 5080.0025
ASN 5090.0013
VAL 5100.0013
LEU 5110.0018
ALA 5120.0007
TRP 5130.0022
LEU 5140.0023
TYR 5150.0018
ALA 5160.0017
ALA 5170.0034
VAL 5180.0031
ILE 5190.0024
ASN 5200.0027
GLY 5210.0047
ASP 5220.0042
ARG 5230.0053
TRP 5240.0051
PHE 5250.0042
LEU 5260.0046
ASN 5270.0057
ARG 5280.0069
PHE 5290.0051
THR 5300.0050
THR 5310.0050
THR 5320.0053
LEU 5330.0053
ASN 5340.0048
ASP 5350.0045
PHE 5360.0041
ASN 5370.0053
LEU 5380.0049
VAL 5390.0037
ALA 5400.0041
MET 5410.0073
LYS 5420.0059
TYR 5430.0040
ASN 5440.0047
TYR 5450.0036
GLU 5460.0040
PRO 5470.0041
LEU 5480.0039
THR 5490.0093
GLN 5500.0100
ASP 5510.0091
HIE 5520.0052
VAL 5530.0031
ASP 5540.0038
ILE 5550.0018
LEU 5560.0010
GLY 5570.0030
PRO 5580.0029
LEU 5590.0018
SER 5600.0016
ALA 5610.0021
GLN 5620.0017
THR 5630.0014
GLY 5640.0019
ILE 5650.0021
ALA 5660.0020
VAL 5670.0024
LEU 5680.0022
ASP 5690.0036
MET 5700.0037
CYS 5710.0039
ALA 5720.0040
SER 5730.0033
LEU 5740.0033
LYS 5750.0025
GLU 5760.0023
LEU 5770.0020
LEU 5780.0005
GLN 5790.0018
ASN 5800.0032
GLY 5810.0026
MET 5820.0037
ASN 5830.0051
GLY 5840.0060
ARG 5850.0041
THR 5860.0039
ILE 5870.0042
LEU 5880.0047
GLY 5890.0062
SER 5900.0041
ALA 5910.0024
LEU 5920.0016
LEU 5930.0014
GLU 5940.0012
ASP 5950.0024
GLU 5960.0032
PHE 5970.0034
THR 5980.0040
PRO 5990.0038
PHE 6000.0055
ASP 6010.0053
VAL 6020.0042
VAL 6030.0059
ARG 6040.0077
GLN 6050.0055
CYS 6060.0076
SER 6070.0102
GLY 6080.0098
VAL 6090.0126
THR 6100.0115
PHE 6110.0114
GLN 6120.0125

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.