CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  apo-dimer-test  ***

<R2> analysis for 2601021904551024081

---  normal mode 56  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0567
SER 10.0044
GLY 20.0042
PHE 30.0039
ARG 40.0029
LYS 50.0023
MET 60.0024
ALA 70.0024
PHE 80.0029
PRO 90.0032
SER 100.0018
GLY 110.0030
LYS 120.0054
VAL 130.0031
GLU 140.0029
GLY 150.0035
CYS 160.0046
MET 170.0045
VAL 180.0045
GLN 190.0051
VAL 200.0056
THR 210.0056
CYS 220.0053
GLY 230.0050
THR 240.0051
THR 250.0039
THR 260.0038
LEU 270.0036
ASN 280.0036
GLY 290.0053
LEU 300.0048
TRP 310.0046
LEU 320.0049
ASP 330.0053
ASP 340.0054
VAL 350.0060
VAL 360.0056
TYR 370.0024
CYS 380.0026
PRO 390.0026
ARG 400.0025
HID 410.0014
VAL 420.0022
ILE 430.0019
CYS 440.0016
THR 450.0028
SER 460.0026
GLU 470.0023
ASP 480.0025
MET 490.0047
LEU 500.0052
ASN 510.0032
PRO 520.0016
ASN 530.0041
TYR 540.0029
GLU 550.0040
ASP 560.0044
LEU 570.0027
LEU 580.0034
ILE 590.0047
ARG 600.0033
LYS 610.0044
SER 620.0058
ASN 630.0072
HIE 640.0080
ASN 650.0050
PHE 660.0051
LEU 670.0044
VAL 680.0044
GLN 690.0043
ALA 700.0054
GLY 710.0089
ASN 720.0091
VAL 730.0049
GLN 740.0049
LEU 750.0036
ARG 760.0073
VAL 770.0066
ILE 780.0089
GLY 790.0089
HID 800.0085
SER 810.0034
MET 820.0032
GLN 830.0038
ASN 840.0052
CYS 850.0046
VAL 860.0045
LEU 870.0040
LYS 880.0037
LEU 890.0073
LYS 900.0086
VAL 910.0071
ASP 920.0091
THR 930.0045
ALA 940.0061
ASN 950.0058
PRO 960.0069
LYS 970.0036
THR 980.0074
PRO 990.0090
LYS 1000.0159
TYR 1010.0102
LYS 1020.0099
PHE 1030.0077
VAL 1040.0080
ARG 1050.0074
ILE 1060.0055
GLN 1070.0064
PRO 1080.0063
GLY 1090.0033
GLN 1100.0032
THR 1110.0022
PHE 1120.0022
SER 1130.0031
VAL 1140.0028
LEU 1150.0021
ALA 1160.0019
CYS 1170.0045
TYR 1180.0055
ASN 1190.0069
GLY 1200.0063
SER 1210.0061
PRO 1220.0042
SER 1230.0034
GLY 1240.0021
VAL 1250.0021
TYR 1260.0025
GLN 1270.0023
CYS 1280.0028
ALA 1290.0026
MET 1300.0034
ARG 1310.0031
PRO 1320.0041
ASN 1330.0039
PHE 1340.0049
THR 1350.0052
ILE 1360.0052
LYS 1370.0069
GLY 1380.0055
SER 1390.0048
PHE 1400.0054
LEU 1410.0060
ASN 1420.0083
GLY 1430.0073
SER 1440.0047
CYS 1450.0023
GLY 1460.0019
SER 1470.0017
VAL 1480.0020
GLY 1490.0032
PHE 1500.0043
ASN 1510.0054
ILE 1520.0067
ASP 1530.0110
TYR 1540.0153
ASP 1550.0164
CYS 1560.0131
VAL 1570.0077
SER 1580.0073
PHE 1590.0057
CYS 1600.0054
TYR 1610.0040
MET 1620.0043
HIE 1630.0040
HIE 1640.0035
MET 1650.0096
GLU 1660.0103
LEU 1670.0087
PRO 1680.0114
THR 1690.0112
GLY 1700.0112
VAL 1710.0083
HIE 1720.0074
ALA 1730.0047
GLY 1740.0058
THR 1750.0066
ASP 1760.0077
LEU 1770.0060
GLU 1780.0063
GLY 1790.0080
ASN 1800.0085
PHE 1810.0069
TYR 1820.0059
GLY 1830.0052
PRO 1840.0054
PHE 1850.0040
VAL 1860.0042
ASP 1870.0061
ARG 1880.0050
GLN 1890.0115
THR 1900.0102
ALA 1910.0107
GLN 1920.0056
ALA 1930.0084
ALA 1940.0060
GLY 1950.0062
THR 1960.0072
ASP 1970.0046
THR 1980.0028
THR 1990.0010
ILE 2000.0040
THR 2010.0056
VAL 2020.0056
ASN 2030.0060
VAL 2040.0057
LEU 2050.0052
ALA 2060.0044
TRP 2070.0053
LEU 2080.0047
TYR 2090.0023
ALA 2100.0052
ALA 2110.0079
VAL 2120.0069
ILE 2130.0061
ASN 2140.0098
GLY 2150.0135
ASP 2160.0134
ARG 2170.0107
TRP 2180.0100
PHE 2190.0047
LEU 2200.0074
ASN 2210.0085
ARG 2220.0116
PHE 2230.0071
THR 2240.0070
THR 2250.0093
THR 2260.0083
LEU 2270.0072
ASN 2280.0068
ASP 2290.0049
PHE 2300.0049
ASN 2310.0055
LEU 2320.0062
VAL 2330.0057
ALA 2340.0043
MET 2350.0156
LYS 2360.0190
TYR 2370.0098
ASN 2380.0087
TYR 2390.0030
GLU 2400.0061
PRO 2410.0045
LEU 2420.0055
THR 2430.0091
GLN 2440.0123
ASP 2450.0058
HIE 2460.0056
VAL 2470.0070
ASP 2480.0073
ILE 2490.0116
LEU 2500.0078
GLY 2510.0107
PRO 2520.0138
LEU 2530.0079
SER 2540.0087
ALA 2550.0147
GLN 2560.0130
THR 2570.0107
GLY 2580.0140
ILE 2590.0075
ALA 2600.0068
VAL 2610.0043
LEU 2620.0042
ASP 2630.0033
MET 2640.0043
CYS 2650.0066
ALA 2660.0070
SER 2670.0077
LEU 2680.0067
LYS 2690.0081
GLU 2700.0092
LEU 2710.0063
LEU 2720.0055
GLN 2730.0153
ASN 2740.0161
GLY 2750.0103
MET 2760.0047
ASN 2770.0070
GLY 2780.0080
ARG 2790.0054
THR 2800.0062
ILE 2810.0073
LEU 2820.0088
GLY 2830.0078
SER 2840.0074
ALA 2850.0025
LEU 2860.0026
LEU 2870.0032
GLU 2880.0048
ASP 2890.0049
GLU 2900.0050
PHE 2910.0050
THR 2920.0050
PRO 2930.0068
PHE 2940.0074
ASP 2950.0066
VAL 2960.0048
VAL 2970.0058
ARG 2980.0060
GLN 2990.0045
CYS 3000.0046
SER 3010.0081
GLY 3020.0082
VAL 3030.0084
THR 3040.0086
PHE 3050.0094
GLN 3060.0087
SER 3070.0066
GLY 3080.0068
PHE 3090.0051
ARG 3100.0048
LYS 3110.0045
MET 3120.0040
ALA 3130.0026
PHE 3140.0028
PRO 3150.0024
SER 3160.0028
GLY 3170.0058
LYS 3180.0065
VAL 3190.0069
GLU 3200.0063
GLY 3210.0090
CYS 3220.0078
MET 3230.0073
VAL 3240.0055
GLN 3250.0037
VAL 3260.0036
THR 3270.0038
CYS 3280.0042
GLY 3290.0024
THR 3300.0017
THR 3310.0013
THR 3320.0020
LEU 3330.0045
ASN 3340.0047
GLY 3350.0046
LEU 3360.0051
TRP 3370.0070
LEU 3380.0080
ASP 3390.0078
ASP 3400.0060
VAL 3410.0048
VAL 3420.0050
TYR 3430.0050
CYS 3440.0052
PRO 3450.0034
ARG 3460.0030
HID 3470.0042
VAL 3480.0036
ILE 3490.0044
CYS 3500.0029
THR 3510.0036
SER 3520.0042
GLU 3530.0087
ASP 3540.0023
MET 3550.0045
LEU 3560.0073
ASN 3570.0027
PRO 3580.0020
ASN 3590.0028
TYR 3600.0056
GLU 3610.0070
ASP 3620.0082
LEU 3630.0064
LEU 3640.0038
ILE 3650.0092
ARG 3660.0048
LYS 3670.0023
SER 3680.0086
ASN 3690.0097
HIE 3700.0118
ASN 3710.0100
PHE 3720.0071
LEU 3730.0076
VAL 3740.0045
GLN 3750.0066
ALA 3760.0073
GLY 3770.0301
ASN 3780.0326
VAL 3790.0227
GLN 3800.0097
LEU 3810.0023
ARG 3820.0030
VAL 3830.0031
ILE 3840.0060
GLY 3850.0063
HID 3860.0035
SER 3870.0024
MET 3880.0027
GLN 3890.0045
ASN 3900.0071
CYS 3910.0078
VAL 3920.0058
LEU 3930.0032
LYS 3940.0030
LEU 3950.0032
LYS 3960.0034
VAL 3970.0052
ASP 3980.0082
THR 3990.0062
ALA 4000.0093
ASN 4010.0118
PRO 4020.0183
LYS 4030.0196
THR 4040.0155
PRO 4050.0123
LYS 4060.0099
TYR 4070.0064
LYS 4080.0040
PHE 4090.0011
VAL 4100.0022
ARG 4110.0049
ILE 4120.0050
GLN 4130.0081
PRO 4140.0068
GLY 4150.0033
GLN 4160.0029
THR 4170.0015
PHE 4180.0015
SER 4190.0026
VAL 4200.0030
LEU 4210.0032
ALA 4220.0032
CYS 4230.0027
TYR 4240.0033
ASN 4250.0053
GLY 4260.0041
SER 4270.0043
PRO 4280.0045
SER 4290.0027
GLY 4300.0013
VAL 4310.0007
TYR 4320.0017
GLN 4330.0017
CYS 4340.0015
ALA 4350.0014
MET 4360.0036
ARG 4370.0061
PRO 4380.0045
ASN 4390.0055
PHE 4400.0078
THR 4410.0066
ILE 4420.0060
LYS 4430.0059
GLY 4440.0059
SER 4450.0035
PHE 4460.0027
LEU 4470.0015
ASN 4480.0016
GLY 4490.0028
SER 4500.0029
CYS 4510.0034
GLY 4520.0040
SER 4530.0043
VAL 4540.0042
GLY 4550.0046
PHE 4560.0046
ASN 4570.0057
ILE 4580.0057
ASP 4590.0070
TYR 4600.0069
ASP 4610.0053
CYS 4620.0056
VAL 4630.0056
SER 4640.0049
PHE 4650.0025
CYS 4660.0031
TYR 4670.0051
MET 4680.0059
HIE 4690.0064
HIE 4700.0072
MET 4710.0069
GLU 4720.0062
LEU 4730.0056
PRO 4740.0080
THR 4750.0100
GLY 4760.0109
VAL 4770.0070
HIE 4780.0074
ALA 4790.0078
GLY 4800.0092
THR 4810.0091
ASP 4820.0063
LEU 4830.0044
GLU 4840.0049
GLY 4850.0085
ASN 4860.0093
PHE 4870.0104
TYR 4880.0101
GLY 4890.0101
PRO 4900.0088
PHE 4910.0079
VAL 4920.0092
ASP 4930.0087
ARG 4940.0019
GLN 4950.0100
THR 4960.0112
ALA 4970.0087
GLN 4980.0030
ALA 4990.0049
ALA 5000.0017
GLY 5010.0373
THR 5020.0284
ASP 5030.0118
THR 5040.0071
THR 5050.0037
ILE 5060.0031
THR 5070.0046
VAL 5080.0060
ASN 5090.0076
VAL 5100.0084
LEU 5110.0090
ALA 5120.0082
TRP 5130.0086
LEU 5140.0068
TYR 5150.0044
ALA 5160.0060
ALA 5170.0103
VAL 5180.0072
ILE 5190.0089
ASN 5200.0154
GLY 5210.0297
ASP 5220.0205
ARG 5230.0150
TRP 5240.0146
PHE 5250.0236
LEU 5260.0205
ASN 5270.0358
ARG 5280.0567
PHE 5290.0106
THR 5300.0025
THR 5310.0064
THR 5320.0140
LEU 5330.0091
ASN 5340.0084
ASP 5350.0073
PHE 5360.0052
ASN 5370.0099
LEU 5380.0102
VAL 5390.0068
ALA 5400.0090
MET 5410.0335
LYS 5420.0379
TYR 5430.0291
ASN 5440.0260
TYR 5450.0066
GLU 5460.0060
PRO 5470.0060
LEU 5480.0055
THR 5490.0103
GLN 5500.0142
ASP 5510.0119
HIE 5520.0067
VAL 5530.0076
ASP 5540.0081
ILE 5550.0075
LEU 5560.0086
GLY 5570.0092
PRO 5580.0073
LEU 5590.0050
SER 5600.0062
ALA 5610.0144
GLN 5620.0117
THR 5630.0103
GLY 5640.0140
ILE 5650.0046
ALA 5660.0055
VAL 5670.0064
LEU 5680.0070
ASP 5690.0065
MET 5700.0058
CYS 5710.0093
ALA 5720.0060
SER 5730.0094
LEU 5740.0096
LYS 5750.0126
GLU 5760.0129
LEU 5770.0177
LEU 5780.0158
GLN 5790.0254
ASN 5800.0330
GLY 5810.0349
MET 5820.0237
ASN 5830.0354
GLY 5840.0332
ARG 5850.0163
THR 5860.0172
ILE 5870.0146
LEU 5880.0197
GLY 5890.0167
SER 5900.0171
ALA 5910.0165
LEU 5920.0175
LEU 5930.0091
GLU 5940.0071
ASP 5950.0062
GLU 5960.0043
PHE 5970.0077
THR 5980.0078
PRO 5990.0067
PHE 6000.0056
ASP 6010.0056
VAL 6020.0046
VAL 6030.0039
ARG 6040.0032
GLN 6050.0030
CYS 6060.0033
SER 6070.0052
GLY 6080.0056
VAL 6090.0065
THR 6100.0061
PHE 6110.0057
GLN 6120.0062

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.