CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  apo-dimer-test  ***

<R2> analysis for 2601021904551024081

---  normal mode 61  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0353
SER 10.0021
GLY 20.0009
PHE 30.0010
ARG 40.0023
LYS 50.0022
MET 60.0016
ALA 70.0020
PHE 80.0034
PRO 90.0055
SER 100.0056
GLY 110.0095
LYS 120.0083
VAL 130.0050
GLU 140.0054
GLY 150.0063
CYS 160.0064
MET 170.0037
VAL 180.0033
GLN 190.0039
VAL 200.0040
THR 210.0035
CYS 220.0034
GLY 230.0032
THR 240.0032
THR 250.0034
THR 260.0030
LEU 270.0024
ASN 280.0015
GLY 290.0038
LEU 300.0050
TRP 310.0046
LEU 320.0057
ASP 330.0078
ASP 340.0053
VAL 350.0053
VAL 360.0053
TYR 370.0042
CYS 380.0041
PRO 390.0038
ARG 400.0027
HID 410.0053
VAL 420.0043
ILE 430.0032
CYS 440.0054
THR 450.0090
SER 460.0161
GLU 470.0105
ASP 480.0065
MET 490.0060
LEU 500.0045
ASN 510.0083
PRO 520.0092
ASN 530.0136
TYR 540.0086
GLU 550.0093
ASP 560.0123
LEU 570.0077
LEU 580.0036
ILE 590.0093
ARG 600.0113
LYS 610.0042
SER 620.0057
ASN 630.0074
HIE 640.0071
ASN 650.0044
PHE 660.0048
LEU 670.0046
VAL 680.0052
GLN 690.0100
ALA 700.0111
GLY 710.0267
ASN 720.0292
VAL 730.0139
GLN 740.0035
LEU 750.0077
ARG 760.0193
VAL 770.0093
ILE 780.0097
GLY 790.0100
HID 800.0103
SER 810.0061
MET 820.0054
GLN 830.0057
ASN 840.0051
CYS 850.0041
VAL 860.0045
LEU 870.0042
LYS 880.0053
LEU 890.0082
LYS 900.0072
VAL 910.0061
ASP 920.0078
THR 930.0069
ALA 940.0064
ASN 950.0082
PRO 960.0139
LYS 970.0084
THR 980.0089
PRO 990.0088
LYS 1000.0097
TYR 1010.0064
LYS 1020.0080
PHE 1030.0087
VAL 1040.0083
ARG 1050.0069
ILE 1060.0078
GLN 1070.0085
PRO 1080.0079
GLY 1090.0050
GLN 1100.0054
THR 1110.0048
PHE 1120.0051
SER 1130.0025
VAL 1140.0024
LEU 1150.0023
ALA 1160.0022
CYS 1170.0041
TYR 1180.0060
ASN 1190.0043
GLY 1200.0026
SER 1210.0021
PRO 1220.0016
SER 1230.0039
GLY 1240.0026
VAL 1250.0030
TYR 1260.0030
GLN 1270.0027
CYS 1280.0028
ALA 1290.0053
MET 1300.0052
ARG 1310.0050
PRO 1320.0061
ASN 1330.0042
PHE 1340.0037
THR 1350.0026
ILE 1360.0024
LYS 1370.0028
GLY 1380.0012
SER 1390.0018
PHE 1400.0031
LEU 1410.0138
ASN 1420.0207
GLY 1430.0162
SER 1440.0053
CYS 1450.0041
GLY 1460.0013
SER 1470.0016
VAL 1480.0028
GLY 1490.0058
PHE 1500.0025
ASN 1510.0020
ILE 1520.0041
ASP 1530.0200
TYR 1540.0255
ASP 1550.0198
CYS 1560.0065
VAL 1570.0028
SER 1580.0041
PHE 1590.0052
CYS 1600.0061
TYR 1610.0028
MET 1620.0021
HIE 1630.0022
HIE 1640.0032
MET 1650.0040
GLU 1660.0023
LEU 1670.0030
PRO 1680.0041
THR 1690.0059
GLY 1700.0042
VAL 1710.0027
HIE 1720.0020
ALA 1730.0026
GLY 1740.0026
THR 1750.0019
ASP 1760.0033
LEU 1770.0037
GLU 1780.0031
GLY 1790.0025
ASN 1800.0039
PHE 1810.0026
TYR 1820.0020
GLY 1830.0035
PRO 1840.0046
PHE 1850.0062
VAL 1860.0068
ASP 1870.0063
ARG 1880.0044
GLN 1890.0024
THR 1900.0072
ALA 1910.0109
GLN 1920.0097
ALA 1930.0123
ALA 1940.0042
GLY 1950.0054
THR 1960.0060
ASP 1970.0059
THR 1980.0057
THR 1990.0051
ILE 2000.0062
THR 2010.0030
VAL 2020.0028
ASN 2030.0028
VAL 2040.0029
LEU 2050.0025
ALA 2060.0025
TRP 2070.0024
LEU 2080.0022
TYR 2090.0017
ALA 2100.0016
ALA 2110.0007
VAL 2120.0012
ILE 2130.0036
ASN 2140.0037
GLY 2150.0027
ASP 2160.0020
ARG 2170.0026
TRP 2180.0036
PHE 2190.0036
LEU 2200.0039
ASN 2210.0096
ARG 2220.0083
PHE 2230.0053
THR 2240.0055
THR 2250.0048
THR 2260.0053
LEU 2270.0044
ASN 2280.0054
ASP 2290.0050
PHE 2300.0051
ASN 2310.0070
LEU 2320.0064
VAL 2330.0080
ALA 2340.0102
MET 2350.0144
LYS 2360.0128
TYR 2370.0061
ASN 2380.0073
TYR 2390.0071
GLU 2400.0089
PRO 2410.0032
LEU 2420.0013
THR 2430.0022
GLN 2440.0050
ASP 2450.0073
HIE 2460.0040
VAL 2470.0032
ASP 2480.0067
ILE 2490.0091
LEU 2500.0066
GLY 2510.0092
PRO 2520.0103
LEU 2530.0083
SER 2540.0087
ALA 2550.0125
GLN 2560.0119
THR 2570.0069
GLY 2580.0066
ILE 2590.0030
ALA 2600.0026
VAL 2610.0011
LEU 2620.0019
ASP 2630.0029
MET 2640.0019
CYS 2650.0039
ALA 2660.0036
SER 2670.0038
LEU 2680.0040
LYS 2690.0035
GLU 2700.0020
LEU 2710.0023
LEU 2720.0028
GLN 2730.0043
ASN 2740.0037
GLY 2750.0028
MET 2760.0026
ASN 2770.0058
GLY 2780.0054
ARG 2790.0047
THR 2800.0040
ILE 2810.0033
LEU 2820.0027
GLY 2830.0028
SER 2840.0034
ALA 2850.0048
LEU 2860.0040
LEU 2870.0039
GLU 2880.0054
ASP 2890.0046
GLU 2900.0038
PHE 2910.0028
THR 2920.0028
PRO 2930.0062
PHE 2940.0064
ASP 2950.0041
VAL 2960.0043
VAL 2970.0094
ARG 2980.0087
GLN 2990.0071
CYS 3000.0086
SER 3010.0149
GLY 3020.0146
VAL 3030.0153
THR 3040.0157
PHE 3050.0179
GLN 3060.0196
SER 3070.0058
GLY 3080.0054
PHE 3090.0018
ARG 3100.0022
LYS 3110.0052
MET 3120.0068
ALA 3130.0016
PHE 3140.0020
PRO 3150.0025
SER 3160.0021
GLY 3170.0052
LYS 3180.0048
VAL 3190.0070
GLU 3200.0072
GLY 3210.0084
CYS 3220.0059
MET 3230.0065
VAL 3240.0054
GLN 3250.0045
VAL 3260.0046
THR 3270.0066
CYS 3280.0078
GLY 3290.0129
THR 3300.0137
THR 3310.0113
THR 3320.0078
LEU 3330.0046
ASN 3340.0037
GLY 3350.0041
LEU 3360.0046
TRP 3370.0041
LEU 3380.0051
ASP 3390.0082
ASP 3400.0080
VAL 3410.0034
VAL 3420.0022
TYR 3430.0022
CYS 3440.0015
PRO 3450.0049
ARG 3460.0038
HID 3470.0048
VAL 3480.0049
ILE 3490.0102
CYS 3500.0174
THR 3510.0272
SER 3520.0348
GLU 3530.0253
ASP 3540.0143
MET 3550.0127
LEU 3560.0061
ASN 3570.0083
PRO 3580.0046
ASN 3590.0068
TYR 3600.0044
GLU 3610.0109
ASP 3620.0133
LEU 3630.0116
LEU 3640.0128
ILE 3650.0249
ARG 3660.0203
LYS 3670.0165
SER 3680.0206
ASN 3690.0100
HIE 3700.0124
ASN 3710.0105
PHE 3720.0104
LEU 3730.0076
VAL 3740.0035
GLN 3750.0036
ALA 3760.0026
GLY 3770.0126
ASN 3780.0151
VAL 3790.0107
GLN 3800.0083
LEU 3810.0027
ARG 3820.0030
VAL 3830.0040
ILE 3840.0044
GLY 3850.0077
HID 3860.0073
SER 3870.0066
MET 3880.0067
GLN 3890.0059
ASN 3900.0069
CYS 3910.0071
VAL 3920.0063
LEU 3930.0041
LYS 3940.0045
LEU 3950.0044
LYS 3960.0045
VAL 3970.0040
ASP 3980.0074
THR 3990.0110
ALA 4000.0141
ASN 4010.0165
PRO 4020.0243
LYS 4030.0178
THR 4040.0118
PRO 4050.0040
LYS 4060.0062
TYR 4070.0064
LYS 4080.0078
PHE 4090.0117
VAL 4100.0115
ARG 4110.0110
ILE 4120.0105
GLN 4130.0157
PRO 4140.0139
GLY 4150.0131
GLN 4160.0112
THR 4170.0087
PHE 4180.0074
SER 4190.0059
VAL 4200.0042
LEU 4210.0075
ALA 4220.0067
CYS 4230.0093
TYR 4240.0110
ASN 4250.0096
GLY 4260.0106
SER 4270.0115
PRO 4280.0101
SER 4290.0086
GLY 4300.0054
VAL 4310.0048
TYR 4320.0043
GLN 4330.0058
CYS 4340.0067
ALA 4350.0087
MET 4360.0093
ARG 4370.0129
PRO 4380.0134
ASN 4390.0110
PHE 4400.0112
THR 4410.0083
ILE 4420.0083
LYS 4430.0067
GLY 4440.0056
SER 4450.0022
PHE 4460.0054
LEU 4470.0075
ASN 4480.0110
GLY 4490.0071
SER 4500.0062
CYS 4510.0063
GLY 4520.0068
SER 4530.0069
VAL 4540.0072
GLY 4550.0068
PHE 4560.0075
ASN 4570.0045
ILE 4580.0034
ASP 4590.0050
TYR 4600.0061
ASP 4610.0078
CYS 4620.0065
VAL 4630.0060
SER 4640.0083
PHE 4650.0078
CYS 4660.0080
TYR 4670.0077
MET 4680.0075
HIE 4690.0065
HIE 4700.0058
MET 4710.0046
GLU 4720.0040
LEU 4730.0042
PRO 4740.0070
THR 4750.0086
GLY 4760.0075
VAL 4770.0038
HIE 4780.0046
ALA 4790.0057
GLY 4800.0093
THR 4810.0082
ASP 4820.0080
LEU 4830.0083
GLU 4840.0077
GLY 4850.0116
ASN 4860.0091
PHE 4870.0086
TYR 4880.0072
GLY 4890.0075
PRO 4900.0102
PHE 4910.0098
VAL 4920.0147
ASP 4930.0155
ARG 4940.0107
GLN 4950.0113
THR 4960.0121
ALA 4970.0137
GLN 4980.0117
ALA 4990.0161
ALA 5000.0093
GLY 5010.0231
THR 5020.0158
ASP 5030.0097
THR 5040.0161
THR 5050.0137
ILE 5060.0094
THR 5070.0074
VAL 5080.0029
ASN 5090.0065
VAL 5100.0061
LEU 5110.0034
ALA 5120.0017
TRP 5130.0023
LEU 5140.0017
TYR 5150.0037
ALA 5160.0048
ALA 5170.0032
VAL 5180.0078
ILE 5190.0098
ASN 5200.0074
GLY 5210.0102
ASP 5220.0055
ARG 5230.0060
TRP 5240.0058
PHE 5250.0027
LEU 5260.0055
ASN 5270.0081
ARG 5280.0116
PHE 5290.0140
THR 5300.0115
THR 5310.0096
THR 5320.0097
LEU 5330.0008
ASN 5340.0140
ASP 5350.0187
PHE 5360.0078
ASN 5370.0120
LEU 5380.0232
VAL 5390.0110
ALA 5400.0100
MET 5410.0276
LYS 5420.0094
TYR 5430.0152
ASN 5440.0334
TYR 5450.0091
GLU 5460.0109
PRO 5470.0089
LEU 5480.0085
THR 5490.0308
GLN 5500.0351
ASP 5510.0299
HIE 5520.0158
VAL 5530.0134
ASP 5540.0117
ILE 5550.0018
LEU 5560.0063
GLY 5570.0143
PRO 5580.0199
LEU 5590.0152
SER 5600.0159
ALA 5610.0329
GLN 5620.0301
THR 5630.0251
GLY 5640.0332
ILE 5650.0107
ALA 5660.0077
VAL 5670.0046
LEU 5680.0080
ASP 5690.0033
MET 5700.0035
CYS 5710.0033
ALA 5720.0030
SER 5730.0073
LEU 5740.0048
LYS 5750.0037
GLU 5760.0074
LEU 5770.0071
LEU 5780.0083
GLN 5790.0089
ASN 5800.0083
GLY 5810.0065
MET 5820.0127
ASN 5830.0282
GLY 5840.0353
ARG 5850.0183
THR 5860.0134
ILE 5870.0071
LEU 5880.0078
GLY 5890.0150
SER 5900.0098
ALA 5910.0094
LEU 5920.0042
LEU 5930.0075
GLU 5940.0072
ASP 5950.0076
GLU 5960.0083
PHE 5970.0082
THR 5980.0110
PRO 5990.0096
PHE 6000.0158
ASP 6010.0138
VAL 6020.0112
VAL 6030.0167
ARG 6040.0175
GLN 6050.0152
CYS 6060.0170
SER 6070.0221
GLY 6080.0199
VAL 6090.0133
THR 6100.0085
PHE 6110.0073
GLN 6120.0060

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.