CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  apo-dimer-test  ***

<R2> analysis for 2601021904551024081

---  normal mode 8  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0289
SER 10.0062
GLY 20.0059
PHE 30.0054
ARG 40.0051
LYS 50.0043
MET 60.0043
ALA 70.0042
PHE 80.0042
PRO 90.0041
SER 100.0039
GLY 110.0041
LYS 120.0038
VAL 130.0034
GLU 140.0036
GLY 150.0037
CYS 160.0032
MET 170.0031
VAL 180.0028
GLN 190.0027
VAL 200.0026
THR 210.0030
CYS 220.0036
GLY 230.0042
THR 240.0045
THR 250.0038
THR 260.0032
LEU 270.0029
ASN 280.0027
GLY 290.0024
LEU 300.0027
TRP 310.0032
LEU 320.0037
ASP 330.0046
ASP 340.0045
VAL 350.0039
VAL 360.0032
TYR 370.0029
CYS 380.0025
PRO 390.0029
ARG 400.0036
HID 410.0039
VAL 420.0034
ILE 430.0045
CYS 440.0050
THR 450.0058
SER 460.0063
GLU 470.0075
ASP 480.0067
MET 490.0057
LEU 500.0068
ASN 510.0071
PRO 520.0065
ASN 530.0072
TYR 540.0061
GLU 550.0071
ASP 560.0077
LEU 570.0067
LEU 580.0061
ILE 590.0072
ARG 600.0070
LYS 610.0056
SER 620.0054
ASN 630.0047
HIE 640.0041
ASN 650.0040
PHE 660.0034
LEU 670.0028
VAL 680.0026
GLN 690.0027
ALA 700.0031
GLY 710.0035
ASN 720.0035
VAL 730.0035
GLN 740.0030
LEU 750.0033
ARG 760.0037
VAL 770.0040
ILE 780.0050
GLY 790.0053
HID 800.0050
SER 810.0052
MET 820.0049
GLN 830.0048
ASN 840.0045
CYS 850.0037
VAL 860.0033
LEU 870.0036
LYS 880.0039
LEU 890.0039
LYS 900.0045
VAL 910.0042
ASP 920.0048
THR 930.0047
ALA 940.0048
ASN 950.0044
PRO 960.0053
LYS 970.0046
THR 980.0041
PRO 990.0042
LYS 1000.0041
TYR 1010.0038
LYS 1020.0035
PHE 1030.0030
VAL 1040.0027
ARG 1050.0018
ILE 1060.0013
GLN 1070.0011
PRO 1080.0014
GLY 1090.0017
GLN 1100.0010
THR 1110.0019
PHE 1120.0023
SER 1130.0035
VAL 1140.0034
LEU 1150.0035
ALA 1160.0035
CYS 1170.0035
TYR 1180.0037
ASN 1190.0037
GLY 1200.0035
SER 1210.0038
PRO 1220.0037
SER 1230.0038
GLY 1240.0037
VAL 1250.0041
TYR 1260.0040
GLN 1270.0037
CYS 1280.0035
ALA 1290.0023
MET 1300.0012
ARG 1310.0022
PRO 1320.0027
ASN 1330.0029
PHE 1340.0017
THR 1350.0021
ILE 1360.0026
LYS 1370.0037
GLY 1380.0038
SER 1390.0040
PHE 1400.0038
LEU 1410.0042
ASN 1420.0042
GLY 1430.0039
SER 1440.0036
CYS 1450.0027
GLY 1460.0024
SER 1470.0027
VAL 1480.0026
GLY 1490.0024
PHE 1500.0027
ASN 1510.0029
ILE 1520.0034
ASP 1530.0036
TYR 1540.0041
ASP 1550.0041
CYS 1560.0036
VAL 1570.0035
SER 1580.0030
PHE 1590.0026
CYS 1600.0021
TYR 1610.0021
MET 1620.0020
HIE 1630.0021
HIE 1640.0023
MET 1650.0024
GLU 1660.0030
LEU 1670.0035
PRO 1680.0042
THR 1690.0043
GLY 1700.0040
VAL 1710.0034
HIE 1720.0024
ALA 1730.0023
GLY 1740.0020
THR 1750.0019
ASP 1760.0020
LEU 1770.0027
GLU 1780.0032
GLY 1790.0029
ASN 1800.0030
PHE 1810.0023
TYR 1820.0021
GLY 1830.0027
PRO 1840.0034
PHE 1850.0033
VAL 1860.0038
ASP 1870.0036
ARG 1880.0046
GLN 1890.0050
THR 1900.0053
ALA 1910.0051
GLN 1920.0040
ALA 1930.0045
ALA 1940.0039
GLY 1950.0060
THR 1960.0074
ASP 1970.0055
THR 1980.0070
THR 1990.0067
ILE 2000.0049
THR 2010.0088
VAL 2020.0074
ASN 2030.0042
VAL 2040.0072
LEU 2050.0087
ALA 2060.0052
TRP 2070.0059
LEU 2080.0093
TYR 2090.0076
ALA 2100.0060
ALA 2110.0099
VAL 2120.0108
ILE 2130.0073
ASN 2140.0098
GLY 2150.0129
ASP 2160.0141
ARG 2170.0169
TRP 2180.0207
PHE 2190.0195
LEU 2200.0195
ASN 2210.0252
ARG 2220.0289
PHE 2230.0284
THR 2240.0268
THR 2250.0266
THR 2260.0273
LEU 2270.0247
ASN 2280.0276
ASP 2290.0279
PHE 2300.0231
ASN 2310.0221
LEU 2320.0255
VAL 2330.0228
ALA 2340.0183
MET 2350.0198
LYS 2360.0217
TYR 2370.0176
ASN 2380.0143
TYR 2390.0123
GLU 2400.0116
PRO 2410.0170
LEU 2420.0168
THR 2430.0195
GLN 2440.0212
ASP 2450.0183
HIE 2460.0140
VAL 2470.0158
ASP 2480.0165
ILE 2490.0114
LEU 2500.0096
GLY 2510.0116
PRO 2520.0078
LEU 2530.0063
SER 2540.0106
ALA 2550.0101
GLN 2560.0065
THR 2570.0092
GLY 2580.0126
ILE 2590.0148
ALA 2600.0170
VAL 2610.0162
LEU 2620.0203
ASP 2630.0204
MET 2640.0165
CYS 2650.0178
ALA 2660.0217
SER 2670.0195
LEU 2680.0168
LYS 2690.0209
GLU 2700.0232
LEU 2710.0201
LEU 2720.0196
GLN 2730.0236
ASN 2740.0251
GLY 2750.0219
MET 2760.0209
ASN 2770.0246
GLY 2780.0241
ARG 2790.0218
THR 2800.0175
ILE 2810.0132
LEU 2820.0118
GLY 2830.0145
SER 2840.0122
ALA 2850.0129
LEU 2860.0099
LEU 2870.0086
GLU 2880.0064
ASP 2890.0041
GLU 2900.0029
PHE 2910.0024
THR 2920.0011
PRO 2930.0022
PHE 2940.0020
ASP 2950.0018
VAL 2960.0019
VAL 2970.0015
ARG 2980.0031
GLN 2990.0040
CYS 3000.0036
SER 3010.0041
GLY 3020.0040
VAL 3030.0039
THR 3040.0039
PHE 3050.0040
GLN 3060.0041
SER 3070.0057
GLY 3080.0054
PHE 3090.0053
ARG 3100.0050
LYS 3110.0046
MET 3120.0047
ALA 3130.0037
PHE 3140.0036
PRO 3150.0038
SER 3160.0037
GLY 3170.0040
LYS 3180.0035
VAL 3190.0033
GLU 3200.0037
GLY 3210.0040
CYS 3220.0032
MET 3230.0031
VAL 3240.0029
GLN 3250.0029
VAL 3260.0026
THR 3270.0029
CYS 3280.0034
GLY 3290.0042
THR 3300.0047
THR 3310.0043
THR 3320.0037
LEU 3330.0031
ASN 3340.0028
GLY 3350.0024
LEU 3360.0025
TRP 3370.0028
LEU 3380.0034
ASP 3390.0043
ASP 3400.0042
VAL 3410.0035
VAL 3420.0027
TYR 3430.0025
CYS 3440.0024
PRO 3450.0028
ARG 3460.0036
HID 3470.0040
VAL 3480.0034
ILE 3490.0046
CYS 3500.0055
THR 3510.0062
SER 3520.0071
GLU 3530.0083
ASP 3540.0074
MET 3550.0065
LEU 3560.0078
ASN 3570.0081
PRO 3580.0072
ASN 3590.0078
TYR 3600.0065
GLU 3610.0075
ASP 3620.0081
LEU 3630.0069
LEU 3640.0061
ILE 3650.0073
ARG 3660.0068
LYS 3670.0053
SER 3680.0050
ASN 3690.0040
HIE 3700.0033
ASN 3710.0035
PHE 3720.0028
LEU 3730.0024
VAL 3740.0024
GLN 3750.0029
ALA 3760.0035
GLY 3770.0042
ASN 3780.0044
VAL 3790.0039
GLN 3800.0031
LEU 3810.0031
ARG 3820.0033
VAL 3830.0033
ILE 3840.0043
GLY 3850.0048
HID 3860.0045
SER 3870.0051
MET 3880.0050
GLN 3890.0044
ASN 3900.0044
CYS 3910.0037
VAL 3920.0032
LEU 3930.0035
LYS 3940.0036
LEU 3950.0034
LYS 3960.0040
VAL 3970.0037
ASP 3980.0045
THR 3990.0046
ALA 4000.0048
ASN 4010.0042
PRO 4020.0053
LYS 4030.0048
THR 4040.0043
PRO 4050.0038
LYS 4060.0037
TYR 4070.0031
LYS 4080.0028
PHE 4090.0025
VAL 4100.0022
ARG 4110.0020
ILE 4120.0016
GLN 4130.0026
PRO 4140.0028
GLY 4150.0022
GLN 4160.0013
THR 4170.0021
PHE 4180.0023
SER 4190.0029
VAL 4200.0031
LEU 4210.0037
ALA 4220.0039
CYS 4230.0039
TYR 4240.0042
ASN 4250.0039
GLY 4260.0037
SER 4270.0040
PRO 4280.0041
SER 4290.0040
GLY 4300.0041
VAL 4310.0042
TYR 4320.0042
GLN 4330.0038
CYS 4340.0031
ALA 4350.0024
MET 4360.0018
ARG 4370.0034
PRO 4380.0043
ASN 4390.0046
PHE 4400.0029
THR 4410.0026
ILE 4420.0029
LYS 4430.0039
GLY 4440.0041
SER 4450.0045
PHE 4460.0043
LEU 4470.0044
ASN 4480.0042
GLY 4490.0038
SER 4500.0037
CYS 4510.0030
GLY 4520.0025
SER 4530.0029
VAL 4540.0026
GLY 4550.0026
PHE 4560.0025
ASN 4570.0025
ILE 4580.0029
ASP 4590.0031
TYR 4600.0036
ASP 4610.0037
CYS 4620.0032
VAL 4630.0029
SER 4640.0025
PHE 4650.0022
CYS 4660.0020
TYR 4670.0020
MET 4680.0020
HIE 4690.0025
HIE 4700.0025
MET 4710.0030
GLU 4720.0035
LEU 4730.0041
PRO 4740.0052
THR 4750.0053
GLY 4760.0048
VAL 4770.0041
HIE 4780.0032
ALA 4790.0025
GLY 4800.0019
THR 4810.0022
ASP 4820.0022
LEU 4830.0024
GLU 4840.0030
GLY 4850.0026
ASN 4860.0029
PHE 4870.0027
TYR 4880.0024
GLY 4890.0032
PRO 4900.0042
PHE 4910.0039
VAL 4920.0040
ASP 4930.0041
ARG 4940.0053
GLN 4950.0059
THR 4960.0064
ALA 4970.0059
GLN 4980.0052
ALA 4990.0055
ALA 5000.0047
GLY 5010.0075
THR 5020.0107
ASP 5030.0088
THR 5040.0108
THR 5050.0101
ILE 5060.0074
THR 5070.0103
VAL 5080.0080
ASN 5090.0047
VAL 5100.0079
LEU 5110.0082
ALA 5120.0044
TRP 5130.0056
LEU 5140.0083
TYR 5150.0057
ALA 5160.0056
ALA 5170.0084
VAL 5180.0084
ILE 5190.0066
ASN 5200.0095
GLY 5210.0130
ASP 5220.0140
ARG 5230.0146
TRP 5240.0188
PHE 5250.0184
LEU 5260.0169
ASN 5270.0207
ARG 5280.0233
PHE 5290.0243
THR 5300.0229
THR 5310.0245
THR 5320.0255
LEU 5330.0236
ASN 5340.0275
ASP 5350.0281
PHE 5360.0235
ASN 5370.0236
LEU 5380.0277
VAL 5390.0256
ALA 5400.0214
MET 5410.0241
LYS 5420.0266
TYR 5430.0227
ASN 5440.0192
TYR 5450.0157
GLU 5460.0146
PRO 5470.0180
LEU 5480.0167
THR 5490.0190
GLN 5500.0197
ASP 5510.0171
HIE 5520.0129
VAL 5530.0137
ASP 5540.0139
ILE 5550.0102
LEU 5560.0078
GLY 5570.0085
PRO 5580.0054
LEU 5590.0029
SER 5600.0064
ALA 5610.0048
GLN 5620.0012
THR 5630.0046
GLY 5640.0063
ILE 5650.0098
ALA 5660.0126
VAL 5670.0130
LEU 5680.0175
ASP 5690.0167
MET 5700.0139
CYS 5710.0167
ALA 5720.0203
SER 5730.0178
LEU 5740.0168
LYS 5750.0214
GLU 5760.0236
LEU 5770.0206
LEU 5780.0219
GLN 5790.0260
ASN 5800.0271
GLY 5810.0227
MET 5820.0209
ASN 5830.0258
GLY 5840.0258
ARG 5850.0206
THR 5860.0168
ILE 5870.0134
LEU 5880.0119
GLY 5890.0121
SER 5900.0109
ALA 5910.0111
LEU 5920.0103
LEU 5930.0114
GLU 5940.0084
ASP 5950.0054
GLU 5960.0031
PHE 5970.0022
THR 5980.0009
PRO 5990.0012
PHE 6000.0018
ASP 6010.0019
VAL 6020.0023
VAL 6030.0023
ARG 6040.0035
GLN 6050.0042
CYS 6060.0042
SER 6070.0043
GLY 6080.0049
VAL 6090.0039
THR 6100.0037
PHE 6110.0035
GLN 6120.0034

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.