CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  apo-dimer-test  ***

<R2> analysis for 2601021904551024081

---  normal mode 85  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0442
SER 10.0028
GLY 20.0039
PHE 30.0036
ARG 40.0050
LYS 50.0049
MET 60.0049
ALA 70.0049
PHE 80.0048
PRO 90.0034
SER 100.0036
GLY 110.0053
LYS 120.0047
VAL 130.0035
GLU 140.0062
GLY 150.0081
CYS 160.0081
MET 170.0064
VAL 180.0059
GLN 190.0058
VAL 200.0058
THR 210.0077
CYS 220.0058
GLY 230.0100
THR 240.0133
THR 250.0074
THR 260.0074
LEU 270.0069
ASN 280.0068
GLY 290.0059
LEU 300.0045
TRP 310.0047
LEU 320.0045
ASP 330.0031
ASP 340.0032
VAL 350.0018
VAL 360.0008
TYR 370.0048
CYS 380.0029
PRO 390.0022
ARG 400.0039
HID 410.0021
VAL 420.0028
ILE 430.0023
CYS 440.0023
THR 450.0097
SER 460.0092
GLU 470.0104
ASP 480.0097
MET 490.0087
LEU 500.0071
ASN 510.0050
PRO 520.0065
ASN 530.0125
TYR 540.0095
GLU 550.0186
ASP 560.0151
LEU 570.0068
LEU 580.0090
ILE 590.0151
ARG 600.0168
LYS 610.0017
SER 620.0032
ASN 630.0050
HIE 640.0097
ASN 650.0053
PHE 660.0044
LEU 670.0050
VAL 680.0048
GLN 690.0046
ALA 700.0102
GLY 710.0124
ASN 720.0138
VAL 730.0073
GLN 740.0066
LEU 750.0093
ARG 760.0130
VAL 770.0050
ILE 780.0040
GLY 790.0031
HID 800.0035
SER 810.0147
MET 820.0141
GLN 830.0153
ASN 840.0150
CYS 850.0069
VAL 860.0060
LEU 870.0066
LYS 880.0088
LEU 890.0029
LYS 900.0044
VAL 910.0050
ASP 920.0069
THR 930.0024
ALA 940.0016
ASN 950.0056
PRO 960.0079
LYS 970.0093
THR 980.0077
PRO 990.0065
LYS 1000.0105
TYR 1010.0165
LYS 1020.0174
PHE 1030.0157
VAL 1040.0154
ARG 1050.0064
ILE 1060.0075
GLN 1070.0098
PRO 1080.0108
GLY 1090.0047
GLN 1100.0034
THR 1110.0014
PHE 1120.0033
SER 1130.0031
VAL 1140.0022
LEU 1150.0028
ALA 1160.0026
CYS 1170.0070
TYR 1180.0075
ASN 1190.0094
GLY 1200.0099
SER 1210.0093
PRO 1220.0069
SER 1230.0034
GLY 1240.0030
VAL 1250.0041
TYR 1260.0042
GLN 1270.0044
CYS 1280.0043
ALA 1290.0032
MET 1300.0029
ARG 1310.0035
PRO 1320.0051
ASN 1330.0057
PHE 1340.0054
THR 1350.0041
ILE 1360.0036
LYS 1370.0047
GLY 1380.0050
SER 1390.0047
PHE 1400.0033
LEU 1410.0040
ASN 1420.0064
GLY 1430.0089
SER 1440.0065
CYS 1450.0017
GLY 1460.0017
SER 1470.0017
VAL 1480.0022
GLY 1490.0040
PHE 1500.0044
ASN 1510.0046
ILE 1520.0044
ASP 1530.0123
TYR 1540.0110
ASP 1550.0106
CYS 1560.0119
VAL 1570.0093
SER 1580.0102
PHE 1590.0084
CYS 1600.0079
TYR 1610.0014
MET 1620.0006
HIE 1630.0011
HIE 1640.0021
MET 1650.0056
GLU 1660.0031
LEU 1670.0045
PRO 1680.0101
THR 1690.0114
GLY 1700.0077
VAL 1710.0053
HIE 1720.0028
ALA 1730.0054
GLY 1740.0026
THR 1750.0017
ASP 1760.0034
LEU 1770.0090
GLU 1780.0109
GLY 1790.0093
ASN 1800.0073
PHE 1810.0055
TYR 1820.0060
GLY 1830.0096
PRO 1840.0118
PHE 1850.0072
VAL 1860.0091
ASP 1870.0086
ARG 1880.0098
GLN 1890.0153
THR 1900.0129
ALA 1910.0091
GLN 1920.0043
ALA 1930.0169
ALA 1940.0097
GLY 1950.0069
THR 1960.0047
ASP 1970.0057
THR 1980.0050
THR 1990.0042
ILE 2000.0030
THR 2010.0012
VAL 2020.0014
ASN 2030.0010
VAL 2040.0010
LEU 2050.0022
ALA 2060.0016
TRP 2070.0023
LEU 2080.0029
TYR 2090.0048
ALA 2100.0040
ALA 2110.0066
VAL 2120.0082
ILE 2130.0065
ASN 2140.0079
GLY 2150.0102
ASP 2160.0104
ARG 2170.0108
TRP 2180.0092
PHE 2190.0092
LEU 2200.0131
ASN 2210.0112
ARG 2220.0068
PHE 2230.0100
THR 2240.0113
THR 2250.0080
THR 2260.0086
LEU 2270.0087
ASN 2280.0086
ASP 2290.0052
PHE 2300.0057
ASN 2310.0066
LEU 2320.0050
VAL 2330.0043
ALA 2340.0089
MET 2350.0117
LYS 2360.0118
TYR 2370.0077
ASN 2380.0088
TYR 2390.0056
GLU 2400.0042
PRO 2410.0049
LEU 2420.0045
THR 2430.0043
GLN 2440.0058
ASP 2450.0068
HIE 2460.0036
VAL 2470.0059
ASP 2480.0076
ILE 2490.0047
LEU 2500.0033
GLY 2510.0046
PRO 2520.0025
LEU 2530.0028
SER 2540.0047
ALA 2550.0036
GLN 2560.0039
THR 2570.0057
GLY 2580.0048
ILE 2590.0063
ALA 2600.0064
VAL 2610.0025
LEU 2620.0042
ASP 2630.0025
MET 2640.0035
CYS 2650.0041
ALA 2660.0044
SER 2670.0056
LEU 2680.0044
LYS 2690.0049
GLU 2700.0055
LEU 2710.0053
LEU 2720.0041
GLN 2730.0082
ASN 2740.0073
GLY 2750.0081
MET 2760.0060
ASN 2770.0125
GLY 2780.0073
ARG 2790.0031
THR 2800.0092
ILE 2810.0054
LEU 2820.0050
GLY 2830.0049
SER 2840.0050
ALA 2850.0063
LEU 2860.0045
LEU 2870.0021
GLU 2880.0016
ASP 2890.0029
GLU 2900.0031
PHE 2910.0028
THR 2920.0022
PRO 2930.0021
PHE 2940.0029
ASP 2950.0037
VAL 2960.0024
VAL 2970.0035
ARG 2980.0044
GLN 2990.0043
CYS 3000.0033
SER 3010.0076
GLY 3020.0070
VAL 3030.0073
THR 3040.0068
PHE 3050.0049
GLN 3060.0060
SER 3070.0058
GLY 3080.0057
PHE 3090.0042
ARG 3100.0040
LYS 3110.0028
MET 3120.0027
ALA 3130.0032
PHE 3140.0030
PRO 3150.0040
SER 3160.0057
GLY 3170.0050
LYS 3180.0054
VAL 3190.0051
GLU 3200.0043
GLY 3210.0015
CYS 3220.0016
MET 3230.0022
VAL 3240.0025
GLN 3250.0065
VAL 3260.0043
THR 3270.0070
CYS 3280.0055
GLY 3290.0085
THR 3300.0104
THR 3310.0112
THR 3320.0129
LEU 3330.0062
ASN 3340.0041
GLY 3350.0015
LEU 3360.0020
TRP 3370.0070
LEU 3380.0063
ASP 3390.0065
ASP 3400.0079
VAL 3410.0073
VAL 3420.0064
TYR 3430.0067
CYS 3440.0060
PRO 3450.0008
ARG 3460.0011
HID 3470.0019
VAL 3480.0019
ILE 3490.0074
CYS 3500.0093
THR 3510.0156
SER 3520.0198
GLU 3530.0156
ASP 3540.0157
MET 3550.0090
LEU 3560.0118
ASN 3570.0107
PRO 3580.0099
ASN 3590.0114
TYR 3600.0090
GLU 3610.0100
ASP 3620.0079
LEU 3630.0070
LEU 3640.0055
ILE 3650.0064
ARG 3660.0051
LYS 3670.0054
SER 3680.0097
ASN 3690.0057
HIE 3700.0059
ASN 3710.0054
PHE 3720.0039
LEU 3730.0083
VAL 3740.0042
GLN 3750.0056
ALA 3760.0084
GLY 3770.0295
ASN 3780.0144
VAL 3790.0189
GLN 3800.0201
LEU 3810.0063
ARG 3820.0076
VAL 3830.0098
ILE 3840.0117
GLY 3850.0071
HID 3860.0059
SER 3870.0042
MET 3880.0049
GLN 3890.0105
ASN 3900.0103
CYS 3910.0068
VAL 3920.0058
LEU 3930.0077
LYS 3940.0080
LEU 3950.0072
LYS 3960.0077
VAL 3970.0113
ASP 3980.0112
THR 3990.0099
ALA 4000.0096
ASN 4010.0078
PRO 4020.0084
LYS 4030.0069
THR 4040.0059
PRO 4050.0064
LYS 4060.0070
TYR 4070.0043
LYS 4080.0055
PHE 4090.0054
VAL 4100.0057
ARG 4110.0053
ILE 4120.0060
GLN 4130.0161
PRO 4140.0142
GLY 4150.0126
GLN 4160.0122
THR 4170.0041
PHE 4180.0029
SER 4190.0042
VAL 4200.0065
LEU 4210.0059
ALA 4220.0074
CYS 4230.0087
TYR 4240.0104
ASN 4250.0110
GLY 4260.0087
SER 4270.0090
PRO 4280.0076
SER 4290.0070
GLY 4300.0065
VAL 4310.0062
TYR 4320.0059
GLN 4330.0032
CYS 4340.0026
ALA 4350.0027
MET 4360.0028
ARG 4370.0053
PRO 4380.0104
ASN 4390.0100
PHE 4400.0059
THR 4410.0048
ILE 4420.0070
LYS 4430.0092
GLY 4440.0094
SER 4450.0054
PHE 4460.0081
LEU 4470.0102
ASN 4480.0131
GLY 4490.0110
SER 4500.0083
CYS 4510.0052
GLY 4520.0023
SER 4530.0041
VAL 4540.0035
GLY 4550.0030
PHE 4560.0033
ASN 4570.0053
ILE 4580.0044
ASP 4590.0065
TYR 4600.0063
ASP 4610.0078
CYS 4620.0072
VAL 4630.0041
SER 4640.0065
PHE 4650.0032
CYS 4660.0030
TYR 4670.0026
MET 4680.0023
HIE 4690.0026
HIE 4700.0022
MET 4710.0031
GLU 4720.0051
LEU 4730.0165
PRO 4740.0417
THR 4750.0442
GLY 4760.0273
VAL 4770.0122
HIE 4780.0067
ALA 4790.0038
GLY 4800.0063
THR 4810.0037
ASP 4820.0058
LEU 4830.0063
GLU 4840.0071
GLY 4850.0065
ASN 4860.0071
PHE 4870.0052
TYR 4880.0050
GLY 4890.0073
PRO 4900.0068
PHE 4910.0057
VAL 4920.0055
ASP 4930.0019
ARG 4940.0031
GLN 4950.0058
THR 4960.0072
ALA 4970.0008
GLN 4980.0043
ALA 4990.0092
ALA 5000.0109
GLY 5010.0362
THR 5020.0236
ASP 5030.0132
THR 5040.0210
THR 5050.0119
ILE 5060.0091
THR 5070.0120
VAL 5080.0138
ASN 5090.0111
VAL 5100.0111
LEU 5110.0103
ALA 5120.0109
TRP 5130.0101
LEU 5140.0110
TYR 5150.0111
ALA 5160.0086
ALA 5170.0147
VAL 5180.0183
ILE 5190.0135
ASN 5200.0135
GLY 5210.0256
ASP 5220.0162
ARG 5230.0282
TRP 5240.0272
PHE 5250.0106
LEU 5260.0168
ASN 5270.0129
ARG 5280.0136
PHE 5290.0208
THR 5300.0163
THR 5310.0122
THR 5320.0094
LEU 5330.0053
ASN 5340.0097
ASP 5350.0132
PHE 5360.0097
ASN 5370.0130
LEU 5380.0142
VAL 5390.0150
ALA 5400.0140
MET 5410.0239
LYS 5420.0210
TYR 5430.0306
ASN 5440.0350
TYR 5450.0099
GLU 5460.0073
PRO 5470.0059
LEU 5480.0069
THR 5490.0079
GLN 5500.0129
ASP 5510.0173
HIE 5520.0173
VAL 5530.0124
ASP 5540.0176
ILE 5550.0231
LEU 5560.0172
GLY 5570.0119
PRO 5580.0126
LEU 5590.0058
SER 5600.0031
ALA 5610.0142
GLN 5620.0118
THR 5630.0163
GLY 5640.0204
ILE 5650.0115
ALA 5660.0082
VAL 5670.0089
LEU 5680.0102
ASP 5690.0121
MET 5700.0137
CYS 5710.0117
ALA 5720.0134
SER 5730.0118
LEU 5740.0099
LYS 5750.0106
GLU 5760.0136
LEU 5770.0119
LEU 5780.0140
GLN 5790.0170
ASN 5800.0163
GLY 5810.0226
MET 5820.0177
ASN 5830.0188
GLY 5840.0220
ARG 5850.0143
THR 5860.0136
ILE 5870.0117
LEU 5880.0133
GLY 5890.0204
SER 5900.0152
ALA 5910.0144
LEU 5920.0098
LEU 5930.0065
GLU 5940.0040
ASP 5950.0039
GLU 5960.0056
PHE 5970.0138
THR 5980.0159
PRO 5990.0137
PHE 6000.0144
ASP 6010.0103
VAL 6020.0072
VAL 6030.0088
ARG 6040.0091
GLN 6050.0036
CYS 6060.0052
SER 6070.0090
GLY 6080.0078
VAL 6090.0086
THR 6100.0048
PHE 6110.0035
GLN 6120.0088

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.