CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  apo-dimer-test  ***

<R2> analysis for 2601021904551024081

---  normal mode 89  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0435
SER 10.0062
GLY 20.0061
PHE 30.0051
ARG 40.0053
LYS 50.0064
MET 60.0055
ALA 70.0053
PHE 80.0040
PRO 90.0019
SER 100.0017
GLY 110.0027
LYS 120.0030
VAL 130.0023
GLU 140.0011
GLY 150.0033
CYS 160.0044
MET 170.0055
VAL 180.0048
GLN 190.0036
VAL 200.0042
THR 210.0024
CYS 220.0118
GLY 230.0257
THR 240.0305
THR 250.0125
THR 260.0085
LEU 270.0057
ASN 280.0028
GLY 290.0044
LEU 300.0042
TRP 310.0044
LEU 320.0040
ASP 330.0030
ASP 340.0028
VAL 350.0031
VAL 360.0042
TYR 370.0039
CYS 380.0028
PRO 390.0016
ARG 400.0017
HID 410.0047
VAL 420.0072
ILE 430.0071
CYS 440.0065
THR 450.0168
SER 460.0182
GLU 470.0106
ASP 480.0072
MET 490.0068
LEU 500.0065
ASN 510.0072
PRO 520.0084
ASN 530.0157
TYR 540.0074
GLU 550.0183
ASP 560.0157
LEU 570.0062
LEU 580.0097
ILE 590.0142
ARG 600.0149
LYS 610.0116
SER 620.0190
ASN 630.0159
HIE 640.0261
ASN 650.0082
PHE 660.0055
LEU 670.0085
VAL 680.0071
GLN 690.0068
ALA 700.0154
GLY 710.0254
ASN 720.0240
VAL 730.0102
GLN 740.0034
LEU 750.0040
ARG 760.0126
VAL 770.0094
ILE 780.0082
GLY 790.0063
HID 800.0064
SER 810.0092
MET 820.0083
GLN 830.0092
ASN 840.0093
CYS 850.0026
VAL 860.0016
LEU 870.0038
LYS 880.0062
LEU 890.0031
LYS 900.0019
VAL 910.0048
ASP 920.0068
THR 930.0033
ALA 940.0012
ASN 950.0045
PRO 960.0064
LYS 970.0081
THR 980.0069
PRO 990.0068
LYS 1000.0059
TYR 1010.0053
LYS 1020.0067
PHE 1030.0081
VAL 1040.0086
ARG 1050.0112
ILE 1060.0116
GLN 1070.0120
PRO 1080.0078
GLY 1090.0067
GLN 1100.0078
THR 1110.0076
PHE 1120.0083
SER 1130.0050
VAL 1140.0042
LEU 1150.0027
ALA 1160.0023
CYS 1170.0057
TYR 1180.0057
ASN 1190.0050
GLY 1200.0053
SER 1210.0080
PRO 1220.0065
SER 1230.0052
GLY 1240.0043
VAL 1250.0035
TYR 1260.0042
GLN 1270.0052
CYS 1280.0055
ALA 1290.0041
MET 1300.0029
ARG 1310.0020
PRO 1320.0022
ASN 1330.0063
PHE 1340.0055
THR 1350.0052
ILE 1360.0032
LYS 1370.0035
GLY 1380.0022
SER 1390.0024
PHE 1400.0032
LEU 1410.0047
ASN 1420.0097
GLY 1430.0099
SER 1440.0033
CYS 1450.0031
GLY 1460.0028
SER 1470.0024
VAL 1480.0020
GLY 1490.0065
PHE 1500.0053
ASN 1510.0047
ILE 1520.0034
ASP 1530.0179
TYR 1540.0182
ASP 1550.0138
CYS 1560.0108
VAL 1570.0043
SER 1580.0059
PHE 1590.0065
CYS 1600.0081
TYR 1610.0021
MET 1620.0018
HIE 1630.0025
HIE 1640.0028
MET 1650.0085
GLU 1660.0091
LEU 1670.0069
PRO 1680.0121
THR 1690.0081
GLY 1700.0062
VAL 1710.0066
HIE 1720.0061
ALA 1730.0062
GLY 1740.0045
THR 1750.0030
ASP 1760.0025
LEU 1770.0044
GLU 1780.0057
GLY 1790.0038
ASN 1800.0074
PHE 1810.0056
TYR 1820.0048
GLY 1830.0081
PRO 1840.0119
PHE 1850.0089
VAL 1860.0106
ASP 1870.0089
ARG 1880.0061
GLN 1890.0108
THR 1900.0205
ALA 1910.0242
GLN 1920.0133
ALA 1930.0214
ALA 1940.0139
GLY 1950.0114
THR 1960.0088
ASP 1970.0053
THR 1980.0067
THR 1990.0066
ILE 2000.0056
THR 2010.0069
VAL 2020.0061
ASN 2030.0063
VAL 2040.0067
LEU 2050.0088
ALA 2060.0078
TRP 2070.0071
LEU 2080.0068
TYR 2090.0079
ALA 2100.0034
ALA 2110.0036
VAL 2120.0079
ILE 2130.0109
ASN 2140.0113
GLY 2150.0159
ASP 2160.0126
ARG 2170.0106
TRP 2180.0110
PHE 2190.0114
LEU 2200.0187
ASN 2210.0049
ARG 2220.0077
PHE 2230.0149
THR 2240.0218
THR 2250.0135
THR 2260.0119
LEU 2270.0123
ASN 2280.0219
ASP 2290.0172
PHE 2300.0106
ASN 2310.0142
LEU 2320.0135
VAL 2330.0165
ALA 2340.0134
MET 2350.0255
LYS 2360.0373
TYR 2370.0166
ASN 2380.0169
TYR 2390.0106
GLU 2400.0096
PRO 2410.0199
LEU 2420.0153
THR 2430.0286
GLN 2440.0435
ASP 2450.0396
HIE 2460.0228
VAL 2470.0218
ASP 2480.0313
ILE 2490.0104
LEU 2500.0107
GLY 2510.0089
PRO 2520.0165
LEU 2530.0133
SER 2540.0165
ALA 2550.0215
GLN 2560.0197
THR 2570.0228
GLY 2580.0245
ILE 2590.0177
ALA 2600.0206
VAL 2610.0074
LEU 2620.0116
ASP 2630.0147
MET 2640.0121
CYS 2650.0102
ALA 2660.0094
SER 2670.0084
LEU 2680.0091
LYS 2690.0036
GLU 2700.0044
LEU 2710.0057
LEU 2720.0094
GLN 2730.0280
ASN 2740.0267
GLY 2750.0202
MET 2760.0098
ASN 2770.0171
GLY 2780.0123
ARG 2790.0111
THR 2800.0118
ILE 2810.0051
LEU 2820.0054
GLY 2830.0061
SER 2840.0049
ALA 2850.0079
LEU 2860.0063
LEU 2870.0056
GLU 2880.0057
ASP 2890.0051
GLU 2900.0060
PHE 2910.0060
THR 2920.0071
PRO 2930.0102
PHE 2940.0109
ASP 2950.0104
VAL 2960.0076
VAL 2970.0126
ARG 2980.0120
GLN 2990.0110
CYS 3000.0112
SER 3010.0193
GLY 3020.0139
VAL 3030.0114
THR 3040.0065
PHE 3050.0052
GLN 3060.0095
SER 3070.0040
GLY 3080.0016
PHE 3090.0033
ARG 3100.0030
LYS 3110.0034
MET 3120.0034
ALA 3130.0021
PHE 3140.0018
PRO 3150.0027
SER 3160.0025
GLY 3170.0017
LYS 3180.0020
VAL 3190.0012
GLU 3200.0014
GLY 3210.0042
CYS 3220.0043
MET 3230.0033
VAL 3240.0041
GLN 3250.0050
VAL 3260.0027
THR 3270.0010
CYS 3280.0029
GLY 3290.0122
THR 3300.0129
THR 3310.0087
THR 3320.0067
LEU 3330.0047
ASN 3340.0045
GLY 3350.0043
LEU 3360.0042
TRP 3370.0047
LEU 3380.0049
ASP 3390.0059
ASP 3400.0064
VAL 3410.0030
VAL 3420.0023
TYR 3430.0013
CYS 3440.0014
PRO 3450.0038
ARG 3460.0039
HID 3470.0040
VAL 3480.0038
ILE 3490.0036
CYS 3500.0030
THR 3510.0114
SER 3520.0172
GLU 3530.0091
ASP 3540.0059
MET 3550.0051
LEU 3560.0059
ASN 3570.0053
PRO 3580.0060
ASN 3590.0060
TYR 3600.0072
GLU 3610.0052
ASP 3620.0083
LEU 3630.0094
LEU 3640.0070
ILE 3650.0095
ARG 3660.0127
LYS 3670.0092
SER 3680.0061
ASN 3690.0079
HIE 3700.0091
ASN 3710.0084
PHE 3720.0074
LEU 3730.0037
VAL 3740.0039
GLN 3750.0042
ALA 3760.0049
GLY 3770.0098
ASN 3780.0076
VAL 3790.0049
GLN 3800.0053
LEU 3810.0055
ARG 3820.0070
VAL 3830.0070
ILE 3840.0086
GLY 3850.0029
HID 3860.0034
SER 3870.0038
MET 3880.0047
GLN 3890.0078
ASN 3900.0102
CYS 3910.0095
VAL 3920.0056
LEU 3930.0039
LYS 3940.0031
LEU 3950.0015
LYS 3960.0031
VAL 3970.0052
ASP 3980.0045
THR 3990.0075
ALA 4000.0120
ASN 4010.0140
PRO 4020.0157
LYS 4030.0137
THR 4040.0070
PRO 4050.0111
LYS 4060.0099
TYR 4070.0063
LYS 4080.0040
PHE 4090.0027
VAL 4100.0033
ARG 4110.0039
ILE 4120.0026
GLN 4130.0077
PRO 4140.0071
GLY 4150.0062
GLN 4160.0026
THR 4170.0013
PHE 4180.0007
SER 4190.0007
VAL 4200.0013
LEU 4210.0005
ALA 4220.0029
CYS 4230.0038
TYR 4240.0060
ASN 4250.0080
GLY 4260.0070
SER 4270.0060
PRO 4280.0046
SER 4290.0039
GLY 4300.0033
VAL 4310.0031
TYR 4320.0036
GLN 4330.0037
CYS 4340.0031
ALA 4350.0021
MET 4360.0021
ARG 4370.0069
PRO 4380.0078
ASN 4390.0076
PHE 4400.0044
THR 4410.0048
ILE 4420.0058
LYS 4430.0084
GLY 4440.0091
SER 4450.0055
PHE 4460.0039
LEU 4470.0088
ASN 4480.0125
GLY 4490.0046
SER 4500.0033
CYS 4510.0038
GLY 4520.0041
SER 4530.0025
VAL 4540.0023
GLY 4550.0022
PHE 4560.0021
ASN 4570.0042
ILE 4580.0054
ASP 4590.0096
TYR 4600.0119
ASP 4610.0051
CYS 4620.0041
VAL 4630.0041
SER 4640.0045
PHE 4650.0018
CYS 4660.0015
TYR 4670.0031
MET 4680.0042
HIE 4690.0057
HIE 4700.0067
MET 4710.0058
GLU 4720.0054
LEU 4730.0069
PRO 4740.0066
THR 4750.0050
GLY 4760.0083
VAL 4770.0072
HIE 4780.0071
ALA 4790.0059
GLY 4800.0081
THR 4810.0079
ASP 4820.0047
LEU 4830.0034
GLU 4840.0064
GLY 4850.0087
ASN 4860.0091
PHE 4870.0093
TYR 4880.0073
GLY 4890.0052
PRO 4900.0056
PHE 4910.0066
VAL 4920.0103
ASP 4930.0085
ARG 4940.0063
GLN 4950.0053
THR 4960.0110
ALA 4970.0123
GLN 4980.0073
ALA 4990.0063
ALA 5000.0039
GLY 5010.0102
THR 5020.0082
ASP 5030.0090
THR 5040.0106
THR 5050.0065
ILE 5060.0054
THR 5070.0059
VAL 5080.0054
ASN 5090.0031
VAL 5100.0030
LEU 5110.0028
ALA 5120.0024
TRP 5130.0052
LEU 5140.0025
TYR 5150.0018
ALA 5160.0045
ALA 5170.0077
VAL 5180.0065
ILE 5190.0067
ASN 5200.0083
GLY 5210.0136
ASP 5220.0104
ARG 5230.0101
TRP 5240.0078
PHE 5250.0069
LEU 5260.0074
ASN 5270.0076
ARG 5280.0083
PHE 5290.0100
THR 5300.0066
THR 5310.0094
THR 5320.0129
LEU 5330.0069
ASN 5340.0083
ASP 5350.0084
PHE 5360.0062
ASN 5370.0057
LEU 5380.0036
VAL 5390.0021
ALA 5400.0015
MET 5410.0028
LYS 5420.0087
TYR 5430.0109
ASN 5440.0111
TYR 5450.0049
GLU 5460.0053
PRO 5470.0052
LEU 5480.0061
THR 5490.0081
GLN 5500.0061
ASP 5510.0079
HIE 5520.0067
VAL 5530.0037
ASP 5540.0027
ILE 5550.0034
LEU 5560.0035
GLY 5570.0065
PRO 5580.0020
LEU 5590.0024
SER 5600.0075
ALA 5610.0151
GLN 5620.0126
THR 5630.0107
GLY 5640.0163
ILE 5650.0073
ALA 5660.0082
VAL 5670.0069
LEU 5680.0099
ASP 5690.0051
MET 5700.0045
CYS 5710.0060
ALA 5720.0062
SER 5730.0067
LEU 5740.0052
LYS 5750.0049
GLU 5760.0064
LEU 5770.0043
LEU 5780.0044
GLN 5790.0087
ASN 5800.0082
GLY 5810.0048
MET 5820.0023
ASN 5830.0089
GLY 5840.0095
ARG 5850.0051
THR 5860.0066
ILE 5870.0076
LEU 5880.0121
GLY 5890.0109
SER 5900.0087
ALA 5910.0063
LEU 5920.0068
LEU 5930.0017
GLU 5940.0013
ASP 5950.0016
GLU 5960.0016
PHE 5970.0014
THR 5980.0032
PRO 5990.0035
PHE 6000.0052
ASP 6010.0039
VAL 6020.0039
VAL 6030.0053
ARG 6040.0055
GLN 6050.0036
CYS 6060.0031
SER 6070.0049
GLY 6080.0059
VAL 6090.0090
THR 6100.0095
PHE 6110.0093
GLN 6120.0106

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.