CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  apo-dimer-test  ***

<R2> analysis for 2601021904551024081

---  normal mode 99  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0507
SER 10.0010
GLY 20.0018
PHE 30.0019
ARG 40.0016
LYS 50.0046
MET 60.0043
ALA 70.0067
PHE 80.0080
PRO 90.0079
SER 100.0086
GLY 110.0097
LYS 120.0079
VAL 130.0078
GLU 140.0073
GLY 150.0072
CYS 160.0071
MET 170.0061
VAL 180.0058
GLN 190.0068
VAL 200.0068
THR 210.0070
CYS 220.0082
GLY 230.0095
THR 240.0084
THR 250.0047
THR 260.0041
LEU 270.0032
ASN 280.0044
GLY 290.0045
LEU 300.0062
TRP 310.0050
LEU 320.0075
ASP 330.0071
ASP 340.0056
VAL 350.0052
VAL 360.0056
TYR 370.0044
CYS 380.0027
PRO 390.0028
ARG 400.0047
HID 410.0068
VAL 420.0067
ILE 430.0060
CYS 440.0068
THR 450.0166
SER 460.0143
GLU 470.0097
ASP 480.0186
MET 490.0161
LEU 500.0116
ASN 510.0171
PRO 520.0225
ASN 530.0310
TYR 540.0104
GLU 550.0104
ASP 560.0183
LEU 570.0151
LEU 580.0122
ILE 590.0179
ARG 600.0254
LYS 610.0077
SER 620.0163
ASN 630.0198
HIE 640.0177
ASN 650.0100
PHE 660.0093
LEU 670.0090
VAL 680.0091
GLN 690.0098
ALA 700.0214
GLY 710.0276
ASN 720.0238
VAL 730.0156
GLN 740.0106
LEU 750.0109
ARG 760.0076
VAL 770.0093
ILE 780.0091
GLY 790.0120
HID 800.0148
SER 810.0050
MET 820.0071
GLN 830.0117
ASN 840.0156
CYS 850.0078
VAL 860.0056
LEU 870.0041
LYS 880.0043
LEU 890.0099
LYS 900.0092
VAL 910.0084
ASP 920.0089
THR 930.0121
ALA 940.0111
ASN 950.0103
PRO 960.0138
LYS 970.0103
THR 980.0101
PRO 990.0035
LYS 1000.0067
TYR 1010.0109
LYS 1020.0096
PHE 1030.0091
VAL 1040.0079
ARG 1050.0077
ILE 1060.0092
GLN 1070.0123
PRO 1080.0129
GLY 1090.0079
GLN 1100.0078
THR 1110.0066
PHE 1120.0055
SER 1130.0068
VAL 1140.0069
LEU 1150.0070
ALA 1160.0062
CYS 1170.0112
TYR 1180.0104
ASN 1190.0092
GLY 1200.0088
SER 1210.0096
PRO 1220.0096
SER 1230.0095
GLY 1240.0096
VAL 1250.0050
TYR 1260.0049
GLN 1270.0064
CYS 1280.0088
ALA 1290.0097
MET 1300.0092
ARG 1310.0079
PRO 1320.0076
ASN 1330.0071
PHE 1340.0090
THR 1350.0061
ILE 1360.0065
LYS 1370.0090
GLY 1380.0087
SER 1390.0075
PHE 1400.0065
LEU 1410.0076
ASN 1420.0065
GLY 1430.0077
SER 1440.0071
CYS 1450.0016
GLY 1460.0025
SER 1470.0052
VAL 1480.0074
GLY 1490.0086
PHE 1500.0067
ASN 1510.0054
ILE 1520.0057
ASP 1530.0114
TYR 1540.0169
ASP 1550.0127
CYS 1560.0049
VAL 1570.0075
SER 1580.0061
PHE 1590.0075
CYS 1600.0065
TYR 1610.0031
MET 1620.0021
HIE 1630.0009
HIE 1640.0018
MET 1650.0084
GLU 1660.0075
LEU 1670.0074
PRO 1680.0075
THR 1690.0054
GLY 1700.0036
VAL 1710.0013
HIE 1720.0053
ALA 1730.0068
GLY 1740.0036
THR 1750.0005
ASP 1760.0031
LEU 1770.0093
GLU 1780.0117
GLY 1790.0081
ASN 1800.0091
PHE 1810.0074
TYR 1820.0069
GLY 1830.0071
PRO 1840.0078
PHE 1850.0086
VAL 1860.0045
ASP 1870.0065
ARG 1880.0044
GLN 1890.0085
THR 1900.0105
ALA 1910.0183
GLN 1920.0176
ALA 1930.0507
ALA 1940.0207
GLY 1950.0234
THR 1960.0129
ASP 1970.0082
THR 1980.0055
THR 1990.0049
ILE 2000.0044
THR 2010.0036
VAL 2020.0034
ASN 2030.0029
VAL 2040.0030
LEU 2050.0029
ALA 2060.0017
TRP 2070.0017
LEU 2080.0023
TYR 2090.0045
ALA 2100.0053
ALA 2110.0059
VAL 2120.0044
ILE 2130.0043
ASN 2140.0071
GLY 2150.0080
ASP 2160.0089
ARG 2170.0091
TRP 2180.0065
PHE 2190.0019
LEU 2200.0049
ASN 2210.0104
ARG 2220.0061
PHE 2230.0082
THR 2240.0110
THR 2250.0064
THR 2260.0051
LEU 2270.0043
ASN 2280.0090
ASP 2290.0135
PHE 2300.0099
ASN 2310.0076
LEU 2320.0142
VAL 2330.0096
ALA 2340.0062
MET 2350.0092
LYS 2360.0074
TYR 2370.0026
ASN 2380.0036
TYR 2390.0018
GLU 2400.0045
PRO 2410.0065
LEU 2420.0071
THR 2430.0064
GLN 2440.0093
ASP 2450.0110
HIE 2460.0120
VAL 2470.0121
ASP 2480.0134
ILE 2490.0115
LEU 2500.0091
GLY 2510.0086
PRO 2520.0088
LEU 2530.0064
SER 2540.0058
ALA 2550.0063
GLN 2560.0058
THR 2570.0060
GLY 2580.0069
ILE 2590.0058
ALA 2600.0054
VAL 2610.0054
LEU 2620.0056
ASP 2630.0057
MET 2640.0058
CYS 2650.0041
ALA 2660.0042
SER 2670.0044
LEU 2680.0040
LYS 2690.0072
GLU 2700.0085
LEU 2710.0079
LEU 2720.0057
GLN 2730.0059
ASN 2740.0099
GLY 2750.0089
MET 2760.0113
ASN 2770.0121
GLY 2780.0161
ARG 2790.0106
THR 2800.0117
ILE 2810.0040
LEU 2820.0040
GLY 2830.0036
SER 2840.0046
ALA 2850.0045
LEU 2860.0042
LEU 2870.0041
GLU 2880.0033
ASP 2890.0062
GLU 2900.0065
PHE 2910.0051
THR 2920.0042
PRO 2930.0026
PHE 2940.0042
ASP 2950.0068
VAL 2960.0038
VAL 2970.0067
ARG 2980.0090
GLN 2990.0078
CYS 3000.0054
SER 3010.0137
GLY 3020.0138
VAL 3030.0162
THR 3040.0170
PHE 3050.0127
GLN 3060.0145
SER 3070.0131
GLY 3080.0121
PHE 3090.0074
ARG 3100.0069
LYS 3110.0063
MET 3120.0069
ALA 3130.0025
PHE 3140.0023
PRO 3150.0032
SER 3160.0029
GLY 3170.0055
LYS 3180.0038
VAL 3190.0036
GLU 3200.0053
GLY 3210.0040
CYS 3220.0043
MET 3230.0025
VAL 3240.0030
GLN 3250.0043
VAL 3260.0047
THR 3270.0067
CYS 3280.0091
GLY 3290.0139
THR 3300.0111
THR 3310.0069
THR 3320.0058
LEU 3330.0045
ASN 3340.0042
GLY 3350.0047
LEU 3360.0047
TRP 3370.0108
LEU 3380.0094
ASP 3390.0090
ASP 3400.0113
VAL 3410.0100
VAL 3420.0095
TYR 3430.0091
CYS 3440.0083
PRO 3450.0026
ARG 3460.0022
HID 3470.0019
VAL 3480.0030
ILE 3490.0069
CYS 3500.0080
THR 3510.0099
SER 3520.0112
GLU 3530.0159
ASP 3540.0127
MET 3550.0070
LEU 3560.0095
ASN 3570.0062
PRO 3580.0048
ASN 3590.0062
TYR 3600.0051
GLU 3610.0048
ASP 3620.0033
LEU 3630.0014
LEU 3640.0028
ILE 3650.0049
ARG 3660.0053
LYS 3670.0070
SER 3680.0108
ASN 3690.0069
HIE 3700.0117
ASN 3710.0119
PHE 3720.0121
LEU 3730.0100
VAL 3740.0080
GLN 3750.0047
ALA 3760.0061
GLY 3770.0342
ASN 3780.0208
VAL 3790.0116
GLN 3800.0245
LEU 3810.0219
ARG 3820.0221
VAL 3830.0118
ILE 3840.0214
GLY 3850.0025
HID 3860.0030
SER 3870.0058
MET 3880.0070
GLN 3890.0026
ASN 3900.0013
CYS 3910.0040
VAL 3920.0048
LEU 3930.0093
LYS 3940.0095
LEU 3950.0051
LYS 3960.0061
VAL 3970.0018
ASP 3980.0076
THR 3990.0042
ALA 4000.0167
ASN 4010.0139
PRO 4020.0146
LYS 4030.0240
THR 4040.0101
PRO 4050.0029
LYS 4060.0055
TYR 4070.0052
LYS 4080.0075
PHE 4090.0022
VAL 4100.0024
ARG 4110.0045
ILE 4120.0055
GLN 4130.0074
PRO 4140.0080
GLY 4150.0113
GLN 4160.0062
THR 4170.0014
PHE 4180.0019
SER 4190.0029
VAL 4200.0049
LEU 4210.0058
ALA 4220.0068
CYS 4230.0058
TYR 4240.0069
ASN 4250.0095
GLY 4260.0075
SER 4270.0093
PRO 4280.0103
SER 4290.0051
GLY 4300.0049
VAL 4310.0046
TYR 4320.0044
GLN 4330.0042
CYS 4340.0051
ALA 4350.0044
MET 4360.0037
ARG 4370.0128
PRO 4380.0148
ASN 4390.0113
PHE 4400.0070
THR 4410.0043
ILE 4420.0071
LYS 4430.0128
GLY 4440.0142
SER 4450.0052
PHE 4460.0027
LEU 4470.0022
ASN 4480.0033
GLY 4490.0054
SER 4500.0048
CYS 4510.0034
GLY 4520.0027
SER 4530.0030
VAL 4540.0031
GLY 4550.0039
PHE 4560.0039
ASN 4570.0021
ILE 4580.0020
ASP 4590.0042
TYR 4600.0062
ASP 4610.0018
CYS 4620.0021
VAL 4630.0028
SER 4640.0030
PHE 4650.0031
CYS 4660.0040
TYR 4670.0043
MET 4680.0043
HIE 4690.0070
HIE 4700.0092
MET 4710.0091
GLU 4720.0082
LEU 4730.0071
PRO 4740.0107
THR 4750.0093
GLY 4760.0068
VAL 4770.0073
HIE 4780.0072
ALA 4790.0063
GLY 4800.0100
THR 4810.0078
ASP 4820.0049
LEU 4830.0034
GLU 4840.0038
GLY 4850.0086
ASN 4860.0095
PHE 4870.0112
TYR 4880.0101
GLY 4890.0097
PRO 4900.0148
PHE 4910.0127
VAL 4920.0178
ASP 4930.0104
ARG 4940.0045
GLN 4950.0040
THR 4960.0079
ALA 4970.0106
GLN 4980.0105
ALA 4990.0122
ALA 5000.0089
GLY 5010.0141
THR 5020.0104
ASP 5030.0127
THR 5040.0186
THR 5050.0125
ILE 5060.0103
THR 5070.0087
VAL 5080.0067
ASN 5090.0047
VAL 5100.0046
LEU 5110.0047
ALA 5120.0037
TRP 5130.0033
LEU 5140.0029
TYR 5150.0024
ALA 5160.0029
ALA 5170.0039
VAL 5180.0042
ILE 5190.0042
ASN 5200.0040
GLY 5210.0090
ASP 5220.0090
ARG 5230.0074
TRP 5240.0074
PHE 5250.0059
LEU 5260.0016
ASN 5270.0018
ARG 5280.0054
PHE 5290.0150
THR 5300.0141
THR 5310.0151
THR 5320.0171
LEU 5330.0026
ASN 5340.0052
ASP 5350.0089
PHE 5360.0046
ASN 5370.0022
LEU 5380.0061
VAL 5390.0048
ALA 5400.0032
MET 5410.0056
LYS 5420.0060
TYR 5430.0127
ASN 5440.0142
TYR 5450.0105
GLU 5460.0103
PRO 5470.0106
LEU 5480.0083
THR 5490.0115
GLN 5500.0190
ASP 5510.0153
HIE 5520.0085
VAL 5530.0129
ASP 5540.0149
ILE 5550.0096
LEU 5560.0086
GLY 5570.0101
PRO 5580.0076
LEU 5590.0056
SER 5600.0087
ALA 5610.0140
GLN 5620.0083
THR 5630.0083
GLY 5640.0141
ILE 5650.0037
ALA 5660.0024
VAL 5670.0037
LEU 5680.0024
ASP 5690.0036
MET 5700.0008
CYS 5710.0025
ALA 5720.0050
SER 5730.0044
LEU 5740.0032
LYS 5750.0051
GLU 5760.0060
LEU 5770.0074
LEU 5780.0072
GLN 5790.0073
ASN 5800.0073
GLY 5810.0122
MET 5820.0125
ASN 5830.0126
GLY 5840.0128
ARG 5850.0092
THR 5860.0092
ILE 5870.0092
LEU 5880.0101
GLY 5890.0133
SER 5900.0093
ALA 5910.0077
LEU 5920.0051
LEU 5930.0034
GLU 5940.0044
ASP 5950.0069
GLU 5960.0077
PHE 5970.0053
THR 5980.0042
PRO 5990.0048
PHE 6000.0046
ASP 6010.0070
VAL 6020.0076
VAL 6030.0076
ARG 6040.0094
GLN 6050.0128
CYS 6060.0118
SER 6070.0132
GLY 6080.0160
VAL 6090.0176
THR 6100.0136
PHE 6110.0085
GLN 6120.0051

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.