CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  apo-dimer-test  ***

Normal Mode Analysis for ID 2601021904551024081

The following table indicates for every normal mode its frequency (black, normalized relative to the lowest mode frequency) and its collectivity (magenta). If a second structure was submitted, the cummulative overlap between the normal modes and the conformational change is computed (red). The corresponding amplitude (dq) is then also given (green). Click on the mode link to obtain a visualization of the mean square displacement <R2> of the C-alpha atoms associated to each mode.

[HELP on collectivity] [HELP on overlap]

<R2> frequency collectivity
mode 7 1.00 0.6171
mode 8 1.16 0.3439
mode 9 1.22 0.5430
mode 10 1.26 0.5896
mode 11 1.31 0.6619
mode 12 1.44 0.4288
mode 13 1.48 0.5629
mode 14 1.64 0.6371
mode 15 1.78 0.4848
mode 16 2.15 0.6064
mode 17 2.24 0.7000
mode 18 2.45 0.6883
mode 19 2.48 0.5672
mode 20 2.57 0.4729
mode 21 2.63 0.6407
mode 22 2.66 0.6775
mode 23 2.71 0.6518
mode 24 3.03 0.5229
mode 25 3.09 0.4572
mode 26 3.12 0.5176
mode 27 3.32 0.4665
mode 28 3.44 0.3851
mode 29 3.52 0.0530
mode 30 3.67 0.0669
mode 31 3.71 0.1673
mode 32 3.90 0.4937
mode 33 3.94 0.3007
mode 34 3.99 0.4948
mode 35 4.04 0.3660
mode 36 4.04 0.4133
mode 37 4.07 0.4741
mode 38 4.11 0.4195
mode 39 4.14 0.4367
mode 40 4.22 0.4657
mode 41 4.31 0.3165
mode 42 4.34 0.5064
mode 43 4.44 0.3840
mode 44 4.45 0.5038
mode 45 4.49 0.4818
mode 46 4.55 0.4108
mode 47 4.58 0.4554
mode 48 4.68 0.3488
mode 49 4.70 0.3512
mode 50 4.71 0.5137
mode 51 4.79 0.3245
mode 52 4.84 0.3535
mode 53 4.87 0.4232
mode 54 4.90 0.3082
mode 55 4.94 0.3863
mode 56 4.96 0.2623
mode 57 5.01 0.3852
mode 58 5.04 0.4516
mode 59 5.10 0.6216
mode 60 5.14 0.3063
mode 61 5.17 0.3940
mode 62 5.22 0.4215
mode 63 5.25 0.4555
mode 64 5.30 0.3919
mode 65 5.33 0.3225
mode 66 5.37 0.4107
mode 67 5.41 0.3974
mode 68 5.45 0.4504
mode 69 5.47 0.5101
mode 70 5.52 0.4883
mode 71 5.53 0.4522
mode 72 5.56 0.3861
mode 73 5.61 0.3790
mode 74 5.63 0.5123
mode 75 5.64 0.4252
mode 76 5.70 0.4820
mode 77 5.73 0.4359
mode 78 5.76 0.4009
mode 79 5.79 0.4719
mode 80 5.81 0.4398
mode 81 5.83 0.4872
mode 82 5.85 0.4146
mode 83 5.89 0.3293
mode 84 5.92 0.4716
mode 85 5.94 0.4284
mode 86 5.97 0.4947
mode 87 6.00 0.4247
mode 88 6.04 0.5114
mode 89 6.07 0.3815
mode 90 6.09 0.5045
mode 91 6.10 0.4657
mode 92 6.14 0.3414
mode 93 6.16 0.5153
mode 94 6.20 0.4174
mode 95 6.22 0.4011
mode 96 6.24 0.4219
mode 97 6.26 0.5234
mode 98 6.27 0.4461
mode 99 6.31 0.4653
mode 100 6.35 0.3709
mode 101 6.37 0.5177
mode 102 6.38 0.3614
mode 103 6.43 0.4124
mode 104 6.45 0.4547
mode 105 6.47 0.5017
mode 106 6.49 0.4628

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.