CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  TRANSFERASE 12-NOV-07 3BCE  ***

<R2> analysis for 2601120122081958017

---  normal mode 52  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0778
THR 6780.0672
ALA 6790.0412
PRO 6800.0140
ASN 6810.0119
GLN 6820.0424
ALA 6830.0131
GLN 6840.0105
LEU 6850.0114
ARG 6860.0095
ILE 6870.0137
LEU 6880.0111
LYS 6890.0119
GLU 6900.0102
THR 6910.0106
GLU 6920.0104
LEU 6930.0079
LYS 6940.0082
ARG 6950.0085
VAL 6960.0083
LYS 6970.0086
VAL 6980.0134
LEU 6990.0135
GLY 7000.0205
SER 7010.0253
GLY 7020.0322
ALA 7030.0229
PHE 7040.0191
GLY 7050.0147
THR 7060.0162
VAL 7070.0150
TYR 7080.0100
LYS 7090.0085
GLY 7100.0078
ILE 7110.0077
TRP 7120.0084
VAL 7130.0140
PRO 7140.0149
GLU 7150.0188
GLY 7160.0214
GLU 7170.0201
THR 7180.0219
VAL 7190.0176
LYS 7200.0133
ILE 7210.0100
PRO 7220.0089
VAL 7230.0085
ALA 7240.0093
ILE 7250.0079
LYS 7260.0083
ILE 7270.0077
LEU 7280.0102
ASN 7290.0238
GLU 7300.0488
THR 7310.0497
PRO 7340.0590
LYS 7350.0432
ALA 7360.0323
ASN 7370.0189
VAL 7380.0127
GLU 7390.0104
PHE 7400.0043
MET 7410.0028
ASP 7420.0091
GLU 7430.0109
ALA 7440.0056
LEU 7450.0063
ILE 7460.0059
MET 7470.0054
ALA 7480.0060
SER 7490.0054
MET 7500.0051
ASP 7510.0047
HIS 7520.0048
PRO 7530.0045
HIS 7540.0044
LEU 7550.0044
VAL 7560.0035
ARG 7570.0043
LEU 7580.0053
LEU 7590.0072
GLY 7600.0072
VAL 7610.0073
CYS 7620.0074
LEU 7630.0077
SER 7640.0037
PRO 7650.0051
THR 7660.0055
ILE 7670.0049
GLN 7680.0048
LEU 7690.0063
VAL 7700.0066
THR 7710.0065
GLN 7720.0067
LEU 7730.0064
MET 7740.0044
PRO 7750.0033
HIS 7760.0039
GLY 7770.0042
CYS 7780.0054
LEU 7790.0061
LEU 7800.0062
GLU 7810.0073
TYR 7820.0068
VAL 7830.0059
HIS 7840.0089
GLU 7850.0096
HIS 7860.0081
LYS 7870.0077
ASP 7880.0080
ASN 7890.0064
ILE 7900.0051
GLY 7910.0035
SER 7920.0031
GLN 7930.0024
LEU 7940.0036
LEU 7950.0040
LEU 7960.0032
ASN 7970.0034
TRP 7980.0043
CYS 7990.0037
VAL 8000.0040
GLN 8010.0040
ILE 8020.0037
ALA 8030.0036
LYS 8040.0037
GLY 8050.0030
MET 8060.0027
MET 8070.0037
TYR 8080.0041
LEU 8090.0030
GLU 8100.0015
GLU 8110.0020
ARG 8120.0032
ARG 8130.0028
LEU 8140.0032
VAL 8150.0023
HIS 8160.0020
ARG 8170.0018
ASP 8180.0012
LEU 8190.0026
ALA 8200.0025
ALA 8210.0035
ARG 8220.0035
ASN 8230.0038
VAL 8240.0045
LEU 8250.0044
VAL 8260.0048
LYS 8270.0050
SER 8280.0054
PRO 8290.0048
ASN 8300.0052
HIS 8310.0049
VAL 8320.0047
LYS 8330.0047
ILE 8340.0028
THR 8350.0026
ASP 8360.0020
PHE 8370.0018
GLY 8380.0014
LEU 8390.0019
ALA 8400.0019
ARG 8410.0025
LEU 8420.0030
LEU 8430.0030
GLU 8440.0181
GLY 8450.0154
ASP 8460.0089
GLU 8470.0003
LYS 8480.0068
GLU 8490.0044
TYR 8500.0050
ASN 8510.0059
ALA 8520.0071
GLY 8550.0067
LYS 8560.0058
MET 8570.0048
PRO 8580.0050
ILE 8590.0059
LYS 8600.0042
TRP 8610.0025
MET 8620.0040
ALA 8630.0044
LEU 8640.0064
GLU 8650.0063
CYS 8660.0068
ILE 8670.0082
HIS 8680.0095
TYR 8690.0096
ARG 8700.0068
LYS 8710.0055
PHE 8720.0048
THR 8730.0040
HIS 8740.0033
GLN 8750.0031
SER 8760.0029
ASP 8770.0029
VAL 8780.0026
TRP 8790.0021
SER 8800.0024
TYR 8810.0029
GLY 8820.0024
VAL 8830.0022
THR 8840.0029
ILE 8850.0035
TRP 8860.0032
GLU 8870.0037
LEU 8880.0041
MET 8890.0038
THR 8900.0046
PHE 8910.0058
GLY 8920.0057
GLY 8930.0048
LYS 8940.0044
PRO 8950.0034
TYR 8960.0069
ASP 8970.0086
GLY 8980.0125
ILE 8990.0130
PRO 9000.0127
THR 9010.0120
ARG 9020.0122
GLU 9030.0117
ILE 9040.0109
PRO 9050.0112
ASP 9060.0127
LEU 9070.0114
LEU 9080.0089
GLU 9090.0102
LYS 9100.0120
GLY 9110.0086
GLU 9120.0079
ARG 9130.0046
LEU 9140.0041
PRO 9150.0042
GLN 9160.0039
PRO 9170.0049
PRO 9180.0051
ILE 9190.0051
CYS 9200.0053
THR 9210.0052
ILE 9220.0053
ASP 9230.0042
VAL 9240.0041
TYR 9250.0034
MET 9260.0032
VAL 9270.0033
MET 9280.0036
VAL 9290.0035
LYS 9300.0030
CYS 9310.0032
TRP 9320.0025
MET 9330.0026
ILE 9340.0034
ASP 9350.0029
ALA 9360.0032
ASP 9370.0035
SER 9380.0030
ARG 9390.0030
PRO 9400.0035
LYS 9410.0035
PHE 9420.0033
LYS 9430.0041
GLU 9440.0043
LEU 9450.0037
ALA 9460.0033
ALA 9470.0031
GLU 9480.0034
PHE 9490.0034
SER 9500.0015
ARG 9510.0028
MET 9520.0041
ALA 9530.0034
ARG 9540.0051
ASP 9550.0066
PRO 9560.0056
GLN 9570.0089
ARG 9580.0089
TYR 9590.0074
LEU 9600.0048
VAL 9610.0103
ILE 9620.0133
GLN 9630.0188
GLY 9640.0198
ASP 9650.0175
ASP 9660.0349
THR 6780.0492
ALA 6790.0320
PRO 6800.0088
ASN 6810.0122
GLN 6820.0296
ALA 6830.0152
GLN 6840.0152
LEU 6850.0144
ARG 6860.0153
ILE 6870.0142
LEU 6880.0135
LYS 6890.0133
GLU 6900.0095
THR 6910.0125
GLU 6920.0086
LEU 6930.0081
LYS 6940.0117
ARG 6950.0126
VAL 6960.0196
LYS 6970.0217
VAL 6980.0174
LEU 6990.0241
GLY 7000.0229
SER 7010.0178
GLY 7020.0206
ALA 7030.0237
PHE 7040.0243
GLY 7050.0181
THR 7060.0134
VAL 7070.0144
TYR 7080.0132
LYS 7090.0160
GLY 7100.0120
ILE 7110.0105
TRP 7120.0081
VAL 7130.0080
PRO 7140.0159
GLU 7150.0241
GLY 7160.0285
GLU 7170.0193
THR 7180.0108
VAL 7190.0087
LYS 7200.0110
ILE 7210.0125
PRO 7220.0169
VAL 7230.0118
ALA 7240.0112
ILE 7250.0105
LYS 7260.0108
ILE 7270.0112
LEU 7280.0187
ASN 7290.0210
GLU 7300.0523
THR 7310.0505
LYS 7350.0778
ALA 7360.0516
ASN 7370.0221
VAL 7380.0433
GLU 7390.0303
PHE 7400.0037
MET 7410.0055
ASP 7420.0052
GLU 7430.0039
ALA 7440.0092
LEU 7450.0041
ILE 7460.0044
MET 7470.0057
ALA 7480.0065
SER 7490.0067
MET 7500.0020
ASP 7510.0007
HIS 7520.0018
PRO 7530.0020
HIS 7540.0031
LEU 7550.0049
VAL 7560.0062
ARG 7570.0057
LEU 7580.0075
LEU 7590.0091
GLY 7600.0111
VAL 7610.0101
CYS 7620.0085
LEU 7630.0081
SER 7640.0064
PRO 7650.0064
THR 7660.0068
ILE 7670.0081
GLN 7680.0093
LEU 7690.0110
VAL 7700.0098
THR 7710.0090
GLN 7720.0098
LEU 7730.0101
MET 7740.0096
PRO 7750.0063
HIS 7760.0045
GLY 7770.0023
CYS 7780.0021
LEU 7790.0025
LEU 7800.0048
GLU 7810.0052
TYR 7820.0037
VAL 7830.0040
HIS 7840.0061
GLU 7850.0074
HIS 7860.0072
LYS 7870.0073
ASP 7880.0094
ASN 7890.0089
ILE 7900.0055
GLY 7910.0063
SER 7920.0069
GLN 7930.0056
LEU 7940.0041
LEU 7950.0020
LEU 7960.0014
ASN 7970.0022
TRP 7980.0024
CYS 7990.0029
VAL 8000.0039
GLN 8010.0043
ILE 8020.0052
ALA 8030.0057
LYS 8040.0063
GLY 8050.0057
MET 8060.0060
MET 8070.0061
TYR 8080.0055
LEU 8090.0053
GLU 8100.0065
GLU 8110.0071
ARG 8120.0056
ARG 8130.0051
LEU 8140.0041
VAL 8150.0052
HIS 8160.0054
ARG 8170.0047
ASP 8180.0054
LEU 8190.0065
ALA 8200.0057
ALA 8210.0047
ARG 8220.0047
ASN 8230.0049
VAL 8240.0043
LEU 8250.0009
VAL 8260.0017
LYS 8270.0034
SER 8280.0040
PRO 8290.0032
ASN 8300.0027
HIS 8310.0024
VAL 8320.0012
LYS 8330.0017
ILE 8340.0032
THR 8350.0032
ASP 8360.0030
PHE 8370.0031
GLY 8380.0034
LEU 8390.0033
ALA 8400.0038
ARG 8410.0041
LEU 8420.0068
LEU 8430.0074
GLU 8440.0101
GLY 8450.0177
ASP 8460.0167
GLU 8470.0108
LYS 8480.0085
GLU 8490.0044
TYR 8500.0034
ASN 8510.0043
ALA 8520.0048
GLY 8550.0032
LYS 8560.0040
MET 8570.0052
PRO 8580.0067
ILE 8590.0060
LYS 8600.0081
TRP 8610.0073
MET 8620.0053
ALA 8630.0049
LEU 8640.0051
GLU 8650.0048
CYS 8660.0047
ILE 8670.0057
HIS 8680.0060
TYR 8690.0051
ARG 8700.0048
LYS 8710.0041
PHE 8720.0041
THR 8730.0046
HIS 8740.0061
GLN 8750.0068
SER 8760.0068
ASP 8770.0071
VAL 8780.0071
TRP 8790.0070
SER 8800.0075
TYR 8810.0072
GLY 8820.0067
VAL 8830.0070
THR 8840.0074
ILE 8850.0053
TRP 8860.0051
GLU 8870.0059
LEU 8880.0049
MET 8890.0040
THR 8900.0048
PHE 8910.0044
GLY 8920.0071
GLY 8930.0084
LYS 8940.0110
PRO 8950.0121
TYR 8960.0136
ASP 8970.0181
GLY 8980.0229
ILE 8990.0191
PRO 9000.0269
THR 9010.0231
ARG 9020.0248
GLU 9030.0180
ILE 9040.0114
PRO 9050.0110
ASP 9060.0116
LEU 9070.0093
LEU 9080.0061
GLU 9090.0075
LYS 9100.0047
GLY 9110.0041
GLU 9120.0056
ARG 9130.0064
LEU 9140.0081
PRO 9150.0061
GLN 9160.0042
PRO 9170.0052
PRO 9180.0073
ILE 9190.0061
CYS 9200.0050
THR 9210.0061
ILE 9220.0052
ASP 9230.0043
VAL 9240.0019
TYR 9250.0016
MET 9260.0020
VAL 9270.0038
MET 9280.0044
VAL 9290.0048
LYS 9300.0061
CYS 9310.0068
TRP 9320.0068
MET 9330.0067
ILE 9340.0072
ASP 9350.0090
ALA 9360.0084
ASP 9370.0087
SER 9380.0086
ARG 9390.0077
PRO 9400.0079
LYS 9410.0082
PHE 9420.0071
LYS 9430.0072
GLU 9440.0071
LEU 9450.0057
ALA 9460.0063
ALA 9470.0067
GLU 9480.0044
PHE 9490.0031
SER 9500.0062
ARG 9510.0076
MET 9520.0058
ALA 9530.0057
ARG 9540.0095
ASP 9550.0095
PRO 9560.0077
GLN 9570.0101
ARG 9580.0103
TYR 9590.0079
LEU 9600.0073
VAL 9610.0103
ILE 9620.0096
GLN 9630.0125
GLY 9640.0125
ASP 9650.0083
ASP 9660.0100
ARG 9670.0112
MET 9680.0100
THR 6780.0081
ALA 6790.0075
PRO 6800.0060
ASN 6810.0063
GLN 6820.0065
ALA 6830.0076
GLN 6840.0085
LEU 6850.0072
ARG 6860.0085
ILE 6870.0092
LEU 6880.0107
LYS 6890.0143
GLU 6900.0141
THR 6910.0128
GLU 6920.0074
LEU 6930.0059
LYS 6940.0094
ARG 6950.0106
VAL 6960.0127
LYS 6970.0130
VAL 6980.0107
LEU 6990.0049
GLY 7000.0151
SER 7010.0240
GLY 7020.0347
ALA 7030.0305
PHE 7040.0245
GLY 7050.0184
THR 7060.0137
VAL 7070.0079
TYR 7080.0046
LYS 7090.0053
GLY 7100.0058
ILE 7110.0061
TRP 7120.0024
VAL 7130.0023
PRO 7140.0121
GLU 7150.0183
GLY 7160.0211
GLU 7170.0155
THR 7180.0101
VAL 7190.0138
LYS 7200.0112
ILE 7210.0098
PRO 7220.0102
VAL 7230.0028
ALA 7240.0014
ILE 7250.0023
LYS 7260.0048
ILE 7270.0065
LEU 7280.0072
ASN 7290.0188
GLU 7300.0281
THR 7310.0260
THR 7320.0129
GLY 7330.0167
PRO 7340.0211
LYS 7350.0184
ALA 7360.0109
ASN 7370.0077
VAL 7380.0078
GLU 7390.0082
PHE 7400.0050
MET 7410.0067
ASP 7420.0098
GLU 7430.0052
ALA 7440.0055
LEU 7450.0052
ILE 7460.0049
MET 7470.0052
ALA 7480.0051
SER 7490.0036
MET 7500.0042
ASP 7510.0058
HIS 7520.0064
PRO 7530.0051
HIS 7540.0050
LEU 7550.0044
VAL 7560.0046
ARG 7570.0044
LEU 7580.0019
LEU 7590.0020
GLY 7600.0031
VAL 7610.0048
CYS 7620.0069
LEU 7630.0072
SER 7640.0089
PRO 7650.0092
THR 7660.0067
ILE 7670.0045
GLN 7680.0051
LEU 7690.0031
VAL 7700.0020
THR 7710.0013
GLN 7720.0029
LEU 7730.0043
MET 7740.0037
PRO 7750.0036
HIS 7760.0042
GLY 7770.0050
CYS 7780.0057
LEU 7790.0040
LEU 7800.0060
GLU 7810.0073
TYR 7820.0054
VAL 7830.0064
HIS 7840.0113
GLU 7850.0137
HIS 7860.0119
LYS 7870.0109
ASP 7880.0149
ASN 7890.0141
ILE 7900.0089
GLY 7910.0079
SER 7920.0058
GLN 7930.0062
LEU 7940.0046
LEU 7950.0011
LEU 7960.0033
ASN 7970.0031
TRP 7980.0019
CYS 7990.0032
VAL 8000.0032
GLN 8010.0027
ILE 8020.0045
ALA 8030.0051
LYS 8040.0055
GLY 8050.0059
MET 8060.0061
MET 8070.0064
TYR 8080.0066
LEU 8090.0058
GLU 8100.0058
GLU 8110.0064
ARG 8120.0059
ARG 8130.0073
LEU 8140.0055
VAL 8150.0038
HIS 8160.0043
ARG 8170.0024
ASP 8180.0056
LEU 8190.0059
ALA 8200.0055
ALA 8210.0061
ARG 8220.0063
ASN 8230.0059
VAL 8240.0048
LEU 8250.0041
VAL 8260.0028
LYS 8270.0023
SER 8280.0021
PRO 8290.0022
ASN 8300.0015
HIS 8310.0018
VAL 8320.0033
LYS 8330.0051
ILE 8340.0044
THR 8350.0043
ASP 8360.0039
PHE 8370.0036
GLY 8380.0070
LEU 8390.0048
ALA 8400.0038
ARG 8410.0022
LEU 8420.0028
LEU 8430.0049
GLU 8440.0052
ASP 8460.0164
GLU 8470.0140
LYS 8480.0130
GLU 8490.0093
TYR 8500.0067
ASN 8510.0088
ALA 8520.0091
ASP 8530.0097
GLY 8550.0098
LYS 8560.0096
MET 8570.0065
PRO 8580.0066
ILE 8590.0044
LYS 8600.0025
TRP 8610.0033
MET 8620.0019
ALA 8630.0020
LEU 8640.0032
GLU 8650.0058
CYS 8660.0035
ILE 8670.0064
HIS 8680.0094
TYR 8690.0092
ARG 8700.0076
LYS 8710.0060
PHE 8720.0028
THR 8730.0044
HIS 8740.0064
GLN 8750.0056
SER 8760.0040
ASP 8770.0049
VAL 8780.0057
TRP 8790.0045
SER 8800.0057
TYR 8810.0060
GLY 8820.0059
VAL 8830.0058
THR 8840.0062
ILE 8850.0058
TRP 8860.0062
GLU 8870.0061
LEU 8880.0051
MET 8890.0049
THR 8900.0047
PHE 8910.0050
GLY 8920.0064
GLY 8930.0055
LYS 8940.0067
PRO 8950.0047
TYR 8960.0006
ASP 8970.0023
GLY 8980.0053
ILE 8990.0065
PRO 9000.0119
THR 9010.0104
ARG 9020.0118
GLU 9030.0115
ILE 9040.0092
PRO 9050.0093
ASP 9060.0120
LEU 9070.0090
LEU 9080.0073
GLU 9090.0113
LYS 9100.0121
GLY 9110.0096
GLU 9120.0063
ARG 9130.0036
LEU 9140.0048
PRO 9150.0107
GLN 9160.0094
PRO 9170.0079
PRO 9180.0084
ILE 9190.0060
CYS 9200.0075
THR 9210.0106
ILE 9220.0139
ASP 9230.0127
VAL 9240.0088
TYR 9250.0080
MET 9260.0076
VAL 9270.0066
MET 9280.0068
VAL 9290.0074
LYS 9300.0063
CYS 9310.0055
TRP 9320.0045
MET 9330.0048
ILE 9340.0050
ASP 9350.0063
ALA 9360.0057
ASP 9370.0072
SER 9380.0075
ARG 9390.0065
PRO 9400.0064
LYS 9410.0069
PHE 9420.0068
LYS 9430.0076
GLU 9440.0072
LEU 9450.0071
ALA 9460.0039
ALA 9470.0048
GLU 9480.0072
PHE 9490.0050
SER 9500.0078
ARG 9510.0132
MET 9520.0110
ALA 9530.0092
ARG 9540.0153
ASP 9550.0170
PRO 9560.0113
GLN 9570.0112
ARG 9580.0146
TYR 9590.0112
LEU 9600.0066
VAL 9610.0033
ILE 9620.0045
GLN 9630.0093
GLY 9640.0151
ASP 9650.0143

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.