CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  TRANSFERASE 12-NOV-07 3BCE  ***

Normal Mode Analysis for ID 2601120122081958017

The following table indicates for every normal mode its frequency (black, normalized relative to the lowest mode frequency) and its collectivity (magenta). If a second structure was submitted, the cummulative overlap between the normal modes and the conformational change is computed (red). The corresponding amplitude (dq) is then also given (green). Click on the mode link to obtain a visualization of the mean square displacement <R2> of the C-alpha atoms associated to each mode.

[HELP on collectivity] [HELP on overlap]

<R2> frequency collectivity
mode 7 1.00 0.6102
mode 8 1.22 0.5385
mode 9 1.68 0.5872
mode 10 2.76 0.7146
mode 11 2.92 0.6642
mode 12 3.68 0.6852
mode 13 6.43 0.7156
mode 14 6.89 0.5709
mode 15 7.83 0.6021
mode 16 9.24 0.5213
mode 17 11.66 0.3491
mode 18 11.74 0.5951
mode 19 12.14 0.4174
mode 20 12.70 0.5227
mode 21 13.24 0.0217
mode 22 13.37 0.4268
mode 23 13.71 0.0259
mode 24 14.28 0.4899
mode 25 14.49 0.0194
mode 26 16.30 0.4937
mode 27 17.56 0.4347
mode 28 18.04 0.2125
mode 29 19.06 0.3076
mode 30 20.84 0.2071
mode 31 21.67 0.2879
mode 32 22.78 0.4548
mode 33 23.12 0.4646
mode 34 23.47 0.2635
mode 35 24.27 0.2921
mode 36 24.55 0.4552
mode 37 24.74 0.1889
mode 38 25.26 0.3297
mode 39 25.73 0.0894
mode 40 25.94 0.3346
mode 41 26.69 0.1399
mode 42 27.25 0.1840
mode 43 27.80 0.1030
mode 44 28.22 0.0693
mode 45 28.44 0.1682
mode 46 28.63 0.1674
mode 47 28.73 0.1793
mode 48 29.65 0.1232
mode 49 30.05 0.3296
mode 50 30.68 0.0675
mode 51 30.79 0.2811
mode 52 31.20 0.2215
mode 53 31.38 0.2043
mode 54 31.53 0.4026
mode 55 31.77 0.2960
mode 56 32.51 0.2502
mode 57 32.78 0.2925
mode 58 33.02 0.2420
mode 59 33.63 0.4156
mode 60 34.50 0.4496
mode 61 34.71 0.2832
mode 62 35.13 0.1407
mode 63 35.44 0.3748
mode 64 35.97 0.1096
mode 65 36.34 0.2884
mode 66 36.98 0.4764
mode 67 37.54 0.4548
mode 68 37.66 0.1554
mode 69 37.88 0.3027
mode 70 38.03 0.3419
mode 71 38.33 0.3389
mode 72 38.74 0.2473
mode 73 38.91 0.3331
mode 74 39.08 0.4044
mode 75 39.72 0.2897
mode 76 40.22 0.4127
mode 77 40.54 0.4942
mode 78 41.01 0.2421
mode 79 41.34 0.4225
mode 80 41.38 0.4200
mode 81 41.72 0.3238
mode 82 42.28 0.4201
mode 83 42.55 0.2556
mode 84 42.72 0.4077
mode 85 42.77 0.2108
mode 86 42.96 0.3900
mode 87 43.31 0.1433
mode 88 44.13 0.1980
mode 89 44.40 0.3188
mode 90 44.68 0.3589
mode 91 44.79 0.2152
mode 92 45.22 0.3496
mode 93 45.51 0.3189
mode 94 45.63 0.2195
mode 95 46.15 0.3710
mode 96 46.19 0.4721
mode 97 46.49 0.3516
mode 98 46.64 0.3498
mode 99 46.89 0.4354
mode 100 47.15 0.1472
mode 101 47.32 0.3855
mode 102 47.41 0.3573
mode 103 47.63 0.3919
mode 104 47.77 0.3726
mode 105 47.89 0.2974
mode 106 48.31 0.3643

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.