CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  d37  ***

Normal Mode Analysis for ID 2601131537342151601

The following table indicates for every normal mode its frequency (black, normalized relative to the lowest mode frequency) and its collectivity (magenta). If a second structure was submitted, the cummulative overlap between the normal modes and the conformational change is computed (red). The corresponding amplitude (dq) is then also given (green). Click on the mode link to obtain a visualization of the mean square displacement <R2> of the C-alpha atoms associated to each mode.

[HELP on collectivity] [HELP on overlap]

<R2> frequency collectivity
mode 7 1.00 0.6980
mode 8 1.06 0.6837
mode 9 1.60 0.6587
mode 10 2.20 0.5624
mode 11 2.49 0.5967
mode 12 3.30 0.5437
mode 13 4.05 0.5759
mode 14 4.70 0.6437
mode 15 5.74 0.5497
mode 16 6.59 0.6589
mode 17 7.10 0.3298
mode 18 8.26 0.5631
mode 19 8.99 0.4883
mode 20 10.22 0.5962
mode 21 10.95 0.7344
mode 22 11.42 0.5048
mode 23 12.29 0.5717
mode 24 12.89 0.3423
mode 25 13.44 0.5571
mode 26 13.71 0.6053
mode 27 14.02 0.6162
mode 28 14.62 0.4951
mode 29 15.06 0.4161
mode 30 15.26 0.4908
mode 31 15.42 0.5396
mode 32 15.82 0.6403
mode 33 15.87 0.5187
mode 34 16.54 0.4987
mode 35 16.83 0.4433
mode 36 17.24 0.6481
mode 37 17.75 0.6765
mode 38 17.84 0.5275
mode 39 18.77 0.6204
mode 40 18.87 0.5710
mode 41 19.19 0.6052
mode 42 19.36 0.5675
mode 43 20.14 0.5557
mode 44 20.50 0.6381
mode 45 20.92 0.4729
mode 46 21.15 0.6396
mode 47 21.42 0.5369
mode 48 22.10 0.5085
mode 49 22.20 0.6608
mode 50 22.59 0.4959
mode 51 22.81 0.6231
mode 52 23.40 0.4617
mode 53 23.59 0.6013
mode 54 23.72 0.5143
mode 55 23.94 0.5863
mode 56 24.52 0.5298
mode 57 24.73 0.4530
mode 58 24.82 0.3906
mode 59 24.86 0.5136
mode 60 25.86 0.6653
mode 61 26.08 0.5252
mode 62 26.32 0.5587
mode 63 26.79 0.6303
mode 64 27.61 0.6067
mode 65 27.79 0.6933
mode 66 28.24 0.5217
mode 67 28.43 0.6001
mode 68 28.52 0.6697
mode 69 28.74 0.6011
mode 70 29.69 0.4970
mode 71 29.87 0.4900
mode 72 30.19 0.6627
mode 73 30.31 0.6770
mode 74 30.93 0.6673
mode 75 31.07 0.5711
mode 76 31.46 0.4860
mode 77 31.98 0.6986
mode 78 32.36 0.5292
mode 79 32.74 0.6577
mode 80 32.85 0.6643
mode 81 33.02 0.7167
mode 82 33.46 0.7322
mode 83 34.19 0.6404
mode 84 34.29 0.6708
mode 85 34.99 0.6532
mode 86 35.20 0.7107
mode 87 35.50 0.5828
mode 88 35.59 0.5736
mode 89 35.72 0.6167
mode 90 36.03 0.5163
mode 91 36.19 0.5560
mode 92 36.52 0.6171
mode 93 36.68 0.5528
mode 94 36.81 0.5380
mode 95 36.98 0.5714
mode 96 37.28 0.6189
mode 97 37.35 0.5959
mode 98 37.54 0.6042
mode 99 37.90 0.6179
mode 100 37.96 0.6283
mode 101 38.19 0.4707
mode 102 38.40 0.6113
mode 103 38.67 0.6253
mode 104 38.84 0.5780
mode 105 39.04 0.4830
mode 106 39.09 0.6010

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.