CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  MEMBRANE PROTEIN 20-NOV-23 8X5Y  ***

<R2> analysis for 2601201921523260072

---  normal mode 18  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0659
THR 200.0397
THR 210.0262
MET 220.0215
ALA 230.0126
SER 240.0074
PRO 250.0137
GLN 260.0149
LEU 270.0095
MET 280.0150
PRO 290.0204
LEU 300.0112
VAL 310.0108
VAL 320.0176
VAL 330.0119
LEU 340.0073
SER 350.0114
THR 360.0082
ILE 370.0049
CYS 380.0064
LEU 390.0066
VAL 400.0027
THR 410.0044
VAL 420.0048
GLY 430.0039
LEU 440.0059
ASN 450.0063
LEU 460.0107
LEU 470.0108
VAL 480.0094
LEU 490.0097
TYR 500.0150
ALA 510.0119
VAL 520.0124
ARG 530.0173
SER 540.0189
GLU 550.0173
ARG 560.0267
LYS 570.0254
LEU 580.0161
HIS 590.0183
THR 600.0146
VAL 610.0123
GLY 620.0128
ASN 630.0112
LEU 640.0099
TYR 650.0098
ILE 660.0090
VAL 670.0085
SER 680.0058
LEU 690.0059
SER 700.0058
VAL 710.0052
ALA 720.0046
ASP 730.0046
LEU 740.0041
ILE 750.0054
VAL 760.0065
GLY 770.0057
ALA 780.0071
VAL 790.0090
VAL 800.0091
MET 810.0079
PRO 820.0095
MET 830.0104
ASN 840.0101
ILE 850.0096
LEU 860.0108
TYR 870.0111
LEU 880.0098
LEU 890.0114
MET 900.0139
SER 910.0163
LYS 920.0113
TRP 930.0096
SER 940.0074
LEU 950.0083
GLY 960.0063
ARG 970.0047
PRO 980.0088
LEU 990.0096
CYS 1000.0081
LEU 1010.0089
PHE 1020.0110
TRP 1030.0107
LEU 1040.0096
SER 1050.0112
MET 1060.0096
ASP 1070.0089
TYR 1080.0091
VAL 1090.0091
ALA 1100.0058
SER 1110.0055
THR 1120.0047
ALA 1130.0037
SER 1140.0035
ILE 1150.0036
PHE 1160.0052
SER 1170.0048
VAL 1180.0070
PHE 1190.0074
ILE 1200.0103
LEU 1210.0105
CYS 1220.0106
ILE 1230.0111
ASP 1240.0136
ARG 1250.0121
TYR 1260.0109
ARG 1270.0086
SER 1280.0075
VAL 1290.0071
GLN 1300.0042
GLN 1310.0108
PRO 1320.0130
LEU 1330.0233
ARG 1340.0210
TYR 1350.0096
LEU 1360.0066
LYS 1370.0110
TYR 1380.0132
ARG 1390.0100
THR 1400.0127
LYS 1410.0125
THR 1420.0149
ARG 1430.0149
ALA 1440.0121
SER 1450.0117
ALA 1460.0112
THR 1470.0100
ILE 1480.0071
LEU 1490.0065
GLY 1500.0050
ALA 1510.0049
TRP 1520.0053
PHE 1530.0075
LEU 1540.0073
SER 1550.0071
PHE 1560.0107
LEU 1570.0108
TRP 1580.0123
VAL 1590.0138
ILE 1600.0183
PRO 1610.0162
ILE 1620.0105
LEU 1630.0100
GLY 1640.0193
TRP 1650.0212
ASN 1660.0303
HIS 1670.0378
PHE 1680.0459
MET 1690.0502
GLN 1700.0659
GLN 1710.0511
VAL 1740.0125
ARG 1750.0184
ARG 1760.0055
GLU 1770.0033
ASP 1780.0053
LYS 1790.0077
CYS 1800.0051
GLU 1810.0073
THR 1820.0055
ASP 1830.0087
PHE 1840.0105
TYR 1850.0074
ASP 1860.0089
VAL 1870.0124
THR 1880.0105
TRP 1890.0144
PHE 1900.0149
LYS 1910.0118
VAL 1920.0102
MET 1930.0112
THR 1940.0104
ALA 1950.0093
ILE 1960.0069
ILE 1970.0057
ASN 1980.0051
PHE 1990.0049
TYR 2000.0037
LEU 2010.0028
PRO 2020.0027
THR 2030.0021
LEU 2040.0034
LEU 2050.0057
MET 2060.0060
LEU 2070.0053
TRP 2080.0073
PHE 2090.0085
TYR 2100.0080
ALA 2110.0070
LYS 2120.0080
ILE 2130.0088
TYR 2140.0075
LYS 2150.0064
ALA 2160.0071
VAL 2170.0096
LYS 2180.0102
ARG 2190.0099
GLN 2200.0127
LEU 2210.0188
ASN 4080.0238
ARG 4090.0225
GLU 4100.0169
ARG 4110.0141
LYS 4120.0127
ALA 4130.0140
ALA 4140.0107
LYS 4150.0092
GLN 4160.0100
LEU 4170.0097
GLY 4180.0087
PHE 4190.0082
ILE 4200.0076
MET 4210.0071
ALA 4220.0056
ALA 4230.0047
PHE 4240.0034
ILE 4250.0032
LEU 4260.0049
CYS 4270.0048
TRP 4280.0057
ILE 4290.0064
PRO 4300.0073
TYR 4310.0067
PHE 4320.0068
ILE 4330.0076
PHE 4340.0067
PHE 4350.0068
MET 4360.0083
VAL 4370.0092
ILE 4380.0070
ALA 4390.0084
PHE 4400.0147
CYS 4410.0162
LYS 4420.0205
ASN 4430.0330
CYS 4440.0177
CYS 4450.0143
ASN 4460.0058
GLU 4470.0073
HIS 4480.0074
LEU 4490.0067
HIS 4500.0062
MET 4510.0070
PHE 4520.0073
THR 4530.0071
ILE 4540.0066
TRP 4550.0060
LEU 4560.0062
GLY 4570.0061
TYR 4580.0059
ILE 4590.0045
ASN 4600.0052
SER 4610.0056
THR 4620.0055
LEU 4630.0059
ASN 4640.0079
PRO 4650.0078
LEU 4660.0086
ILE 4670.0095
TYR 4680.0110
PRO 4690.0128
LEU 4700.0128
CYS 4710.0112
ASN 4720.0140
GLU 4730.0202
ASN 4740.0159
PHE 4750.0139
LYS 4760.0210
LYS 4770.0215
THR 4780.0133
PHE 4790.0182
LYS 4800.0330
ARG 4810.0322

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.