CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  MEMBRANE PROTEIN 20-NOV-23 8X5Y  ***

<R2> analysis for 2601201921523260072

---  normal mode 19  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0807
THR 200.0295
THR 210.0161
MET 220.0161
ALA 230.0155
SER 240.0227
PRO 250.0191
GLN 260.0150
LEU 270.0126
MET 280.0094
PRO 290.0076
LEU 300.0079
VAL 310.0078
VAL 320.0095
VAL 330.0101
LEU 340.0076
SER 350.0086
THR 360.0102
ILE 370.0077
CYS 380.0071
LEU 390.0094
VAL 400.0087
THR 410.0058
VAL 420.0071
GLY 430.0084
LEU 440.0056
ASN 450.0044
LEU 460.0067
LEU 470.0059
VAL 480.0033
LEU 490.0043
TYR 500.0074
ALA 510.0048
VAL 520.0054
ARG 530.0090
SER 540.0116
GLU 550.0114
ARG 560.0169
LYS 570.0151
LEU 580.0073
HIS 590.0073
THR 600.0056
VAL 610.0079
GLY 620.0065
ASN 630.0045
LEU 640.0059
TYR 650.0061
ILE 660.0032
VAL 670.0019
SER 680.0031
LEU 690.0029
SER 700.0011
VAL 710.0021
ALA 720.0024
ASP 730.0016
LEU 740.0042
ILE 750.0046
VAL 760.0042
GLY 770.0045
ALA 780.0065
VAL 790.0072
VAL 800.0070
MET 810.0060
PRO 820.0083
MET 830.0092
ASN 840.0092
ILE 850.0084
LEU 860.0114
TYR 870.0114
LEU 880.0113
LEU 890.0116
MET 900.0134
SER 910.0113
LYS 920.0121
TRP 930.0116
SER 940.0137
LEU 950.0124
GLY 960.0090
ARG 970.0085
PRO 980.0103
LEU 990.0098
CYS 1000.0081
LEU 1010.0082
PHE 1020.0090
TRP 1030.0087
LEU 1040.0076
SER 1050.0085
MET 1060.0076
ASP 1070.0063
TYR 1080.0066
VAL 1090.0075
ALA 1100.0055
SER 1110.0047
THR 1120.0061
ALA 1130.0060
SER 1140.0045
ILE 1150.0058
PHE 1160.0063
SER 1170.0055
VAL 1180.0055
PHE 1190.0067
ILE 1200.0062
LEU 1210.0062
CYS 1220.0076
ILE 1230.0086
ASP 1240.0105
ARG 1250.0097
TYR 1260.0088
ARG 1270.0087
SER 1280.0121
VAL 1290.0109
GLN 1300.0073
GLN 1310.0168
PRO 1320.0223
LEU 1330.0286
ARG 1340.0210
TYR 1350.0166
LEU 1360.0221
LYS 1370.0222
TYR 1380.0151
ARG 1390.0166
THR 1400.0150
LYS 1410.0139
THR 1420.0162
ARG 1430.0138
ALA 1440.0101
SER 1450.0120
ALA 1460.0100
THR 1470.0064
ILE 1480.0056
LEU 1490.0074
GLY 1500.0065
ALA 1510.0066
TRP 1520.0076
PHE 1530.0099
LEU 1540.0106
SER 1550.0090
PHE 1560.0098
LEU 1570.0114
TRP 1580.0086
VAL 1590.0095
ILE 1600.0109
PRO 1610.0056
ILE 1620.0070
LEU 1630.0120
GLY 1640.0186
TRP 1650.0140
ASN 1660.0355
HIS 1670.0521
PHE 1680.0317
MET 1690.0396
GLN 1700.0807
GLN 1710.0556
VAL 1740.0111
ARG 1750.0248
ARG 1760.0206
GLU 1770.0169
ASP 1780.0179
LYS 1790.0149
CYS 1800.0096
GLU 1810.0096
THR 1820.0060
ASP 1830.0045
PHE 1840.0025
TYR 1850.0038
ASP 1860.0064
VAL 1870.0101
THR 1880.0082
TRP 1890.0131
PHE 1900.0088
LYS 1910.0073
VAL 1920.0082
MET 1930.0089
THR 1940.0072
ALA 1950.0073
ILE 1960.0083
ILE 1970.0078
ASN 1980.0075
PHE 1990.0066
TYR 2000.0076
LEU 2010.0075
PRO 2020.0075
THR 2030.0070
LEU 2040.0080
LEU 2050.0080
MET 2060.0075
LEU 2070.0074
TRP 2080.0075
PHE 2090.0075
TYR 2100.0089
ALA 2110.0111
LYS 2120.0099
ILE 2130.0103
TYR 2140.0152
LYS 2150.0240
ALA 2160.0195
VAL 2170.0117
LYS 2180.0171
ARG 2190.0223
GLN 2200.0189
LEU 2210.0146
ASN 4080.0264
ARG 4090.0223
GLU 4100.0134
ARG 4110.0124
LYS 4120.0110
ALA 4130.0085
ALA 4140.0066
LYS 4150.0066
GLN 4160.0038
LEU 4170.0056
GLY 4180.0053
PHE 4190.0057
ILE 4200.0045
MET 4210.0054
ALA 4220.0050
ALA 4230.0045
PHE 4240.0039
ILE 4250.0043
LEU 4260.0041
CYS 4270.0037
TRP 4280.0040
ILE 4290.0040
PRO 4300.0062
TYR 4310.0058
PHE 4320.0052
ILE 4330.0059
PHE 4340.0083
PHE 4350.0061
MET 4360.0050
VAL 4370.0067
ILE 4380.0061
ALA 4390.0041
PHE 4400.0038
CYS 4410.0086
LYS 4420.0163
ASN 4430.0239
CYS 4440.0249
CYS 4450.0282
ASN 4460.0310
GLU 4470.0293
HIS 4480.0278
LEU 4490.0213
HIS 4500.0133
MET 4510.0119
PHE 4520.0109
THR 4530.0085
ILE 4540.0068
TRP 4550.0055
LEU 4560.0056
GLY 4570.0039
TYR 4580.0036
ILE 4590.0040
ASN 4600.0030
SER 4610.0022
THR 4620.0035
LEU 4630.0043
ASN 4640.0033
PRO 4650.0029
LEU 4660.0044
ILE 4670.0042
TYR 4680.0040
PRO 4690.0045
LEU 4700.0043
CYS 4710.0042
ASN 4720.0053
GLU 4730.0074
ASN 4740.0066
PHE 4750.0042
LYS 4760.0062
LYS 4770.0058
THR 4780.0031
PHE 4790.0040
LYS 4800.0063
ARG 4810.0056

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.