CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  MEMBRANE PROTEIN 20-NOV-23 8X5Y  ***

<R2> analysis for 2601201921523260072

---  normal mode 56  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0346
THR 200.0304
THR 210.0258
MET 220.0241
ALA 230.0186
SER 240.0182
PRO 250.0156
GLN 260.0172
LEU 270.0093
MET 280.0110
PRO 290.0205
LEU 300.0187
VAL 310.0137
VAL 320.0129
VAL 330.0157
LEU 340.0085
SER 350.0071
THR 360.0108
ILE 370.0092
CYS 380.0058
LEU 390.0113
VAL 400.0094
THR 410.0076
VAL 420.0064
GLY 430.0076
LEU 440.0074
ASN 450.0071
LEU 460.0060
LEU 470.0070
VAL 480.0059
LEU 490.0036
TYR 500.0067
ALA 510.0093
VAL 520.0050
ARG 530.0068
SER 540.0095
GLU 550.0066
ARG 560.0114
LYS 570.0021
LEU 580.0066
HIS 590.0079
THR 600.0138
VAL 610.0109
GLY 620.0037
ASN 630.0027
LEU 640.0038
TYR 650.0040
ILE 660.0045
VAL 670.0044
SER 680.0069
LEU 690.0069
SER 700.0078
VAL 710.0070
ALA 720.0070
ASP 730.0069
LEU 740.0061
ILE 750.0057
VAL 760.0050
GLY 770.0054
ALA 780.0050
VAL 790.0062
VAL 800.0030
MET 810.0032
PRO 820.0071
MET 830.0082
ASN 840.0044
ILE 850.0055
LEU 860.0115
TYR 870.0103
LEU 880.0118
LEU 890.0127
MET 900.0163
SER 910.0150
LYS 920.0069
TRP 930.0020
SER 940.0088
LEU 950.0034
GLY 960.0250
ARG 970.0225
PRO 980.0296
LEU 990.0263
CYS 1000.0159
LEU 1010.0149
PHE 1020.0127
TRP 1030.0119
LEU 1040.0114
SER 1050.0113
MET 1060.0108
ASP 1070.0104
TYR 1080.0114
VAL 1090.0124
ALA 1100.0075
SER 1110.0069
THR 1120.0055
ALA 1130.0059
SER 1140.0055
ILE 1150.0044
PHE 1160.0061
SER 1170.0085
VAL 1180.0074
PHE 1190.0071
ILE 1200.0088
LEU 1210.0069
CYS 1220.0060
ILE 1230.0064
ASP 1240.0055
ARG 1250.0041
TYR 1260.0108
ARG 1270.0144
SER 1280.0127
VAL 1290.0127
GLN 1300.0272
GLN 1310.0191
PRO 1320.0220
LEU 1330.0198
ARG 1340.0160
TYR 1350.0151
LEU 1360.0119
LYS 1370.0305
TYR 1380.0153
ARG 1390.0147
THR 1400.0192
LYS 1410.0141
THR 1420.0187
ARG 1430.0143
ALA 1440.0084
SER 1450.0150
ALA 1460.0240
THR 1470.0223
ILE 1480.0145
LEU 1490.0211
GLY 1500.0222
ALA 1510.0111
TRP 1520.0097
PHE 1530.0143
LEU 1540.0068
SER 1550.0109
PHE 1560.0192
LEU 1570.0239
TRP 1580.0149
VAL 1590.0136
ILE 1600.0115
PRO 1610.0130
ILE 1620.0091
LEU 1630.0077
GLY 1640.0077
TRP 1650.0091
ASN 1660.0104
HIS 1670.0162
PHE 1680.0095
MET 1690.0114
GLN 1700.0148
GLN 1710.0146
VAL 1740.0187
ARG 1750.0177
ARG 1760.0203
GLU 1770.0153
ASP 1780.0115
LYS 1790.0098
CYS 1800.0113
GLU 1810.0121
THR 1820.0047
ASP 1830.0035
PHE 1840.0074
TYR 1850.0072
ASP 1860.0143
VAL 1870.0119
THR 1880.0136
TRP 1890.0137
PHE 1900.0059
LYS 1910.0050
VAL 1920.0070
MET 1930.0118
THR 1940.0101
ALA 1950.0081
ILE 1960.0058
ILE 1970.0093
ASN 1980.0075
PHE 1990.0061
TYR 2000.0040
LEU 2010.0049
PRO 2020.0030
THR 2030.0039
LEU 2040.0062
LEU 2050.0061
MET 2060.0057
LEU 2070.0072
TRP 2080.0124
PHE 2090.0100
TYR 2100.0121
ALA 2110.0141
LYS 2120.0171
ILE 2130.0147
TYR 2140.0137
LYS 2150.0124
ALA 2160.0153
VAL 2170.0121
LYS 2180.0119
ARG 2190.0230
GLN 2200.0178
LEU 2210.0140
ASN 4080.0139
ARG 4090.0115
GLU 4100.0085
ARG 4110.0071
LYS 4120.0068
ALA 4130.0086
ALA 4140.0098
LYS 4150.0115
GLN 4160.0061
LEU 4170.0063
GLY 4180.0065
PHE 4190.0063
ILE 4200.0070
MET 4210.0063
ALA 4220.0056
ALA 4230.0057
PHE 4240.0042
ILE 4250.0041
LEU 4260.0090
CYS 4270.0067
TRP 4280.0068
ILE 4290.0089
PRO 4300.0108
TYR 4310.0104
PHE 4320.0098
ILE 4330.0098
PHE 4340.0085
PHE 4350.0088
MET 4360.0028
VAL 4370.0049
ILE 4380.0024
ALA 4390.0096
PHE 4400.0215
CYS 4410.0214
LYS 4420.0239
ASN 4430.0319
CYS 4440.0098
CYS 4450.0224
ASN 4460.0212
GLU 4470.0147
HIS 4480.0346
LEU 4490.0213
HIS 4500.0095
MET 4510.0131
PHE 4520.0158
THR 4530.0098
ILE 4540.0072
TRP 4550.0073
LEU 4560.0085
GLY 4570.0069
TYR 4580.0067
ILE 4590.0091
ASN 4600.0076
SER 4610.0080
THR 4620.0088
LEU 4630.0082
ASN 4640.0075
PRO 4650.0062
LEU 4660.0038
ILE 4670.0036
TYR 4680.0031
PRO 4690.0036
LEU 4700.0063
CYS 4710.0056
ASN 4720.0029
GLU 4730.0043
ASN 4740.0050
PHE 4750.0057
LYS 4760.0060
LYS 4770.0063
THR 4780.0088
PHE 4790.0079
LYS 4800.0066
ARG 4810.0115

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.