CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  MEMBRANE PROTEIN 20-NOV-23 8X5Y  ***

CA strain for 2601201921523260072

---  normal mode 8  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
THR 20THR 21 -0.0000
THR 21MET 22 0.0093
MET 22ALA 23 -0.0000
ALA 23SER 24 0.0114
SER 24PRO 25 0.0002
PRO 25GLN 26 -0.0130
GLN 26LEU 27 -0.0000
LEU 27MET 28 0.0310
MET 28PRO 29 -0.0002
PRO 29LEU 30 -0.0402
LEU 30VAL 31 -0.0003
VAL 31VAL 32 -0.0468
VAL 32VAL 33 -0.0002
VAL 33LEU 34 -0.0153
LEU 34SER 35 -0.0000
SER 35THR 36 -0.0046
THR 36ILE 37 0.0000
ILE 37CYS 38 -0.0218
CYS 38LEU 39 0.0002
LEU 39VAL 40 -0.0073
VAL 40THR 41 -0.0000
THR 41VAL 42 0.0017
VAL 42GLY 43 -0.0005
GLY 43LEU 44 -0.0229
LEU 44ASN 45 -0.0003
ASN 45LEU 46 -0.0019
LEU 46LEU 47 0.0001
LEU 47VAL 48 0.0064
VAL 48LEU 49 0.0002
LEU 49TYR 50 -0.0600
TYR 50ALA 51 0.0000
ALA 51VAL 52 0.0105
VAL 52ARG 53 0.0000
ARG 53SER 54 -0.0679
SER 54GLU 55 -0.0003
GLU 55ARG 56 0.0206
ARG 56LYS 57 0.0003
LYS 57LEU 58 -0.0199
LEU 58HIS 59 0.0004
HIS 59THR 60 0.1077
THR 60VAL 61 0.0001
VAL 61GLY 62 0.0233
GLY 62ASN 63 -0.0002
ASN 63LEU 64 -0.0512
LEU 64TYR 65 -0.0002
TYR 65ILE 66 0.0168
ILE 66VAL 67 0.0001
VAL 67SER 68 -0.0894
SER 68LEU 69 0.0001
LEU 69SER 70 0.0050
SER 70VAL 71 0.0001
VAL 71ALA 72 -0.0472
ALA 72ASP 73 -0.0000
ASP 73LEU 74 0.0112
LEU 74ILE 75 -0.0002
ILE 75VAL 76 -0.0225
VAL 76GLY 77 -0.0000
GLY 77ALA 78 -0.0071
ALA 78VAL 79 -0.0002
VAL 79VAL 80 0.0013
VAL 80MET 81 -0.0002
MET 81PRO 82 0.0076
PRO 82MET 83 -0.0000
MET 83ASN 84 -0.0125
ASN 84ILE 85 0.0001
ILE 85LEU 86 0.0044
LEU 86TYR 87 -0.0002
TYR 87LEU 88 -0.0226
LEU 88LEU 89 -0.0002
LEU 89MET 90 0.0320
MET 90SER 91 -0.0002
SER 91LYS 92 0.0281
LYS 92TRP 93 0.0001
TRP 93SER 94 0.0143
SER 94LEU 95 0.0001
LEU 95GLY 96 0.0593
GLY 96ARG 97 -0.0002
ARG 97PRO 98 -0.0128
PRO 98LEU 99 0.0001
LEU 99CYS 100 0.0086
CYS 100LEU 101 -0.0000
LEU 101PHE 102 -0.0426
PHE 102TRP 103 0.0003
TRP 103LEU 104 0.0063
LEU 104SER 105 -0.0000
SER 105MET 106 -0.0406
MET 106ASP 107 0.0003
ASP 107TYR 108 -0.0081
TYR 108VAL 109 -0.0000
VAL 109ALA 110 -0.0210
ALA 110SER 111 -0.0000
SER 111THR 112 -0.0231
THR 112ALA 113 0.0000
ALA 113SER 114 -0.0029
SER 114ILE 115 -0.0004
ILE 115PHE 116 0.0176
PHE 116SER 117 -0.0002
SER 117VAL 118 -0.0021
VAL 118PHE 119 0.0001
PHE 119ILE 120 0.0388
ILE 120LEU 121 -0.0002
LEU 121CYS 122 0.0269
CYS 122ILE 123 -0.0002
ILE 123ASP 124 -0.0048
ASP 124ARG 125 -0.0000
ARG 125TYR 126 0.0325
TYR 126ARG 127 -0.0001
ARG 127SER 128 -0.0096
SER 128VAL 129 0.0004
VAL 129GLN 130 0.1014
GLN 130GLN 131 -0.0001
GLN 131PRO 132 -0.0156
PRO 132LEU 133 0.0001
LEU 133ARG 134 -0.0332
ARG 134TYR 135 -0.0001
TYR 135LEU 136 0.0392
LEU 136LYS 137 0.0001
LYS 137TYR 138 -0.0284
TYR 138ARG 139 -0.0001
ARG 139THR 140 -0.0370
THR 140LYS 141 0.0002
LYS 141THR 142 -0.0339
THR 142ARG 143 0.0001
ARG 143ALA 144 0.0361
ALA 144SER 145 -0.0004
SER 145ALA 146 0.0216
ALA 146THR 147 -0.0001
THR 147ILE 148 -0.0547
ILE 148LEU 149 -0.0000
LEU 149GLY 150 0.0610
GLY 150ALA 151 -0.0004
ALA 151TRP 152 -0.0214
TRP 152PHE 153 0.0003
PHE 153LEU 154 0.0539
LEU 154SER 155 0.0001
SER 155PHE 156 0.0214
PHE 156LEU 157 -0.0005
LEU 157TRP 158 -0.0892
TRP 158VAL 159 -0.0001
VAL 159ILE 160 -0.0267
ILE 160PRO 161 -0.0004
PRO 161ILE 162 0.0048
ILE 162LEU 163 -0.0001
LEU 163GLY 164 0.0434
GLY 164TRP 165 0.0002
TRP 165ASN 166 -0.0285
ASN 166HIS 167 -0.0001
HIS 167PHE 168 0.0220
PHE 168MET 169 -0.0001
MET 169GLN 170 -0.0071
GLN 170GLN 171 -0.0002
GLN 171VAL 174 0.0206
VAL 174ARG 175 0.0003
ARG 175ARG 176 0.0612
ARG 176GLU 177 -0.0002
GLU 177ASP 178 -0.0066
ASP 178LYS 179 -0.0000
LYS 179CYS 180 -0.0454
CYS 180GLU 181 0.0002
GLU 181THR 182 -0.0466
THR 182ASP 183 0.0002
ASP 183PHE 184 0.0412
PHE 184TYR 185 -0.0001
TYR 185ASP 186 -0.0207
ASP 186VAL 187 0.0004
VAL 187THR 188 0.0232
THR 188TRP 189 0.0004
TRP 189PHE 190 -0.0294
PHE 190LYS 191 -0.0004
LYS 191VAL 192 0.0274
VAL 192MET 193 0.0001
MET 193THR 194 -0.0202
THR 194ALA 195 0.0001
ALA 195ILE 196 0.0101
ILE 196ILE 197 -0.0000
ILE 197ASN 198 -0.0070
ASN 198PHE 199 -0.0001
PHE 199TYR 200 0.0132
TYR 200LEU 201 -0.0000
LEU 201PRO 202 0.0110
PRO 202THR 203 0.0001
THR 203LEU 204 -0.0456
LEU 204LEU 205 0.0000
LEU 205MET 206 0.0132
MET 206LEU 207 0.0004
LEU 207TRP 208 -0.0669
TRP 208PHE 209 -0.0001
PHE 209TYR 210 -0.0162
TYR 210ALA 211 -0.0000
ALA 211LYS 212 -0.0338
LYS 212ILE 213 -0.0004
ILE 213TYR 214 -0.0347
TYR 214LYS 215 0.0004
LYS 215ALA 216 -0.0045
ALA 216VAL 217 -0.0002
VAL 217LYS 218 -0.0598
LYS 218ARG 219 0.0002
ARG 219GLN 220 0.0353
GLN 220LEU 221 0.0004
LEU 221ASN 408 -0.0195
ASN 408ARG 409 0.0000
ARG 409GLU 410 0.0271
GLU 410ARG 411 0.0001
ARG 411LYS 412 -0.0561
LYS 412ALA 413 -0.0001
ALA 413ALA 414 -0.0082
ALA 414LYS 415 -0.0001
LYS 415GLN 416 -0.0398
GLN 416LEU 417 -0.0001
LEU 417GLY 418 -0.0239
GLY 418PHE 419 -0.0002
PHE 419ILE 420 0.0436
ILE 420MET 421 -0.0001
MET 421ALA 422 -0.0145
ALA 422ALA 423 -0.0000
ALA 423PHE 424 0.0379
PHE 424ILE 425 -0.0002
ILE 425LEU 426 -0.0835
LEU 426CYS 427 -0.0002
CYS 427TRP 428 0.0242
TRP 428ILE 429 0.0004
ILE 429PRO 430 -0.0376
PRO 430TYR 431 0.0000
TYR 431PHE 432 -0.0597
PHE 432ILE 433 0.0001
ILE 433PHE 434 -0.0257
PHE 434PHE 435 -0.0004
PHE 435MET 436 -0.0462
MET 436VAL 437 -0.0002
VAL 437ILE 438 0.0061
ILE 438ALA 439 0.0001
ALA 439PHE 440 -0.0182
PHE 440CYS 441 -0.0004
CYS 441LYS 442 0.0305
LYS 442ASN 443 0.0002
ASN 443CYS 444 0.0112
CYS 444CYS 445 0.0002
CYS 445ASN 446 0.0053
ASN 446GLU 447 0.0000
GLU 447HIS 448 0.0008
HIS 448LEU 449 -0.0001
LEU 449HIS 450 0.0082
HIS 450MET 451 -0.0001
MET 451PHE 452 0.0425
PHE 452THR 453 -0.0002
THR 453ILE 454 -0.0012
ILE 454TRP 455 -0.0003
TRP 455LEU 456 -0.0109
LEU 456GLY 457 -0.0000
GLY 457TYR 458 -0.0009
TYR 458ILE 459 0.0002
ILE 459ASN 460 -0.0162
ASN 460SER 461 -0.0003
SER 461THR 462 0.0006
THR 462LEU 463 -0.0003
LEU 463ASN 464 0.0345
ASN 464PRO 465 0.0001
PRO 465LEU 466 -0.0366
LEU 466ILE 467 -0.0003
ILE 467TYR 468 0.0717
TYR 468PRO 469 -0.0006
PRO 469LEU 470 -0.0441
LEU 470CYS 471 -0.0003
CYS 471ASN 472 0.0077
ASN 472GLU 473 0.0003
GLU 473ASN 474 -0.0321
ASN 474PHE 475 -0.0002
PHE 475LYS 476 -0.0090
LYS 476LYS 477 -0.0002
LYS 477THR 478 -0.0268
THR 478PHE 479 0.0002
PHE 479LYS 480 -0.0071
LYS 480ARG 481 0.0002

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.