CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  MEMBRANE PROTEIN 20-NOV-23 8X5Y  ***

Normal Mode Analysis for ID 2601201921523260072

The following table indicates for every normal mode its frequency (black, normalized relative to the lowest mode frequency) and its collectivity (magenta). If a second structure was submitted, the cummulative overlap between the normal modes and the conformational change is computed (red). The corresponding amplitude (dq) is then also given (green). Click on the mode link to obtain a visualization of the mean square displacement <R2> of the C-alpha atoms associated to each mode.

[HELP on collectivity] [HELP on overlap]

<R2> frequency collectivity
mode 7 1.00 0.4816
mode 8 1.22 0.4891
mode 9 1.33 0.5784
mode 10 1.46 0.2310
mode 11 1.64 0.4076
mode 12 1.70 0.3097
mode 13 1.87 0.4100
mode 14 2.00 0.3981
mode 15 2.05 0.2171
mode 16 2.16 0.3795
mode 17 2.20 0.2272
mode 18 2.28 0.3878
mode 19 2.34 0.2882
mode 20 2.38 0.3677
mode 21 2.48 0.3426
mode 22 2.53 0.5034
mode 23 2.58 0.4351
mode 24 2.66 0.3615
mode 25 2.74 0.3843
mode 26 2.80 0.3156
mode 27 2.84 0.3952
mode 28 2.95 0.4356
mode 29 3.04 0.4872
mode 30 3.08 0.5053
mode 31 3.13 0.4288
mode 32 3.21 0.3765
mode 33 3.23 0.3631
mode 34 3.26 0.4224
mode 35 3.34 0.4722
mode 36 3.41 0.3270
mode 37 3.42 0.3297
mode 38 3.45 0.4109
mode 39 3.49 0.4819
mode 40 3.60 0.4150
mode 41 3.67 0.4954
mode 42 3.71 0.3636
mode 43 3.78 0.3596
mode 44 3.82 0.5690
mode 45 3.87 0.4727
mode 46 3.89 0.4809
mode 47 3.91 0.4216
mode 48 3.96 0.3203
mode 49 3.99 0.2428
mode 50 4.16 0.3841
mode 51 4.18 0.4014
mode 52 4.22 0.3376
mode 53 4.26 0.4332
mode 54 4.30 0.4167
mode 55 4.35 0.4515
mode 56 4.37 0.4319
mode 57 4.40 0.2976
mode 58 4.43 0.3348
mode 59 4.46 0.4433
mode 60 4.52 0.4279
mode 61 4.54 0.3782
mode 62 4.62 0.3670
mode 63 4.66 0.3785
mode 64 4.69 0.4781
mode 65 4.74 0.5631
mode 66 4.78 0.3905
mode 67 4.81 0.4280
mode 68 4.83 0.2528
mode 69 4.85 0.3954
mode 70 4.86 0.4720
mode 71 4.90 0.4720
mode 72 4.94 0.5451
mode 73 5.02 0.3642
mode 74 5.06 0.5061
mode 75 5.07 0.4432
mode 76 5.09 0.5500
mode 77 5.10 0.3555
mode 78 5.17 0.3738
mode 79 5.19 0.5282
mode 80 5.26 0.4765
mode 81 5.27 0.4986
mode 82 5.30 0.4888
mode 83 5.31 0.4471
mode 84 5.34 0.2581
mode 85 5.38 0.3855
mode 86 5.44 0.2999
mode 87 5.47 0.4908
mode 88 5.48 0.5423
mode 89 5.55 0.4906
mode 90 5.56 0.4378
mode 91 5.57 0.4072
mode 92 5.60 0.4951
mode 93 5.68 0.5509
mode 94 5.69 0.5154
mode 95 5.71 0.3714
mode 96 5.73 0.4774
mode 97 5.80 0.4132
mode 98 5.81 0.4649
mode 99 5.82 0.4786
mode 100 5.86 0.4974
mode 101 5.86 0.4510
mode 102 5.90 0.4591
mode 103 5.94 0.4884
mode 104 5.95 0.5250
mode 105 5.96 0.4228
mode 106 6.01 0.3728

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.