CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  gp130wt  ***

Normal Mode Analysis for ID 2601221240153497519

The following table indicates for every normal mode its frequency (black, normalized relative to the lowest mode frequency) and its collectivity (magenta). If a second structure was submitted, the cummulative overlap between the normal modes and the conformational change is computed (red). The corresponding amplitude (dq) is then also given (green). Click on the mode link to obtain a visualization of the mean square displacement <R2> of the C-alpha atoms associated to each mode.

[HELP on collectivity] [HELP on overlap]

<R2> frequency collectivity
mode 7 1.00 0.4891
mode 8 1.17 0.3711
mode 9 1.79 0.1763
mode 10 2.05 0.2324
mode 11 2.19 0.4331
mode 12 2.31 0.2464
mode 13 2.80 0.3159
mode 14 3.03 0.1876
mode 15 3.29 0.6931
mode 16 3.48 0.3638
mode 17 3.66 0.3974
mode 18 3.92 0.2067
mode 19 4.35 0.1938
mode 20 4.55 0.2291
mode 21 4.95 0.4244
mode 22 5.33 0.2519
mode 23 5.40 0.2271
mode 24 5.64 0.2934
mode 25 5.80 0.3528
mode 26 6.28 0.3992
mode 27 6.34 0.1994
mode 28 6.85 0.4014
mode 29 6.88 0.2756
mode 30 7.38 0.2864
mode 31 7.44 0.4320
mode 32 8.13 0.3359
mode 33 8.16 0.5152
mode 34 8.45 0.2854
mode 35 8.74 0.3621
mode 36 9.23 0.4159
mode 37 9.29 0.3514
mode 38 9.34 0.1878
mode 39 9.69 0.1973
mode 40 9.81 0.3498
mode 41 10.11 0.4451
mode 42 10.49 0.2916
mode 43 10.71 0.4072
mode 44 10.92 0.1399
mode 45 11.13 0.2749
mode 46 11.18 0.2609
mode 47 11.36 0.2747
mode 48 11.62 0.4525
mode 49 11.74 0.2336
mode 50 11.95 0.3441
mode 51 12.19 0.2882
mode 52 12.55 0.2999
mode 53 12.74 0.1340
mode 54 12.84 0.2427
mode 55 12.86 0.2854
mode 56 13.14 0.2901
mode 57 13.22 0.2448
mode 58 13.55 0.2146
mode 59 13.62 0.0799
mode 60 13.86 0.3595
mode 61 14.16 0.1689
mode 62 14.47 0.2619
mode 63 14.58 0.2795
mode 64 14.81 0.1363
mode 65 14.87 0.4451
mode 66 15.00 0.2639
mode 67 15.12 0.1526
mode 68 15.24 0.1703
mode 69 15.41 0.2161
mode 70 15.49 0.4315
mode 71 15.61 0.2251
mode 72 15.78 0.3593
mode 73 16.18 0.2249
mode 74 16.25 0.2113
mode 75 16.43 0.3298
mode 76 16.48 0.2518
mode 77 16.72 0.4121
mode 78 16.77 0.4320
mode 79 16.82 0.4737
mode 80 16.99 0.3209
mode 81 17.08 0.3387
mode 82 17.18 0.3690
mode 83 17.21 0.4883
mode 84 17.30 0.3576
mode 85 17.41 0.4564
mode 86 17.55 0.3782
mode 87 17.58 0.4052
mode 88 17.79 0.4084
mode 89 17.84 0.2839
mode 90 18.19 0.3520
mode 91 18.21 0.3551
mode 92 18.30 0.2602
mode 93 18.34 0.3141
mode 94 18.55 0.4719
mode 95 18.58 0.1304
mode 96 18.70 0.4105
mode 97 18.78 0.4780
mode 98 18.81 0.5220
mode 99 19.01 0.3911
mode 100 19.10 0.4006
mode 101 19.20 0.5016
mode 102 19.22 0.4037
mode 103 19.36 0.3241
mode 104 19.47 0.2910
mode 105 19.52 0.4221
mode 106 19.66 0.4370

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.