CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  gp130M  ***

<R2> analysis for 2601221356393511805

---  normal mode 29  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0996
PRO 10.0177
GLY 20.0335
SER 30.0155
SER 40.0236
GLY 50.0121
LEU 60.0185
PRO 70.0204
PRO 80.0103
GLU 90.0189
LYS 100.0105
PRO 110.0088
LYS 120.0098
ASN 130.0095
LEU 140.0085
SER 150.0057
CYS 160.0061
VAL 170.0092
ASN 180.0148
GLU 190.0189
GLY 200.0249
LYS 210.0246
LYS 220.0181
MET 230.0083
ARG 240.0072
CYS 250.0064
GLU 260.0064
TRP 270.0097
ASP 280.0100
GLY 290.0155
GLY 300.0211
ARG 310.0409
GLU 320.0359
THR 330.0144
HIS 340.0246
LEU 350.0291
GLU 360.0443
THR 370.0189
ASN 380.0142
PHE 390.0077
THR 400.0120
LEU 410.0127
LYS 420.0151
SER 430.0111
GLU 440.0128
TRP 450.0112
ALA 460.0210
THR 470.0158
HIS 480.0131
LYS 490.0179
PHE 500.0154
ALA 510.0203
ASP 520.0203
CYS 530.0186
LYS 540.0163
ALA 550.0150
LYS 560.0264
ARG 570.0499
ASP 580.0463
THR 590.0192
PRO 600.0107
THR 610.0055
SER 620.0071
CYS 630.0143
THR 640.0098
VAL 650.0134
ASP 660.0186
TYR 670.0173
SER 680.0228
THR 690.0253
VAL 700.0255
TYR 710.0314
PHE 720.0326
VAL 730.0207
ASN 740.0181
ILE 750.0092
GLU 760.0143
VAL 770.0110
TRP 780.0126
VAL 790.0102
GLU 800.0094
ALA 810.0041
GLU 820.0108
ASN 830.0262
ALA 840.0463
LEU 850.0421
GLY 860.0349
LYS 870.0117
VAL 880.0089
THR 890.0073
SER 900.0083
ASP 910.0138
HIS 920.0165
ILE 930.0166
ASN 940.0183
PHE 950.0140
ASP 960.0189
PRO 970.0193
VAL 980.0260
TYR 990.0147
LYS 1000.0104
VAL 1010.0051
PRO 1020.0061
ASN 1030.0101
PRO 1040.0136
PRO 1050.0123
HIS 1060.0135
ASN 1070.0125
LEU 1080.0106
SER 1090.0086
VAL 1100.0052
ILE 1110.0075
ASN 1120.0054
SER 1130.0159
GLU 1140.0158
GLU 1150.0275
LEU 1160.0282
SER 1170.0151
SER 1180.0250
ILE 1190.0180
LEU 1200.0081
LYS 1210.0047
LEU 1220.0055
THR 1230.0083
TRP 1240.0108
THR 1250.0113
ASN 1260.0107
PRO 1270.0107
SER 1280.0112
ILE 1290.0072
LYS 1300.0153
SER 1310.0305
VAL 1320.0187
ILE 1330.0114
ILE 1340.0078
LEU 1350.0101
TYR 1360.0122
ASN 1370.0133
ILE 1380.0126
GLN 1390.0116
TYR 1400.0077
ARG 1410.0119
THR 1420.0214
LYS 1430.0710
ASP 1440.0996
ALA 1450.0589
THR 1460.0401
TRP 1470.0179
SER 1480.0224
GLN 1490.0140
ILE 1500.0145
PRO 1510.0157
PRO 1520.0158
GLU 1530.0182
ASP 1540.0161
THR 1550.0141
ALA 1560.0142
SER 1570.0133
THR 1580.0137
ARG 1590.0104
SER 1600.0100
SER 1610.0077
PHE 1620.0072
THR 1630.0086
VAL 1640.0086
GLN 1650.0280
ASP 1660.0364
LEU 1670.0303
LYS 1680.0353
PRO 1690.0351
PHE 1700.0288
THR 1710.0185
TYR 1720.0099
VAL 1730.0042
PHE 1740.0058
ARG 1750.0104
ILE 1760.0122
ARG 1770.0135
CYS 1780.0114
MET 1790.0075
LYS 1800.0087
GLU 1810.0109
ASP 1820.0200
LYS 1830.0211
GLY 1840.0216
TYR 1850.0140
TRP 1860.0114
SER 1870.0126
ASP 1880.0175
TRP 1890.0152
SER 1900.0150
GLU 1910.0113
GLU 1920.0070
ALA 1930.0059
SER 1940.0056
GLY 1950.0078
ILE 1960.0135
THR 1970.0173
TYR 1980.0211
GLU 1990.0455
ASP 2000.0345
ARG 2010.0059
PRO 2020.0273
SER 2030.0320
LYS 2040.0123
GLU 2050.0071
PRO 2060.0080
SER 2070.0110
PHE 2080.0109
TRP 2090.0096

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.