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elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  gp130M  ***

B-factor analysis for ID 2601221356393511805

Overall B-factor prediction

Correlation= -0.308 for 209 C-alpha atoms.

B-factors for all residues

Residue-by-residue B-factor prediction for CA atoms

B-factors are computed based on the first 100 normal modes (B-PREDICT) and are scaled to match the overall B-factors in the submitted model (B-SCALED). A high correlation with the observations is an indicator that the normal modes capture well the overall flexibility features of the model. Comparison of the observed (B-OBS, blue) and the computed (B-SCALED, red) B-factors for all C-alpha atoms is presented below. Differences between B-factors from normal mode analysis and from X-ray crystallographic data may for example indicate regions where the protein flexibility is modified due to external factors such as tight crystall-packing.

  ATOM TYP  RES  RESID   B-PREDICT    B-SCALED      B-OBS
B-SCALEDB-OBS
     2 CA   PRO      1      5.3424    128.3564     46.7200
     9 CA   GLY      2      2.6793    107.4564     60.0300
    13 CA   SER      3      0.7859     92.5968     62.4400
    19 CA   SER      4      0.6485     91.5185     83.3100
    25 CA   GLY      5      0.3777     89.3935     92.0000
    29 CA   LEU      6      0.3169     88.9162     96.3800
    37 CA   PRO      7      0.2554     88.4332     96.6900
    44 CA   PRO      8      0.1735     87.7907     97.5600
    51 CA   GLU      9      0.1754     87.8053     97.6900
    60 CA   LYS     10      0.1439     87.5586     98.0000
    69 CA   PRO     11      0.0979     87.1970     98.0600
    76 CA   LYS     12      0.1283     87.4359     97.8800
    85 CA   ASN     13      0.1421     87.5439     97.5600
    93 CA   LEU     14      0.0788     87.0478     97.6900
   101 CA   SER     15      0.0851     87.0971     94.5000
   107 CA   CYS     16      0.0719     86.9932     90.8100
   113 CA   VAL     17      0.0992     87.2078     86.5000
   120 CA   ASN     18      0.1007     87.2194     80.3100
   128 CA   GLU     19      0.1483     87.5929     77.1900
   137 CA   GLY     20      0.1583     87.6716     72.5600
   141 CA   LYS     21      0.1432     87.5527     77.2500
   150 CA   LYS     22      0.1132     87.3178     84.6200
   159 CA   MET     23      0.0742     87.0110     87.6200
   167 CA   ARG     24      0.0832     87.0824     91.8100
   178 CA   CYS     25      0.0615     86.9120     95.3100
   184 CA   GLU     26      0.0800     87.0570     97.3800
   193 CA   TRP     27      0.0862     87.1059     97.9400
   207 CA   ASP     28      0.1235     87.3986     97.6200
   215 CA   GLY     29      0.1142     87.3251     94.3100
   219 CA   GLY     30      0.1741     87.7957     93.6200
   223 CA   ARG     31      0.2576     88.4504     94.6200
   234 CA   GLU     32      0.2723     88.5662     92.7500
   243 CA   THR     33      0.2520     88.4067     94.5600
   250 CA   HIS     34      0.3330     89.0428     93.8800
   260 CA   LEU     35      0.2784     88.6143     94.3800
   268 CA   GLU     36      0.2506     88.3960     94.3800
   277 CA   THR     37      0.1555     87.6494     96.4400
   284 CA   ASN     38      0.1258     87.4162     97.4400
   292 CA   PHE     39      0.0721     86.9948     98.0600
   303 CA   THR     40      0.0647     86.9367     98.0600
   310 CA   LEU     41      0.0414     86.7536     97.9400
   318 CA   LYS     42      0.0508     86.8277     97.2500
   327 CA   SER     43      0.0484     86.8090     94.4400
   333 CA   GLU     44      0.0705     86.9827     92.0000
   342 CA   TRP     45      0.0851     87.0971     87.3800
   356 CA   ALA     46      0.1498     87.6048     84.0000
   361 CA   THR     47      0.2115     88.0891     83.5000
   368 CA   HIS     48      0.1522     87.6234     86.8800
   378 CA   LYS     49      0.1174     87.3505     89.5600
   387 CA   PHE     50      0.0942     87.1682     89.5600
   398 CA   ALA     51      0.1128     87.3140     92.9400
   403 CA   ASP     52      0.0898     87.1337     96.0600
   411 CA   CYS     53      0.0778     87.0393     96.7500
   417 CA   LYS     54      0.0956     87.1792     97.3100
   426 CA   ALA     55      0.0951     87.1752     96.8100
   431 CA   LYS     56      0.1670     87.7395     95.6200
   440 CA   ARG     57      0.2371     88.2898     90.8100
   451 CA   ASP     58      0.3061     88.8310     93.1900
   459 CA   THR     59      0.1811     87.8502     93.7500
   466 CA   PRO     60      0.1162     87.3413     93.6200
   473 CA   THR     61      0.0906     87.1399     95.6900
   480 CA   SER     62      0.0871     87.1124     97.3100
   486 CA   CYS     63      0.0748     87.0164     96.5600
   492 CA   THR     64      0.0868     87.1105     93.6200
   499 CA   VAL     65      0.0779     87.0406     90.5600
   506 CA   ASP     66      0.1109     87.2993     85.2500
   514 CA   TYR     67      0.0974     87.1936     78.3800
   526 CA   SER     68      0.1242     87.4036     70.6200
   532 CA   THR     69      0.1050     87.2534     60.0000
   539 CA   VAL     70      0.0978     87.1969     63.4700
   546 CA   TYR     71      0.0931     87.1596     59.6900
   558 CA   PHE     72      0.0988     87.2046     60.6900
   569 CA   VAL     73      0.0870     87.1116     74.7500
   576 CA   ASN     74      0.0737     87.0073     81.8100
   584 CA   ILE     75      0.0538     86.8509     88.9400
   592 CA   GLU     76      0.0577     86.8821     94.0000
   601 CA   VAL     77      0.0416     86.7557     95.5600
   608 CA   TRP     78      0.0481     86.8064     98.0000
   622 CA   VAL     79      0.0482     86.8076     98.3800
   629 CA   GLU     80      0.0757     87.0234     98.1900
   638 CA   ALA     81      0.0960     87.1822     98.1900
   643 CA   GLU     82      0.1509     87.6134     98.0000
   652 CA   ASN     83      0.2140     88.1082     96.9400
   660 CA   ALA     84      0.3369     89.0733     96.8800
   665 CA   LEU     85      0.3494     89.1715     97.1900
   673 CA   GLY     86      0.2890     88.6972     96.9400
   677 CA   LYS     87      0.1952     87.9607     98.1200
   686 CA   VAL     88      0.1574     87.6640     98.2500
   693 CA   THR     89      0.1095     87.2882     98.2500
   700 CA   SER     90      0.0939     87.1663     98.3800
   706 CA   ASP     91      0.1180     87.3553     98.1900
   714 CA   HIS     92      0.0909     87.1423     97.6900
   724 CA   ILE     93      0.0780     87.0411     95.0000
   732 CA   ASN     94      0.0787     87.0466     90.0000
   740 CA   PHE     95      0.0603     86.9023     86.4400
   751 CA   ASP     96      0.0741     87.0109     77.6200
   759 CA   PRO     97      0.0754     87.0208     67.3800
   766 CA   VAL     98      0.0968     87.1890     62.1200
   773 CA   TYR     99      0.1238     87.4010     53.3400
   785 CA   LYS    100      0.1422     87.5452     57.0600
   794 CA   VAL    101      0.1360     87.4962     64.1900
   801 CA   PRO    102      0.1229     87.3933     71.1200
   808 CA   ASN    103      0.1556     87.6501     84.5600
   816 CA   PRO    104      0.1383     87.5148     92.1900
   823 CA   PRO    105      0.1266     87.4226     95.3800
   830 CA   HIS    106      0.1730     87.7871     95.4400
   840 CA   ASN    107      0.2052     88.0391     97.6200
   848 CA   LEU    108      0.1531     87.6304     98.3800
   856 CA   SER    109      0.1717     87.7762     98.3100
   862 CA   VAL    110      0.1539     87.6369     98.2500
   869 CA   ILE    111      0.1861     87.8897     97.6200
   877 CA   ASN    112      0.1945     87.9552     95.6200
   885 CA   SER    113      0.2538     88.4211     89.7500
   891 CA   GLU    114      0.2927     88.7261     84.9400
   900 CA   GLU    115      0.3609     89.2618     89.1900
   909 CA   LEU    116      0.2648     88.5076     90.6200
   917 CA   SER    117      0.2229     88.1785     92.6200
   923 CA   SER    118      0.1918     87.9342     94.9400
   929 CA   ILE    119      0.1579     87.6684     95.8800
   937 CA   LEU    120      0.1359     87.4959     98.0000
   945 CA   LYS    121      0.1340     87.4810     97.9400
   954 CA   LEU    122      0.1162     87.3409     98.5000
   962 CA   THR    123      0.1338     87.4790     98.5000
   969 CA   TRP    124      0.1367     87.5017     97.8800
   983 CA   THR    125      0.1608     87.6913     96.6900
   990 CA   ASN    126      0.1344     87.4835     92.4400
   998 CA   PRO    127      0.1524     87.6253     84.5000
  1005 CA   SER    128      0.2084     88.0648     78.5000
  1011 CA   ILE    129      0.1405     87.5320     70.3100
  1019 CA   LYS    130      0.1766     87.8154     67.1900
  1028 CA   SER    131      0.2038     88.0282     69.2500
  1034 CA   VAL    132      0.1164     87.3426     77.4400
  1041 CA   ILE    133      0.1032     87.2391     87.8100
  1049 CA   ILE    134      0.0845     87.0921     90.1900
  1057 CA   LEU    135      0.0807     87.0628     93.4400
  1065 CA   TYR    136      0.0807     87.0625     95.8100
  1077 CA   ASN    137      0.0918     87.1493     97.1200
  1085 CA   ILE    138      0.0933     87.1616     98.2500
  1093 CA   GLN    139      0.1212     87.3805     98.3100
  1102 CA   TYR    140      0.1349     87.4879     98.0600
  1114 CA   ARG    141      0.1843     87.8755     97.6200
  1125 CA   THR    142      0.2248     88.1931     96.3100
  1132 CA   LYS    143      0.3375     89.0774     87.5000
  1141 CA   ASP    144      0.4441     89.9145     86.3800
  1149 CA   ALA    145      0.3293     89.0137     92.4400
  1154 CA   THR    146      0.3254     88.9827     95.6200
  1161 CA   TRP    147      0.2097     88.0746     97.5000
  1175 CA   SER    148      0.1828     87.8633     97.3100
  1181 CA   GLN    149      0.1425     87.5476     97.6200
  1190 CA   ILE    150      0.1212     87.3799     97.6900
  1198 CA   PRO    151      0.1560     87.6535     97.2500
  1205 CA   PRO    152      0.1280     87.4338     93.8100
  1212 CA   GLU    153      0.1719     87.7781     95.5600
  1221 CA   ASP    154      0.1376     87.5091     96.6900
  1229 CA   THR    155      0.0941     87.1677     95.5000
  1236 CA   ALA    156      0.1047     87.2504     92.9400
  1241 CA   SER    157      0.1051     87.2541     93.8100
  1247 CA   THR    158      0.1026     87.2342     93.4400
  1254 CA   ARG    159      0.1118     87.3062     95.5600
  1265 CA   SER    160      0.1219     87.3856     96.3800
  1271 CA   SER    161      0.1178     87.3536     98.1200
  1277 CA   PHE    162      0.1045     87.2492     98.0000
  1288 CA   THR    163      0.1228     87.3925     97.5600
  1295 CA   VAL    164      0.1191     87.3636     97.2500
  1302 CA   GLN    165      0.1664     87.7350     95.1900
  1311 CA   ASP    166      0.2312     88.2437     94.1900
  1319 CA   LEU    167      0.1816     87.8546     94.8800
  1327 CA   LYS    168      0.2277     88.2164     94.5000
  1336 CA   PRO    169      0.2263     88.2054     94.5600
  1343 CA   PHE    170      0.2224     88.1742     95.3800
  1354 CA   THR    171      0.2108     88.0832     96.4400
  1361 CA   TYR    172      0.1694     87.7587     97.6200
  1373 CA   VAL    173      0.1675     87.7437     98.0000
  1380 CA   PHE    174      0.1317     87.4630     98.3800
  1391 CA   ARG    175      0.1295     87.4455     98.3100
  1402 CA   ILE    176      0.1043     87.2474     98.1900
  1410 CA   ARG    177      0.1052     87.2543     96.4400
  1421 CA   CYS    178      0.0899     87.1344     93.2500
  1427 CA   MET    179      0.0907     87.1410     88.7500
  1435 CA   LYS    180      0.0823     87.0751     83.3100
  1444 CA   GLU    181      0.0949     87.1740     79.8100
  1453 CA   ASP    182      0.1179     87.3540     66.2500
  1461 CA   LYS    183      0.1031     87.2380     59.0000
  1470 CA   GLY    184      0.1302     87.4507     62.5000
  1474 CA   TYR    185      0.1298     87.4475     78.8800
  1486 CA   TRP    186      0.1198     87.3690     89.3800
  1500 CA   SER    187      0.1348     87.4868     90.8100
  1506 CA   ASP    188      0.1772     87.8200     93.3100
  1514 CA   TRP    189      0.1605     87.6884     96.7500
  1528 CA   SER    190      0.1615     87.6966     97.6200
  1534 CA   GLU    191      0.2171     88.1325     97.3100
  1543 CA   GLU    192      0.1913     87.9303     97.6900
  1552 CA   ALA    193      0.1811     87.8504     98.1200
  1557 CA   SER    194      0.1834     87.8683     97.6900
  1563 CA   GLY    195      0.1776     87.8229     96.5600
  1567 CA   ILE    196      0.1916     87.9327     96.5600
  1575 CA   THR    197      0.1874     87.8995     95.7500
  1582 CA   TYR    198      0.2353     88.2760     93.0000
  1594 CA   GLU    199      0.2942     88.7379     90.5000
  1603 CA   ASP    200      0.3171     88.9175     80.6900
  1611 CA   ARG    201      0.4377     89.8642     74.5000
  1622 CA   PRO    202      0.5515     90.7571     70.6900
  1629 CA   SER    203      1.2259     96.0497     69.0600
  1635 CA   LYS    204      1.3973     97.3951     67.2500
  1644 CA   GLU    205      1.9961    102.0948     68.6900
  1653 CA   PRO    206      3.5317    114.1462     67.1200
  1660 CA   SER    207      6.3748    136.4590     73.0600
  1666 CA   PHE    208     10.1723    166.2620     72.8100
  1677 CA   TRP    209     16.2913    214.2842     69.7500

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.