CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  TRANSPORT PROTEIN 17-DEC-20 7L2L  ***

<R2> analysis for 260127153226105187

---  normal mode 102  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0724
VAL 2830.0397
GLY 2840.0197
ASN 2850.0097
THR 2860.0093
VAL 2870.0129
LEU 2880.0113
HIS 2890.0095
ALA 2900.0097
LEU 2910.0101
VAL 2920.0074
GLU 2930.0099
VAL 2940.0081
ALA 2950.0121
ASP 2960.0162
ASN 2970.0151
THR 2980.0287
VAL 2990.0129
ASP 3000.0215
ASN 3010.0163
THR 3020.0126
LYS 3030.0020
PHE 3040.0094
VAL 3050.0086
THR 3060.0071
SER 3070.0055
MET 3080.0036
TYR 3090.0061
ASN 3100.0099
GLU 3110.0088
ILE 3120.0094
LEU 3130.0086
ILE 3140.0100
LEU 3150.0103
GLY 3160.0083
ALA 3170.0119
LYS 3180.0123
LEU 3190.0243
HIS 3200.0151
PRO 3210.0233
THR 3220.0271
LEU 3230.0130
LYS 3240.0204
LEU 3250.0134
GLU 3260.0103
GLU 3270.0179
ILE 3280.0127
THR 3290.0112
ASN 3300.0126
ARG 3310.0239
LYS 3320.0317
GLY 3330.0266
LEU 3340.0120
THR 3350.0116
PRO 3360.0126
LEU 3370.0066
ALA 3380.0121
LEU 3390.0117
ALA 3400.0109
ALA 3410.0155
SER 3420.0179
SER 3430.0160
GLY 3440.0130
LYS 3450.0070
ILE 3460.0092
GLY 3470.0089
VAL 3480.0067
LEU 3490.0092
ALA 3500.0089
TYR 3510.0100
ILE 3520.0078
LEU 3530.0085
GLN 3540.0084
ARG 3550.0104
GLU 3560.0074
ILE 3570.0084
HIS 3580.0320
GLU 3590.0195
PRO 3600.0569
GLU 3610.0163
CYS 3620.0123
ARG 3630.0102
HIS 3640.0095
LEU 3650.0064
SER 3660.0045
ARG 3670.0053
LYS 3680.0043
PHE 3690.0053
THR 3700.0216
GLU 3710.0217
TRP 3720.0164
ALA 3730.0172
TYR 3740.0118
GLY 3750.0104
PRO 3760.0096
VAL 3770.0067
HIS 3780.0161
SER 3790.0152
SER 3800.0127
LEU 3810.0106
TYR 3820.0041
ASP 3830.0106
LEU 3840.0133
SER 3850.0171
CYS 3860.0175
ILE 3870.0170
ASP 3880.0139
THR 3890.0120
CYS 3900.0129
GLU 3910.0150
LYS 3920.0192
ASN 3930.0114
SER 3940.0162
VAL 3950.0158
LEU 3960.0152
GLU 3970.0188
VAL 3980.0184
ILE 3990.0185
ALA 4000.0181
TYR 4010.0151
SER 4020.0172
SER 4030.0268
SER 4040.0306
GLU 4050.0290
THR 4060.0170
PRO 4070.0112
ASN 4080.0106
ARG 4090.0114
HIS 4100.0088
ASP 4110.0082
MET 4120.0071
LEU 4130.0072
LEU 4140.0069
VAL 4150.0066
GLU 4160.0064
PRO 4170.0062
LEU 4180.0051
ASN 4190.0050
ARG 4200.0065
LEU 4210.0073
LEU 4220.0064
GLN 4230.0095
ASP 4240.0129
LYS 4250.0108
TRP 4260.0095
ASP 4270.0100
ARG 4280.0089
PHE 4290.0053
VAL 4300.0093
LYS 4310.0121
ARG 4320.0106
ILE 4330.0145
PHE 4340.0140
TYR 4350.0144
PHE 4360.0180
ASN 4370.0189
PHE 4380.0145
PHE 4390.0160
VAL 4400.0145
TYR 4410.0104
CYS 4420.0054
LEU 4430.0050
TYR 4440.0017
MET 4450.0076
ILE 4460.0124
ILE 4470.0120
PHE 4480.0089
THR 4490.0103
ALA 4500.0126
ALA 4510.0075
ALA 4520.0073
TYR 4530.0078
TYR 4540.0070
ARG 4550.0063
PRO 4560.0083
VAL 4570.0389
GLU 4580.0151
GLY 4590.0242
LEU 4600.0218
PRO 4610.0143
PRO 4620.0098
TYR 4630.0206
LYS 4640.0259
LEU 4650.0104
LYS 4660.0123
ASN 4670.0192
THR 4680.0158
VAL 4690.0125
GLY 4700.0088
ASP 4710.0080
TYR 4720.0085
PHE 4730.0123
ARG 4740.0077
VAL 4750.0139
THR 4760.0217
GLY 4770.0150
GLU 4780.0142
ILE 4790.0230
LEU 4800.0204
SER 4810.0116
VAL 4820.0053
SER 4830.0090
GLY 4840.0167
GLY 4850.0123
VAL 4860.0177
TYR 4870.0177
PHE 4880.0103
PHE 4890.0154
PHE 4900.0172
ARG 4910.0092
GLY 4920.0144
ILE 4930.0193
GLN 4940.0225
TYR 4950.0199
PHE 4960.0095
LEU 4970.0176
GLN 4980.0141
ARG 4990.0104
ARG 5000.0227
PRO 5010.0115
SER 5020.0111
LEU 5030.0086
LYS 5040.0099
SER 5050.0091
LEU 5060.0079
PHE 5070.0122
VAL 5080.0096
ASP 5090.0104
SER 5100.0080
TYR 5110.0095
SER 5120.0036
GLU 5130.0033
ILE 5140.0035
LEU 5150.0032
PHE 5160.0067
PHE 5170.0097
VAL 5180.0061
GLN 5190.0055
SER 5200.0106
LEU 5210.0114
PHE 5220.0046
MET 5230.0039
LEU 5240.0072
VAL 5250.0076
SER 5260.0073
VAL 5270.0024
VAL 5280.0048
LEU 5290.0082
TYR 5300.0080
PHE 5310.0034
SER 5320.0053
GLN 5330.0089
ARG 5340.0171
LYS 5350.0124
GLU 5360.0141
TYR 5370.0111
VAL 5380.0160
ALA 5390.0192
SER 5400.0125
MET 5410.0086
VAL 5420.0188
PHE 5430.0135
SER 5440.0080
LEU 5450.0121
ALA 5460.0141
MET 5470.0100
GLY 5480.0083
TRP 5490.0150
THR 5500.0135
ASN 5510.0122
MET 5520.0123
LEU 5530.0077
TYR 5540.0076
TYR 5550.0079
THR 5560.0048
ARG 5570.0054
GLY 5580.0076
PHE 5590.0057
GLN 5600.0101
GLN 5610.0162
MET 5620.0167
GLY 5630.0132
ILE 5640.0202
TYR 5650.0399
ALA 5660.0255
VAL 5670.0135
MET 5680.0139
ILE 5690.0130
GLU 5700.0214
LYS 5710.0194
MET 5720.0212
ILE 5730.0210
LEU 5740.0139
ARG 5750.0123
ASP 5760.0124
LEU 5770.0323
CYS 5780.0289
ARG 5790.0163
PHE 5800.0134
MET 5810.0095
PHE 5820.0081
VAL 5830.0085
TYR 5840.0093
LEU 5850.0106
VAL 5860.0093
PHE 5870.0101
LEU 5880.0100
PHE 5890.0128
GLY 5900.0118
PHE 5910.0071
SER 5920.0071
THR 5930.0083
ALA 5940.0083
VAL 5950.0056
VAL 5960.0051
THR 5970.0067
LEU 5980.0029
ILE 5990.0031
GLU 6000.0055
ASP 6010.0163
SER 6260.0146
TYR 6270.0074
ASN 6280.0070
SER 6290.0078
LEU 6300.0028
TYR 6310.0030
SER 6320.0022
THR 6330.0045
CYS 6340.0049
LEU 6350.0106
GLU 6360.0082
LEU 6370.0047
PHE 6380.0106
LYS 6390.0033
PHE 6400.0046
THR 6410.0135
ILE 6420.0139
GLY 6430.0213
MET 6440.0273
GLY 6450.0121
ASP 6460.0155
LEU 6470.0057
GLU 6480.0036
PHE 6490.0031
THR 6500.0114
GLU 6510.0172
ASN 6520.0108
TYR 6530.0062
ASP 6540.0068
PHE 6550.0088
LYS 6560.0192
ALA 6570.0253
VAL 6580.0190
PHE 6590.0073
ILE 6600.0074
ILE 6610.0123
LEU 6620.0070
LEU 6630.0052
LEU 6640.0055
ALA 6650.0097
TYR 6660.0050
VAL 6670.0077
ILE 6680.0112
LEU 6690.0061
THR 6700.0042
TYR 6710.0118
ILE 6720.0087
LEU 6730.0065
LEU 6740.0093
LEU 6750.0101
ASN 6760.0119
MET 6770.0085
LEU 6780.0021
ILE 6790.0062
ALA 6800.0062
LEU 6810.0065
MET 6820.0087
GLY 6830.0349
GLU 6840.0215
THR 6850.0106
VAL 6860.0262
ASN 6870.0263
LYS 6880.0279
ILE 6890.0145
ALA 6900.0105
GLN 6910.0052
GLU 6920.0071
SER 6930.0072
LYS 6940.0125
ASN 6950.0090
ILE 6960.0096
TRP 6970.0111
LYS 6980.0062
LEU 6990.0069
GLN 7000.0072
ARG 7010.0065
ALA 7020.0073
ILE 7030.0076
THR 7040.0063
ILE 7050.0076
LEU 7060.0082
ASP 7070.0127
THR 7080.0082
GLU 7090.0075
LYS 7100.0138
SER 7110.0133
PHE 7120.0139
LEU 7130.0127
LYS 7140.0048
CYS 7150.0189
MET 7160.0142
ARG 7170.0403
LYS 7180.0724
ALA 7190.0280
PHE 7200.0220
ARG 7210.0149
SER 7220.0074
GLY 7230.0072
LYS 7240.0095
LEU 7250.0503
LEU 7260.0172
TYR 7380.0163
ARG 7390.0156
TRP 7400.0140
CYS 7410.0089
PHE 7420.0019
ARG 7430.0041
VAL 7440.0128
ASP 7450.0134
GLU 7460.0131

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.