CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  TRANSPORT PROTEIN 17-DEC-20 7L2L  ***

<R2> analysis for 260127153226105187

---  normal mode 105  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0533
VAL 2830.0161
GLY 2840.0113
ASN 2850.0069
THR 2860.0215
VAL 2870.0268
LEU 2880.0109
HIS 2890.0105
ALA 2900.0224
LEU 2910.0171
VAL 2920.0153
GLU 2930.0327
VAL 2940.0277
ALA 2950.0145
ASP 2960.0169
ASN 2970.0165
THR 2980.0533
VAL 2990.0119
ASP 3000.0432
ASN 3010.0150
THR 3020.0132
LYS 3030.0265
PHE 3040.0053
VAL 3050.0053
THR 3060.0035
SER 3070.0092
MET 3080.0076
TYR 3090.0050
ASN 3100.0126
GLU 3110.0147
ILE 3120.0193
LEU 3130.0186
ILE 3140.0166
LEU 3150.0180
GLY 3160.0266
ALA 3170.0347
LYS 3180.0321
LEU 3190.0317
HIS 3200.0191
PRO 3210.0477
THR 3220.0269
LEU 3230.0206
LYS 3240.0324
LEU 3250.0268
GLU 3260.0115
GLU 3270.0257
ILE 3280.0250
THR 3290.0130
ASN 3300.0019
ARG 3310.0459
LYS 3320.0377
GLY 3330.0274
LEU 3340.0197
THR 3350.0176
PRO 3360.0155
LEU 3370.0265
ALA 3380.0306
LEU 3390.0284
ALA 3400.0261
ALA 3410.0230
SER 3420.0226
SER 3430.0262
GLY 3440.0199
LYS 3450.0143
ILE 3460.0068
GLY 3470.0073
VAL 3480.0100
LEU 3490.0124
ALA 3500.0080
TYR 3510.0103
ILE 3520.0121
LEU 3530.0116
GLN 3540.0097
ARG 3550.0188
GLU 3560.0185
ILE 3570.0184
HIS 3580.0189
GLU 3590.0068
PRO 3600.0187
GLU 3610.0209
CYS 3620.0192
ARG 3630.0178
HIS 3640.0194
LEU 3650.0218
SER 3660.0216
ARG 3670.0093
LYS 3680.0097
PHE 3690.0101
THR 3700.0239
GLU 3710.0177
TRP 3720.0150
ALA 3730.0123
TYR 3740.0059
GLY 3750.0265
PRO 3760.0284
VAL 3770.0227
HIS 3780.0199
SER 3790.0161
SER 3800.0180
LEU 3810.0144
TYR 3820.0094
ASP 3830.0081
LEU 3840.0052
SER 3850.0155
CYS 3860.0202
ILE 3870.0156
ASP 3880.0119
THR 3890.0248
CYS 3900.0319
GLU 3910.0279
LYS 3920.0206
ASN 3930.0185
SER 3940.0190
VAL 3950.0168
LEU 3960.0085
GLU 3970.0081
VAL 3980.0114
ILE 3990.0088
ALA 4000.0053
TYR 4010.0060
SER 4020.0091
SER 4030.0171
SER 4040.0066
GLU 4050.0185
THR 4060.0131
PRO 4070.0169
ASN 4080.0112
ARG 4090.0051
HIS 4100.0092
ASP 4110.0086
MET 4120.0070
LEU 4130.0055
LEU 4140.0073
VAL 4150.0100
GLU 4160.0130
PRO 4170.0124
LEU 4180.0104
ASN 4190.0142
ARG 4200.0136
LEU 4210.0125
LEU 4220.0153
GLN 4230.0213
ASP 4240.0238
LYS 4250.0159
TRP 4260.0107
ASP 4270.0191
ARG 4280.0228
PHE 4290.0170
VAL 4300.0071
LYS 4310.0170
ARG 4320.0294
ILE 4330.0137
PHE 4340.0117
TYR 4350.0193
PHE 4360.0181
ASN 4370.0187
PHE 4380.0151
PHE 4390.0149
VAL 4400.0160
TYR 4410.0098
CYS 4420.0061
LEU 4430.0102
TYR 4440.0032
MET 4450.0055
ILE 4460.0085
ILE 4470.0070
PHE 4480.0127
THR 4490.0115
ALA 4500.0127
ALA 4510.0157
ALA 4520.0092
TYR 4530.0326
TYR 4540.0136
ARG 4550.0092
PRO 4560.0140
VAL 4570.0143
GLU 4580.0136
GLY 4590.0168
LEU 4600.0234
PRO 4610.0194
PRO 4620.0192
TYR 4630.0039
LYS 4640.0019
LEU 4650.0048
LYS 4660.0062
ASN 4670.0055
THR 4680.0058
VAL 4690.0089
GLY 4700.0115
ASP 4710.0072
TYR 4720.0024
PHE 4730.0064
ARG 4740.0075
VAL 4750.0067
THR 4760.0072
GLY 4770.0054
GLU 4780.0019
ILE 4790.0013
LEU 4800.0026
SER 4810.0054
VAL 4820.0046
SER 4830.0045
GLY 4840.0060
GLY 4850.0040
VAL 4860.0064
TYR 4870.0067
PHE 4880.0040
PHE 4890.0050
PHE 4900.0065
ARG 4910.0047
GLY 4920.0045
ILE 4930.0043
GLN 4940.0042
TYR 4950.0038
PHE 4960.0032
LEU 4970.0043
GLN 4980.0041
ARG 4990.0059
ARG 5000.0107
PRO 5010.0166
SER 5020.0058
LEU 5030.0109
LYS 5040.0131
SER 5050.0095
LEU 5060.0093
PHE 5070.0090
VAL 5080.0046
ASP 5090.0017
SER 5100.0022
TYR 5110.0034
SER 5120.0036
GLU 5130.0035
ILE 5140.0031
LEU 5150.0029
PHE 5160.0029
PHE 5170.0024
VAL 5180.0021
GLN 5190.0018
SER 5200.0035
LEU 5210.0038
PHE 5220.0038
MET 5230.0023
LEU 5240.0040
VAL 5250.0077
SER 5260.0093
VAL 5270.0102
VAL 5280.0079
LEU 5290.0040
TYR 5300.0070
PHE 5310.0043
SER 5320.0112
GLN 5330.0187
ARG 5340.0087
LYS 5350.0107
GLU 5360.0115
TYR 5370.0108
VAL 5380.0098
ALA 5390.0113
SER 5400.0103
MET 5410.0059
VAL 5420.0069
PHE 5430.0088
SER 5440.0071
LEU 5450.0080
ALA 5460.0100
MET 5470.0056
GLY 5480.0049
TRP 5490.0057
THR 5500.0033
ASN 5510.0048
MET 5520.0051
LEU 5530.0122
TYR 5540.0114
TYR 5550.0108
THR 5560.0075
ARG 5570.0066
GLY 5580.0033
PHE 5590.0016
GLN 5600.0053
GLN 5610.0014
MET 5620.0041
GLY 5630.0043
ILE 5640.0046
TYR 5650.0061
ALA 5660.0042
VAL 5670.0066
MET 5680.0048
ILE 5690.0071
GLU 5700.0076
LYS 5710.0063
MET 5720.0073
ILE 5730.0085
LEU 5740.0091
ARG 5750.0069
ASP 5760.0070
LEU 5770.0148
CYS 5780.0139
ARG 5790.0112
PHE 5800.0118
MET 5810.0092
PHE 5820.0086
VAL 5830.0097
TYR 5840.0070
LEU 5850.0061
VAL 5860.0086
PHE 5870.0086
LEU 5880.0078
PHE 5890.0062
GLY 5900.0060
PHE 5910.0054
SER 5920.0037
THR 5930.0017
ALA 5940.0025
VAL 5950.0026
VAL 5960.0035
THR 5970.0047
LEU 5980.0052
ILE 5990.0066
GLU 6000.0097
ASP 6010.0168
SER 6260.0085
TYR 6270.0060
ASN 6280.0056
SER 6290.0071
LEU 6300.0066
TYR 6310.0101
SER 6320.0073
THR 6330.0050
CYS 6340.0052
LEU 6350.0101
GLU 6360.0057
LEU 6370.0060
PHE 6380.0104
LYS 6390.0063
PHE 6400.0047
THR 6410.0077
ILE 6420.0075
GLY 6430.0043
MET 6440.0063
GLY 6450.0033
ASP 6460.0113
LEU 6470.0069
GLU 6480.0068
PHE 6490.0069
THR 6500.0078
GLU 6510.0073
ASN 6520.0080
TYR 6530.0091
ASP 6540.0066
PHE 6550.0016
LYS 6560.0074
ALA 6570.0139
VAL 6580.0130
PHE 6590.0064
ILE 6600.0063
ILE 6610.0097
LEU 6620.0051
LEU 6630.0038
LEU 6640.0035
ALA 6650.0042
TYR 6660.0045
VAL 6670.0031
ILE 6680.0050
LEU 6690.0063
THR 6700.0041
TYR 6710.0066
ILE 6720.0048
LEU 6730.0037
LEU 6740.0040
LEU 6750.0047
ASN 6760.0050
MET 6770.0093
LEU 6780.0073
ILE 6790.0075
ALA 6800.0125
LEU 6810.0120
MET 6820.0114
GLY 6830.0107
GLU 6840.0221
THR 6850.0217
VAL 6860.0130
ASN 6870.0074
LYS 6880.0164
ILE 6890.0130
ALA 6900.0070
GLN 6910.0114
GLU 6920.0093
SER 6930.0107
LYS 6940.0063
ASN 6950.0105
ILE 6960.0119
TRP 6970.0130
LYS 6980.0110
LEU 6990.0109
GLN 7000.0101
ARG 7010.0115
ALA 7020.0112
ILE 7030.0107
THR 7040.0092
ILE 7050.0106
LEU 7060.0099
ASP 7070.0067
THR 7080.0046
GLU 7090.0092
LYS 7100.0157
SER 7110.0162
PHE 7120.0194
LEU 7130.0231
LYS 7140.0137
CYS 7150.0133
MET 7160.0162
ARG 7170.0232
LYS 7180.0485
ALA 7190.0191
PHE 7200.0132
ARG 7210.0066
SER 7220.0116
GLY 7230.0114
LYS 7240.0176
LEU 7250.0385
LEU 7260.0195
TYR 7380.0190
ARG 7390.0187
TRP 7400.0144
CYS 7410.0139
PHE 7420.0128
ARG 7430.0150
VAL 7440.0214
ASP 7450.0238
GLU 7460.0318

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.