CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  TRANSPORT PROTEIN 17-DEC-20 7L2L  ***

<R2> analysis for 260127153226105187

---  normal mode 106  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0472
VAL 2830.0158
GLY 2840.0142
ASN 2850.0116
THR 2860.0149
VAL 2870.0161
LEU 2880.0120
HIS 2890.0077
ALA 2900.0077
LEU 2910.0085
VAL 2920.0056
GLU 2930.0040
VAL 2940.0051
ALA 2950.0092
ASP 2960.0051
ASN 2970.0100
THR 2980.0428
VAL 2990.0349
ASP 3000.0192
ASN 3010.0165
THR 3020.0186
LYS 3030.0328
PHE 3040.0187
VAL 3050.0087
THR 3060.0061
SER 3070.0106
MET 3080.0179
TYR 3090.0167
ASN 3100.0278
GLU 3110.0346
ILE 3120.0233
LEU 3130.0141
ILE 3140.0141
LEU 3150.0160
GLY 3160.0172
ALA 3170.0134
LYS 3180.0145
LEU 3190.0060
HIS 3200.0213
PRO 3210.0045
THR 3220.0109
LEU 3230.0151
LYS 3240.0166
LEU 3250.0073
GLU 3260.0074
GLU 3270.0134
ILE 3280.0101
THR 3290.0083
ASN 3300.0087
ARG 3310.0096
LYS 3320.0116
GLY 3330.0161
LEU 3340.0058
THR 3350.0057
PRO 3360.0066
LEU 3370.0060
ALA 3380.0053
LEU 3390.0047
ALA 3400.0093
ALA 3410.0091
SER 3420.0096
SER 3430.0092
GLY 3440.0079
LYS 3450.0083
ILE 3460.0057
GLY 3470.0058
VAL 3480.0042
LEU 3490.0062
ALA 3500.0114
TYR 3510.0108
ILE 3520.0044
LEU 3530.0038
GLN 3540.0076
ARG 3550.0092
GLU 3560.0120
ILE 3570.0125
HIS 3580.0085
GLU 3590.0084
PRO 3600.0125
GLU 3610.0130
CYS 3620.0109
ARG 3630.0101
HIS 3640.0076
LEU 3650.0059
SER 3660.0089
ARG 3670.0063
LYS 3680.0062
PHE 3690.0085
THR 3700.0083
GLU 3710.0073
TRP 3720.0074
ALA 3730.0043
TYR 3740.0076
GLY 3750.0054
PRO 3760.0085
VAL 3770.0036
HIS 3780.0041
SER 3790.0037
SER 3800.0046
LEU 3810.0052
TYR 3820.0053
ASP 3830.0060
LEU 3840.0064
SER 3850.0067
CYS 3860.0064
ILE 3870.0061
ASP 3880.0072
THR 3890.0069
CYS 3900.0069
GLU 3910.0189
LYS 3920.0058
ASN 3930.0080
SER 3940.0097
VAL 3950.0089
LEU 3960.0072
GLU 3970.0089
VAL 3980.0121
ILE 3990.0087
ALA 4000.0108
TYR 4010.0173
SER 4020.0213
SER 4030.0344
SER 4040.0284
GLU 4050.0193
THR 4060.0104
PRO 4070.0135
ASN 4080.0142
ARG 4090.0145
HIS 4100.0165
ASP 4110.0123
MET 4120.0060
LEU 4130.0068
LEU 4140.0084
VAL 4150.0137
GLU 4160.0121
PRO 4170.0111
LEU 4180.0102
ASN 4190.0081
ARG 4200.0078
LEU 4210.0081
LEU 4220.0069
GLN 4230.0108
ASP 4240.0105
LYS 4250.0093
TRP 4260.0091
ASP 4270.0133
ARG 4280.0117
PHE 4290.0103
VAL 4300.0088
LYS 4310.0086
ARG 4320.0070
ILE 4330.0065
PHE 4340.0032
TYR 4350.0033
PHE 4360.0043
ASN 4370.0040
PHE 4380.0061
PHE 4390.0047
VAL 4400.0049
TYR 4410.0051
CYS 4420.0048
LEU 4430.0046
TYR 4440.0051
MET 4450.0088
ILE 4460.0096
ILE 4470.0088
PHE 4480.0106
THR 4490.0107
ALA 4500.0120
ALA 4510.0120
ALA 4520.0110
TYR 4530.0179
TYR 4540.0077
ARG 4550.0033
PRO 4560.0085
VAL 4570.0238
GLU 4580.0191
GLY 4590.0097
LEU 4600.0174
PRO 4610.0161
PRO 4620.0175
TYR 4630.0033
LYS 4640.0049
LEU 4650.0047
LYS 4660.0116
ASN 4670.0128
THR 4680.0081
VAL 4690.0101
GLY 4700.0116
ASP 4710.0066
TYR 4720.0017
PHE 4730.0069
ARG 4740.0082
VAL 4750.0086
THR 4760.0075
GLY 4770.0078
GLU 4780.0064
ILE 4790.0058
LEU 4800.0057
SER 4810.0042
VAL 4820.0092
SER 4830.0140
GLY 4840.0136
GLY 4850.0078
VAL 4860.0141
TYR 4870.0194
PHE 4880.0125
PHE 4890.0055
PHE 4900.0103
ARG 4910.0188
GLY 4920.0178
ILE 4930.0096
GLN 4940.0097
TYR 4950.0135
PHE 4960.0153
LEU 4970.0160
GLN 4980.0188
ARG 4990.0165
ARG 5000.0244
PRO 5010.0275
SER 5020.0168
LEU 5030.0354
LYS 5040.0279
SER 5050.0261
LEU 5060.0230
PHE 5070.0128
VAL 5080.0188
ASP 5090.0178
SER 5100.0049
TYR 5110.0074
SER 5120.0110
GLU 5130.0129
ILE 5140.0086
LEU 5150.0109
PHE 5160.0097
PHE 5170.0096
VAL 5180.0093
GLN 5190.0071
SER 5200.0023
LEU 5210.0042
PHE 5220.0036
MET 5230.0029
LEU 5240.0037
VAL 5250.0052
SER 5260.0052
VAL 5270.0087
VAL 5280.0079
LEU 5290.0054
TYR 5300.0083
PHE 5310.0068
SER 5320.0066
GLN 5330.0136
ARG 5340.0100
LYS 5350.0087
GLU 5360.0079
TYR 5370.0074
VAL 5380.0041
ALA 5390.0047
SER 5400.0046
MET 5410.0018
VAL 5420.0074
PHE 5430.0083
SER 5440.0052
LEU 5450.0082
ALA 5460.0114
MET 5470.0071
GLY 5480.0064
TRP 5490.0074
THR 5500.0053
ASN 5510.0077
MET 5520.0074
LEU 5530.0126
TYR 5540.0124
TYR 5550.0118
THR 5560.0162
ARG 5570.0135
GLY 5580.0127
PHE 5590.0125
GLN 5600.0068
GLN 5610.0227
MET 5620.0208
GLY 5630.0201
ILE 5640.0136
TYR 5650.0121
ALA 5660.0133
VAL 5670.0088
MET 5680.0128
ILE 5690.0190
GLU 5700.0197
LYS 5710.0290
MET 5720.0337
ILE 5730.0302
LEU 5740.0292
ARG 5750.0269
ASP 5760.0229
LEU 5770.0241
CYS 5780.0212
ARG 5790.0138
PHE 5800.0223
MET 5810.0154
PHE 5820.0131
VAL 5830.0119
TYR 5840.0032
LEU 5850.0099
VAL 5860.0152
PHE 5870.0142
LEU 5880.0158
PHE 5890.0159
GLY 5900.0154
PHE 5910.0151
SER 5920.0119
THR 5930.0117
ALA 5940.0219
VAL 5950.0216
VAL 5960.0201
THR 5970.0315
LEU 5980.0172
ILE 5990.0222
GLU 6000.0289
ASP 6010.0472
SER 6260.0364
TYR 6270.0248
ASN 6280.0281
SER 6290.0431
LEU 6300.0221
TYR 6310.0249
SER 6320.0216
THR 6330.0116
CYS 6340.0187
LEU 6350.0215
GLU 6360.0172
LEU 6370.0188
PHE 6380.0175
LYS 6390.0147
PHE 6400.0128
THR 6410.0104
ILE 6420.0145
GLY 6430.0161
MET 6440.0162
GLY 6450.0115
ASP 6460.0078
LEU 6470.0094
GLU 6480.0113
PHE 6490.0120
THR 6500.0203
GLU 6510.0150
ASN 6520.0170
TYR 6530.0137
ASP 6540.0090
PHE 6550.0138
LYS 6560.0242
ALA 6570.0260
VAL 6580.0144
PHE 6590.0179
ILE 6600.0221
ILE 6610.0214
LEU 6620.0106
LEU 6630.0103
LEU 6640.0078
ALA 6650.0184
TYR 6660.0156
VAL 6670.0095
ILE 6680.0180
LEU 6690.0202
THR 6700.0109
TYR 6710.0131
ILE 6720.0197
LEU 6730.0191
LEU 6740.0189
LEU 6750.0168
ASN 6760.0140
MET 6770.0386
LEU 6780.0246
ILE 6790.0095
ALA 6800.0325
LEU 6810.0145
MET 6820.0180
GLY 6830.0350
GLU 6840.0350
THR 6850.0354
VAL 6860.0373
ASN 6870.0030
LYS 6880.0353
ILE 6890.0389
ALA 6900.0335
GLN 6910.0403
GLU 6920.0265
SER 6930.0260
LYS 6940.0201
ASN 6950.0151
ILE 6960.0181
TRP 6970.0149
LYS 6980.0096
LEU 6990.0117
GLN 7000.0107
ARG 7010.0086
ALA 7020.0053
ILE 7030.0074
THR 7040.0106
ILE 7050.0077
LEU 7060.0074
ASP 7070.0125
THR 7080.0096
GLU 7090.0062
LYS 7100.0088
SER 7110.0102
PHE 7120.0057
LEU 7130.0052
LYS 7140.0081
CYS 7150.0141
MET 7160.0054
ARG 7170.0072
LYS 7180.0092
ALA 7190.0056
PHE 7200.0040
ARG 7210.0036
SER 7220.0095
GLY 7230.0129
LYS 7240.0096
LEU 7250.0181
LEU 7260.0084
TYR 7380.0028
ARG 7390.0027
TRP 7400.0046
CYS 7410.0070
PHE 7420.0068
ARG 7430.0070
VAL 7440.0078
ASP 7450.0087
GLU 7460.0117

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.