CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  TRANSPORT PROTEIN 17-DEC-20 7L2L  ***

<R2> analysis for 260127153226105187

---  normal mode 14  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0540
VAL 2830.0142
GLY 2840.0128
ASN 2850.0100
THR 2860.0074
VAL 2870.0060
LEU 2880.0047
HIS 2890.0067
ALA 2900.0080
LEU 2910.0067
VAL 2920.0073
GLU 2930.0096
VAL 2940.0101
ALA 2950.0100
ASP 2960.0116
ASN 2970.0108
THR 2980.0135
VAL 2990.0136
ASP 3000.0137
ASN 3010.0117
THR 3020.0100
LYS 3030.0101
PHE 3040.0092
VAL 3050.0075
THR 3060.0067
SER 3070.0064
MET 3080.0049
TYR 3090.0036
ASN 3100.0039
GLU 3110.0027
ILE 3120.0011
LEU 3130.0017
ILE 3140.0037
LEU 3150.0031
GLY 3160.0038
ALA 3170.0054
LYS 3180.0067
LEU 3190.0069
HIS 3200.0074
PRO 3210.0078
THR 3220.0088
LEU 3230.0072
LYS 3240.0051
LEU 3250.0035
GLU 3260.0028
GLU 3270.0046
ILE 3280.0057
THR 3290.0070
ASN 3300.0087
ARG 3310.0117
LYS 3320.0109
GLY 3330.0084
LEU 3340.0067
THR 3350.0049
PRO 3360.0047
LEU 3370.0043
ALA 3380.0052
LEU 3390.0066
ALA 3400.0063
ALA 3410.0061
SER 3420.0066
SER 3430.0075
GLY 3440.0073
LYS 3450.0076
ILE 3460.0069
GLY 3470.0075
VAL 3480.0064
LEU 3490.0055
ALA 3500.0062
TYR 3510.0054
ILE 3520.0038
LEU 3530.0040
GLN 3540.0050
ARG 3550.0047
GLU 3560.0056
ILE 3570.0058
HIS 3580.0086
GLU 3590.0095
PRO 3600.0107
GLU 3610.0093
CYS 3620.0068
ARG 3630.0069
HIS 3640.0059
LEU 3650.0035
SER 3660.0037
ARG 3670.0026
LYS 3680.0043
PHE 3690.0060
THR 3700.0082
GLU 3710.0091
TRP 3720.0113
ALA 3730.0132
TYR 3740.0148
GLY 3750.0166
PRO 3760.0162
VAL 3770.0131
HIS 3780.0107
SER 3790.0083
SER 3800.0067
LEU 3810.0045
TYR 3820.0032
ASP 3830.0018
LEU 3840.0020
SER 3850.0017
CYS 3860.0030
ILE 3870.0035
ASP 3880.0037
THR 3890.0032
CYS 3900.0036
GLU 3910.0042
LYS 3920.0051
ASN 3930.0052
SER 3940.0045
VAL 3950.0047
LEU 3960.0052
GLU 3970.0052
VAL 3980.0055
ILE 3990.0058
ALA 4000.0052
TYR 4010.0051
SER 4020.0049
SER 4030.0048
SER 4040.0047
GLU 4050.0051
THR 4060.0057
PRO 4070.0060
ASN 4080.0057
ARG 4090.0050
HIS 4100.0044
ASP 4110.0050
MET 4120.0061
LEU 4130.0061
LEU 4140.0061
VAL 4150.0066
GLU 4160.0062
PRO 4170.0047
LEU 4180.0053
ASN 4190.0065
ARG 4200.0059
LEU 4210.0050
LEU 4220.0057
GLN 4230.0062
ASP 4240.0059
LYS 4250.0059
TRP 4260.0066
ASP 4270.0071
ARG 4280.0070
PHE 4290.0071
VAL 4300.0074
LYS 4310.0077
ARG 4320.0086
ILE 4330.0087
PHE 4340.0079
TYR 4350.0080
PHE 4360.0088
ASN 4370.0081
PHE 4380.0081
PHE 4390.0095
VAL 4400.0100
TYR 4410.0091
CYS 4420.0121
LEU 4430.0140
TYR 4440.0107
MET 4450.0132
ILE 4460.0180
ILE 4470.0155
PHE 4480.0118
THR 4490.0183
ALA 4500.0211
ALA 4510.0155
ALA 4520.0162
TYR 4530.0260
TYR 4540.0238
ARG 4550.0144
PRO 4560.0110
VAL 4570.0193
GLU 4580.0135
GLY 4590.0242
LEU 4600.0288
PRO 4610.0220
PRO 4620.0213
TYR 4630.0154
LYS 4640.0244
LEU 4650.0295
LYS 4660.0367
ASN 4670.0523
THR 4680.0528
VAL 4690.0540
GLY 4700.0445
ASP 4710.0315
TYR 4720.0375
PHE 4730.0338
ARG 4740.0209
VAL 4750.0170
THR 4760.0212
GLY 4770.0143
GLU 4780.0061
ILE 4790.0108
LEU 4800.0090
SER 4810.0031
VAL 4820.0046
SER 4830.0076
GLY 4840.0013
GLY 4850.0045
VAL 4860.0069
TYR 4870.0033
PHE 4880.0038
PHE 4890.0068
PHE 4900.0053
ARG 4910.0033
GLY 4920.0053
ILE 4930.0055
GLN 4940.0042
TYR 4950.0040
PHE 4960.0051
LEU 4970.0047
GLN 4980.0050
ARG 4990.0051
ARG 5000.0050
PRO 5010.0047
SER 5020.0039
LEU 5030.0041
LYS 5040.0039
SER 5050.0041
LEU 5060.0044
PHE 5070.0044
VAL 5080.0031
ASP 5090.0041
SER 5100.0052
TYR 5110.0052
SER 5120.0061
GLU 5130.0073
ILE 5140.0082
LEU 5150.0094
PHE 5160.0088
PHE 5170.0088
VAL 5180.0126
GLN 5190.0116
SER 5200.0090
LEU 5210.0147
PHE 5220.0170
MET 5230.0119
LEU 5240.0152
VAL 5250.0218
SER 5260.0192
VAL 5270.0179
VAL 5280.0281
LEU 5290.0307
TYR 5300.0220
PHE 5310.0298
SER 5320.0394
GLN 5330.0359
ARG 5340.0365
LYS 5350.0317
GLU 5360.0353
TYR 5370.0248
VAL 5380.0240
ALA 5390.0305
SER 5400.0243
MET 5410.0169
VAL 5420.0216
PHE 5430.0224
SER 5440.0155
LEU 5450.0165
ALA 5460.0217
MET 5470.0167
GLY 5480.0135
TRP 5490.0171
THR 5500.0143
ASN 5510.0115
MET 5520.0116
LEU 5530.0076
TYR 5540.0071
TYR 5550.0073
THR 5560.0055
ARG 5570.0049
GLY 5580.0057
PHE 5590.0061
GLN 5600.0061
GLN 5610.0061
MET 5620.0055
GLY 5630.0038
ILE 5640.0040
TYR 5650.0035
ALA 5660.0019
VAL 5670.0019
MET 5680.0049
ILE 5690.0034
GLU 5700.0014
LYS 5710.0067
MET 5720.0105
ILE 5730.0086
LEU 5740.0116
ARG 5750.0164
ASP 5760.0195
LEU 5770.0210
CYS 5780.0242
ARG 5790.0295
PHE 5800.0308
MET 5810.0292
PHE 5820.0300
VAL 5830.0316
TYR 5840.0301
LEU 5850.0300
VAL 5860.0284
PHE 5870.0250
LEU 5880.0250
PHE 5890.0268
GLY 5900.0237
PHE 5910.0161
SER 5920.0194
THR 5930.0253
ALA 5940.0193
VAL 5950.0147
VAL 5960.0222
THR 5970.0299
LEU 5980.0268
ILE 5990.0250
GLU 6000.0328
ASP 6010.0352
SER 6260.0158
TYR 6270.0146
ASN 6280.0248
SER 6290.0289
LEU 6300.0297
TYR 6310.0309
SER 6320.0210
THR 6330.0165
CYS 6340.0242
LEU 6350.0242
GLU 6360.0157
LEU 6370.0175
PHE 6380.0261
LYS 6390.0259
PHE 6400.0247
THR 6410.0307
ILE 6420.0364
GLY 6430.0345
MET 6440.0313
GLY 6450.0222
ASP 6460.0192
LEU 6470.0157
GLU 6480.0163
PHE 6490.0097
THR 6500.0124
GLU 6510.0235
ASN 6520.0257
TYR 6530.0281
ASP 6540.0353
PHE 6550.0344
LYS 6560.0291
ALA 6570.0279
VAL 6580.0218
PHE 6590.0145
ILE 6600.0141
ILE 6610.0106
LEU 6620.0043
LEU 6630.0049
LEU 6640.0107
ALA 6650.0094
TYR 6660.0143
VAL 6670.0184
ILE 6680.0194
LEU 6690.0214
THR 6700.0255
TYR 6710.0269
ILE 6720.0267
LEU 6730.0264
LEU 6740.0301
LEU 6750.0314
ASN 6760.0329
MET 6770.0355
LEU 6780.0324
ILE 6790.0333
ALA 6800.0373
LEU 6810.0341
MET 6820.0288
GLY 6830.0340
GLU 6840.0349
THR 6850.0269
VAL 6860.0222
ASN 6870.0277
LYS 6880.0230
ILE 6890.0132
ALA 6900.0133
GLN 6910.0092
GLU 6920.0043
SER 6930.0038
LYS 6940.0065
ASN 6950.0040
ILE 6960.0030
TRP 6970.0041
LYS 6980.0055
LEU 6990.0053
GLN 7000.0055
ARG 7010.0062
ALA 7020.0059
ILE 7030.0061
THR 7040.0065
ILE 7050.0060
LEU 7060.0057
ASP 7070.0056
THR 7080.0060
GLU 7090.0056
LYS 7100.0057
SER 7110.0062
PHE 7120.0063
LEU 7130.0069
LYS 7140.0066
CYS 7150.0062
MET 7160.0050
ARG 7170.0047
LYS 7180.0042
ALA 7190.0047
PHE 7200.0039
ARG 7210.0040
SER 7220.0028
GLY 7230.0017
LYS 7240.0017
LEU 7250.0033
LEU 7260.0038
TYR 7380.0025
ARG 7390.0015
TRP 7400.0010
CYS 7410.0019
PHE 7420.0028
ARG 7430.0044
VAL 7440.0058
ASP 7450.0078
GLU 7460.0094

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.