CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  TRANSPORT PROTEIN 17-DEC-20 7L2L  ***

<R2> analysis for 260127153226105187

---  normal mode 26  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0540
VAL 2830.0481
GLY 2840.0359
ASN 2850.0263
THR 2860.0166
VAL 2870.0156
LEU 2880.0094
HIS 2890.0103
ALA 2900.0128
LEU 2910.0111
VAL 2920.0077
GLU 2930.0146
VAL 2940.0165
ALA 2950.0158
ASP 2960.0207
ASN 2970.0131
THR 2980.0311
VAL 2990.0396
ASP 3000.0420
ASN 3010.0268
THR 3020.0221
LYS 3030.0280
PHE 3040.0207
VAL 3050.0148
THR 3060.0169
SER 3070.0186
MET 3080.0129
TYR 3090.0115
ASN 3100.0169
GLU 3110.0164
ILE 3120.0145
LEU 3130.0143
ILE 3140.0179
LEU 3150.0227
GLY 3160.0221
ALA 3170.0116
LYS 3180.0148
LEU 3190.0300
HIS 3200.0335
PRO 3210.0262
THR 3220.0349
LEU 3230.0275
LYS 3240.0151
LEU 3250.0105
GLU 3260.0033
GLU 3270.0039
ILE 3280.0057
THR 3290.0076
ASN 3300.0156
ARG 3310.0246
LYS 3320.0270
GLY 3330.0159
LEU 3340.0120
THR 3350.0064
PRO 3360.0047
LEU 3370.0067
ALA 3380.0101
LEU 3390.0093
ALA 3400.0076
ALA 3410.0074
SER 3420.0079
SER 3430.0100
GLY 3440.0081
LYS 3450.0046
ILE 3460.0045
GLY 3470.0022
VAL 3480.0029
LEU 3490.0064
ALA 3500.0066
TYR 3510.0067
ILE 3520.0076
LEU 3530.0080
GLN 3540.0090
ARG 3550.0132
GLU 3560.0159
ILE 3570.0176
HIS 3580.0401
GLU 3590.0479
PRO 3600.0540
GLU 3610.0307
CYS 3620.0182
ARG 3630.0261
HIS 3640.0205
LEU 3650.0085
SER 3660.0111
ARG 3670.0113
LYS 3680.0123
PHE 3690.0150
THR 3700.0176
GLU 3710.0190
TRP 3720.0135
ALA 3730.0107
TYR 3740.0061
GLY 3750.0059
PRO 3760.0128
VAL 3770.0074
HIS 3780.0047
SER 3790.0097
SER 3800.0102
LEU 3810.0136
TYR 3820.0127
ASP 3830.0152
LEU 3840.0137
SER 3850.0152
CYS 3860.0141
ILE 3870.0113
ASP 3880.0103
THR 3890.0142
CYS 3900.0172
GLU 3910.0278
LYS 3920.0214
ASN 3930.0192
SER 3940.0125
VAL 3950.0101
LEU 3960.0079
GLU 3970.0090
VAL 3980.0090
ILE 3990.0069
ALA 4000.0059
TYR 4010.0072
SER 4020.0080
SER 4030.0089
SER 4040.0083
GLU 4050.0096
THR 4060.0047
PRO 4070.0036
ASN 4080.0029
ARG 4090.0054
HIS 4100.0053
ASP 4110.0054
MET 4120.0051
LEU 4130.0047
LEU 4140.0047
VAL 4150.0065
GLU 4160.0064
PRO 4170.0066
LEU 4180.0057
ASN 4190.0039
ARG 4200.0045
LEU 4210.0045
LEU 4220.0030
GLN 4230.0032
ASP 4240.0049
LYS 4250.0037
TRP 4260.0054
ASP 4270.0093
ARG 4280.0096
PHE 4290.0112
VAL 4300.0098
LYS 4310.0095
ARG 4320.0122
ILE 4330.0142
PHE 4340.0125
TYR 4350.0119
PHE 4360.0129
ASN 4370.0114
PHE 4380.0098
PHE 4390.0101
VAL 4400.0072
TYR 4410.0051
CYS 4420.0074
LEU 4430.0105
TYR 4440.0092
MET 4450.0092
ILE 4460.0114
ILE 4470.0126
PHE 4480.0135
THR 4490.0138
ALA 4500.0145
ALA 4510.0151
ALA 4520.0154
TYR 4530.0164
TYR 4540.0118
ARG 4550.0086
PRO 4560.0041
VAL 4570.0062
GLU 4580.0107
GLY 4590.0144
LEU 4600.0083
PRO 4610.0024
PRO 4620.0046
TYR 4630.0090
LYS 4640.0161
LEU 4650.0201
LYS 4660.0300
ASN 4670.0395
THR 4680.0389
VAL 4690.0412
GLY 4700.0324
ASP 4710.0239
TYR 4720.0298
PHE 4730.0322
ARG 4740.0209
VAL 4750.0145
THR 4760.0215
GLY 4770.0204
GLU 4780.0152
ILE 4790.0182
LEU 4800.0189
SER 4810.0169
VAL 4820.0181
SER 4830.0181
GLY 4840.0135
GLY 4850.0131
VAL 4860.0136
TYR 4870.0097
PHE 4880.0058
PHE 4890.0050
PHE 4900.0050
ARG 4910.0069
GLY 4920.0042
ILE 4930.0041
GLN 4940.0069
TYR 4950.0091
PHE 4960.0099
LEU 4970.0109
GLN 4980.0139
ARG 4990.0145
ARG 5000.0144
PRO 5010.0139
SER 5020.0138
LEU 5030.0197
LYS 5040.0185
SER 5050.0121
LEU 5060.0123
PHE 5070.0135
VAL 5080.0148
ASP 5090.0116
SER 5100.0111
TYR 5110.0130
SER 5120.0133
GLU 5130.0106
ILE 5140.0074
LEU 5150.0063
PHE 5160.0068
PHE 5170.0023
VAL 5180.0041
GLN 5190.0059
SER 5200.0098
LEU 5210.0103
PHE 5220.0125
MET 5230.0156
LEU 5240.0172
VAL 5250.0173
SER 5260.0180
VAL 5270.0197
VAL 5280.0217
LEU 5290.0173
TYR 5300.0129
PHE 5310.0143
SER 5320.0159
GLN 5330.0096
ARG 5340.0143
LYS 5350.0101
GLU 5360.0158
TYR 5370.0149
VAL 5380.0127
ALA 5390.0136
SER 5400.0151
MET 5410.0139
VAL 5420.0139
PHE 5430.0128
SER 5440.0119
LEU 5450.0123
ALA 5460.0111
MET 5470.0065
GLY 5480.0071
TRP 5490.0069
THR 5500.0012
ASN 5510.0032
MET 5520.0054
LEU 5530.0112
TYR 5540.0102
TYR 5550.0106
THR 5560.0130
ARG 5570.0121
GLY 5580.0104
PHE 5590.0103
GLN 5600.0100
GLN 5610.0119
MET 5620.0146
GLY 5630.0145
ILE 5640.0150
TYR 5650.0183
ALA 5660.0185
VAL 5670.0172
MET 5680.0198
ILE 5690.0234
GLU 5700.0228
LYS 5710.0253
MET 5720.0261
ILE 5730.0299
LEU 5740.0309
ARG 5750.0301
ASP 5760.0293
LEU 5770.0289
CYS 5780.0349
ARG 5790.0314
PHE 5800.0194
MET 5810.0190
PHE 5820.0199
VAL 5830.0117
TYR 5840.0047
LEU 5850.0058
VAL 5860.0035
PHE 5870.0056
LEU 5880.0056
PHE 5890.0094
GLY 5900.0099
PHE 5910.0086
SER 5920.0087
THR 5930.0102
ALA 5940.0087
VAL 5950.0062
VAL 5960.0079
THR 5970.0071
LEU 5980.0044
ILE 5990.0051
GLU 6000.0071
ASP 6010.0120
SER 6260.0158
TYR 6270.0119
ASN 6280.0120
SER 6290.0130
LEU 6300.0126
TYR 6310.0159
SER 6320.0118
THR 6330.0086
CYS 6340.0109
LEU 6350.0094
GLU 6360.0065
LEU 6370.0066
PHE 6380.0070
LYS 6390.0064
PHE 6400.0061
THR 6410.0069
ILE 6420.0085
GLY 6430.0083
MET 6440.0066
GLY 6450.0050
ASP 6460.0029
LEU 6470.0023
GLU 6480.0039
PHE 6490.0065
THR 6500.0088
GLU 6510.0102
ASN 6520.0100
TYR 6530.0063
ASP 6540.0063
PHE 6550.0079
LYS 6560.0073
ALA 6570.0085
VAL 6580.0069
PHE 6590.0034
ILE 6600.0037
ILE 6610.0055
LEU 6620.0057
LEU 6630.0051
LEU 6640.0050
ALA 6650.0060
TYR 6660.0060
VAL 6670.0065
ILE 6680.0072
LEU 6690.0054
THR 6700.0041
TYR 6710.0055
ILE 6720.0070
LEU 6730.0066
LEU 6740.0054
LEU 6750.0028
ASN 6760.0048
MET 6770.0140
LEU 6780.0148
ILE 6790.0103
ALA 6800.0168
LEU 6810.0237
MET 6820.0198
GLY 6830.0138
GLU 6840.0235
THR 6850.0243
VAL 6860.0154
ASN 6870.0150
LYS 6880.0210
ILE 6890.0186
ALA 6900.0135
GLN 6910.0124
GLU 6920.0146
SER 6930.0145
LYS 6940.0109
ASN 6950.0084
ILE 6960.0100
TRP 6970.0092
LYS 6980.0057
LEU 6990.0072
GLN 7000.0084
ARG 7010.0067
ALA 7020.0060
ILE 7030.0077
THR 7040.0092
ILE 7050.0068
LEU 7060.0077
ASP 7070.0132
THR 7080.0124
GLU 7090.0111
LYS 7100.0190
SER 7110.0220
PHE 7120.0224
LEU 7130.0471
LYS 7140.0484
CYS 7150.0506
MET 7160.0262
ARG 7170.0195
LYS 7180.0110
ALA 7190.0068
PHE 7200.0054
ARG 7210.0086
SER 7220.0129
GLY 7230.0201
LYS 7240.0281
LEU 7250.0359
LEU 7260.0401
TYR 7380.0274
ARG 7390.0231
TRP 7400.0178
CYS 7410.0178
PHE 7420.0132
ARG 7430.0127
VAL 7440.0091
ASP 7450.0083
GLU 7460.0045

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.