CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  TRANSPORT PROTEIN 17-DEC-20 7L2L  ***

<R2> analysis for 260127153226105187

---  normal mode 29  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.1238
VAL 2830.1238
GLY 2840.0978
ASN 2850.0635
THR 2860.0357
VAL 2870.0285
LEU 2880.0151
HIS 2890.0113
ALA 2900.0147
LEU 2910.0055
VAL 2920.0036
GLU 2930.0134
VAL 2940.0035
ALA 2950.0086
ASP 2960.0191
ASN 2970.0238
THR 2980.0375
VAL 2990.0474
ASP 3000.0444
ASN 3010.0251
THR 3020.0256
LYS 3030.0338
PHE 3040.0285
VAL 3050.0176
THR 3060.0189
SER 3070.0245
MET 3080.0218
TYR 3090.0157
ASN 3100.0136
GLU 3110.0154
ILE 3120.0155
LEU 3130.0112
ILE 3140.0156
LEU 3150.0258
GLY 3160.0343
ALA 3170.0343
LYS 3180.0471
LEU 3190.0609
HIS 3200.0510
PRO 3210.0386
THR 3220.0307
LEU 3230.0283
LYS 3240.0206
LEU 3250.0149
GLU 3260.0136
GLU 3270.0162
ILE 3280.0115
THR 3290.0116
ASN 3300.0251
ARG 3310.0594
LYS 3320.0546
GLY 3330.0218
LEU 3340.0182
THR 3350.0079
PRO 3360.0030
LEU 3370.0042
ALA 3380.0080
LEU 3390.0092
ALA 3400.0079
ALA 3410.0092
SER 3420.0112
SER 3430.0135
GLY 3440.0141
LYS 3450.0124
ILE 3460.0128
GLY 3470.0119
VAL 3480.0090
LEU 3490.0062
ALA 3500.0088
TYR 3510.0077
ILE 3520.0030
LEU 3530.0031
GLN 3540.0018
ARG 3550.0060
GLU 3560.0090
ILE 3570.0110
HIS 3580.0306
GLU 3590.0396
PRO 3600.0477
GLU 3610.0434
CYS 3620.0301
ARG 3630.0221
HIS 3640.0171
LEU 3650.0113
SER 3660.0043
ARG 3670.0051
LYS 3680.0076
PHE 3690.0097
THR 3700.0137
GLU 3710.0107
TRP 3720.0077
ALA 3730.0256
TYR 3740.0288
GLY 3750.0402
PRO 3760.0332
VAL 3770.0203
HIS 3780.0136
SER 3790.0065
SER 3800.0081
LEU 3810.0092
TYR 3820.0067
ASP 3830.0071
LEU 3840.0071
SER 3850.0068
CYS 3860.0067
ILE 3870.0045
ASP 3880.0048
THR 3890.0087
CYS 3900.0096
GLU 3910.0208
LYS 3920.0136
ASN 3930.0104
SER 3940.0045
VAL 3950.0034
LEU 3960.0048
GLU 3970.0069
VAL 3980.0055
ILE 3990.0057
ALA 4000.0049
TYR 4010.0077
SER 4020.0078
SER 4030.0124
SER 4040.0088
GLU 4050.0131
THR 4060.0125
PRO 4070.0129
ASN 4080.0111
ARG 4090.0070
HIS 4100.0044
ASP 4110.0057
MET 4120.0065
LEU 4130.0042
LEU 4140.0036
VAL 4150.0027
GLU 4160.0017
PRO 4170.0038
LEU 4180.0035
ASN 4190.0024
ARG 4200.0031
LEU 4210.0045
LEU 4220.0046
GLN 4230.0044
ASP 4240.0052
LYS 4250.0054
TRP 4260.0054
ASP 4270.0050
ARG 4280.0052
PHE 4290.0054
VAL 4300.0057
LYS 4310.0053
ARG 4320.0054
ILE 4330.0055
PHE 4340.0053
TYR 4350.0052
PHE 4360.0056
ASN 4370.0051
PHE 4380.0047
PHE 4390.0045
VAL 4400.0026
TYR 4410.0027
CYS 4420.0049
LEU 4430.0050
TYR 4440.0047
MET 4450.0055
ILE 4460.0083
ILE 4470.0096
PHE 4480.0079
THR 4490.0074
ALA 4500.0088
ALA 4510.0081
ALA 4520.0068
TYR 4530.0058
TYR 4540.0044
ARG 4550.0040
PRO 4560.0028
VAL 4570.0036
GLU 4580.0070
GLY 4590.0080
LEU 4600.0091
PRO 4610.0086
PRO 4620.0094
TYR 4630.0126
LYS 4640.0163
LEU 4650.0094
LYS 4660.0118
ASN 4670.0099
THR 4680.0142
VAL 4690.0149
GLY 4700.0170
ASP 4710.0066
TYR 4720.0089
PHE 4730.0164
ARG 4740.0113
VAL 4750.0107
THR 4760.0166
GLY 4770.0136
GLU 4780.0100
ILE 4790.0132
LEU 4800.0127
SER 4810.0085
VAL 4820.0086
SER 4830.0085
GLY 4840.0051
GLY 4850.0048
VAL 4860.0045
TYR 4870.0031
PHE 4880.0028
PHE 4890.0031
PHE 4900.0058
ARG 4910.0075
GLY 4920.0074
ILE 4930.0094
GLN 4940.0127
TYR 4950.0131
PHE 4960.0139
LEU 4970.0172
GLN 4980.0202
ARG 4990.0192
ARG 5000.0196
PRO 5010.0172
SER 5020.0170
LEU 5030.0174
LYS 5040.0134
SER 5050.0049
LEU 5060.0067
PHE 5070.0044
VAL 5080.0024
ASP 5090.0048
SER 5100.0078
TYR 5110.0071
SER 5120.0075
GLU 5130.0077
ILE 5140.0044
LEU 5150.0036
PHE 5160.0038
PHE 5170.0025
VAL 5180.0017
GLN 5190.0027
SER 5200.0029
LEU 5210.0036
PHE 5220.0057
MET 5230.0071
LEU 5240.0067
VAL 5250.0076
SER 5260.0080
VAL 5270.0081
VAL 5280.0099
LEU 5290.0096
TYR 5300.0088
PHE 5310.0104
SER 5320.0124
GLN 5330.0106
ARG 5340.0095
LYS 5350.0063
GLU 5360.0077
TYR 5370.0081
VAL 5380.0064
ALA 5390.0078
SER 5400.0080
MET 5410.0070
VAL 5420.0075
PHE 5430.0072
SER 5440.0056
LEU 5450.0062
ALA 5460.0062
MET 5470.0043
GLY 5480.0036
TRP 5490.0054
THR 5500.0046
ASN 5510.0044
MET 5520.0049
LEU 5530.0055
TYR 5540.0057
TYR 5550.0063
THR 5560.0063
ARG 5570.0055
GLY 5580.0047
PHE 5590.0050
GLN 5600.0055
GLN 5610.0079
MET 5620.0083
GLY 5630.0071
ILE 5640.0087
TYR 5650.0104
ALA 5660.0092
VAL 5670.0075
MET 5680.0108
ILE 5690.0120
GLU 5700.0099
LYS 5710.0121
MET 5720.0140
ILE 5730.0142
LEU 5740.0140
ARG 5750.0145
ASP 5760.0151
LEU 5770.0154
CYS 5780.0162
ARG 5790.0157
PHE 5800.0113
MET 5810.0107
PHE 5820.0098
VAL 5830.0048
TYR 5840.0025
LEU 5850.0042
VAL 5860.0024
PHE 5870.0037
LEU 5880.0041
PHE 5890.0058
GLY 5900.0064
PHE 5910.0057
SER 5920.0056
THR 5930.0061
ALA 5940.0053
VAL 5950.0044
VAL 5960.0059
THR 5970.0051
LEU 5980.0043
ILE 5990.0056
GLU 6000.0074
ASP 6010.0104
SER 6260.0103
TYR 6270.0084
ASN 6280.0092
SER 6290.0096
LEU 6300.0088
TYR 6310.0111
SER 6320.0082
THR 6330.0063
CYS 6340.0079
LEU 6350.0067
GLU 6360.0050
LEU 6370.0052
PHE 6380.0055
LYS 6390.0052
PHE 6400.0050
THR 6410.0042
ILE 6420.0054
GLY 6430.0056
MET 6440.0056
GLY 6450.0047
ASP 6460.0036
LEU 6470.0030
GLU 6480.0020
PHE 6490.0037
THR 6500.0052
GLU 6510.0053
ASN 6520.0070
TYR 6530.0054
ASP 6540.0043
PHE 6550.0024
LYS 6560.0017
ALA 6570.0010
VAL 6580.0018
PHE 6590.0028
ILE 6600.0024
ILE 6610.0033
LEU 6620.0044
LEU 6630.0045
LEU 6640.0044
ALA 6650.0049
TYR 6660.0046
VAL 6670.0045
ILE 6680.0042
LEU 6690.0034
THR 6700.0015
TYR 6710.0026
ILE 6720.0035
LEU 6730.0045
LEU 6740.0052
LEU 6750.0069
ASN 6760.0085
MET 6770.0126
LEU 6780.0149
ILE 6790.0169
ALA 6800.0174
LEU 6810.0191
MET 6820.0205
GLY 6830.0208
GLU 6840.0194
THR 6850.0172
VAL 6860.0171
ASN 6870.0181
LYS 6880.0143
ILE 6890.0118
ALA 6900.0124
GLN 6910.0093
GLU 6920.0069
SER 6930.0076
LYS 6940.0074
ASN 6950.0035
ILE 6960.0030
TRP 6970.0041
LYS 6980.0028
LEU 6990.0031
GLN 7000.0045
ARG 7010.0053
ALA 7020.0053
ILE 7030.0056
THR 7040.0057
ILE 7050.0064
LEU 7060.0068
ASP 7070.0071
THR 7080.0071
GLU 7090.0062
LYS 7100.0066
SER 7110.0069
PHE 7120.0053
LEU 7130.0065
LYS 7140.0183
CYS 7150.0334
MET 7160.0295
ARG 7170.0228
LYS 7180.0183
ALA 7190.0046
PHE 7200.0052
ARG 7210.0049
SER 7220.0099
GLY 7230.0121
LYS 7240.0205
LEU 7250.0207
LEU 7260.0205
TYR 7380.0155
ARG 7390.0117
TRP 7400.0106
CYS 7410.0086
PHE 7420.0075
ARG 7430.0075
VAL 7440.0041
ASP 7450.0035
GLU 7460.0049

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.