CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  TRANSPORT PROTEIN 17-DEC-20 7L2L  ***

<R2> analysis for 260127153226105187

---  normal mode 33  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0750
VAL 2830.0430
GLY 2840.0327
ASN 2850.0171
THR 2860.0099
VAL 2870.0107
LEU 2880.0086
HIS 2890.0083
ALA 2900.0086
LEU 2910.0084
VAL 2920.0058
GLU 2930.0052
VAL 2940.0052
ALA 2950.0091
ASP 2960.0131
ASN 2970.0124
THR 2980.0267
VAL 2990.0364
ASP 3000.0352
ASN 3010.0188
THR 3020.0184
LYS 3030.0233
PHE 3040.0107
VAL 3050.0087
THR 3060.0142
SER 3070.0098
MET 3080.0075
TYR 3090.0103
ASN 3100.0108
GLU 3110.0093
ILE 3120.0122
LEU 3130.0136
ILE 3140.0155
LEU 3150.0185
GLY 3160.0210
ALA 3170.0236
LYS 3180.0266
LEU 3190.0334
HIS 3200.0342
PRO 3210.0357
THR 3220.0392
LEU 3230.0299
LYS 3240.0241
LEU 3250.0123
GLU 3260.0123
GLU 3270.0159
ILE 3280.0104
THR 3290.0135
ASN 3300.0172
ARG 3310.0401
LYS 3320.0364
GLY 3330.0266
LEU 3340.0097
THR 3350.0075
PRO 3360.0069
LEU 3370.0052
ALA 3380.0027
LEU 3390.0048
ALA 3400.0037
ALA 3410.0033
SER 3420.0052
SER 3430.0045
GLY 3440.0037
LYS 3450.0022
ILE 3460.0041
GLY 3470.0076
VAL 3480.0072
LEU 3490.0052
ALA 3500.0079
TYR 3510.0106
ILE 3520.0094
LEU 3530.0067
GLN 3540.0091
ARG 3550.0129
GLU 3560.0137
ILE 3570.0110
HIS 3580.0131
GLU 3590.0133
PRO 3600.0238
GLU 3610.0212
CYS 3620.0160
ARG 3630.0176
HIS 3640.0206
LEU 3650.0151
SER 3660.0159
ARG 3670.0106
LYS 3680.0120
PHE 3690.0139
THR 3700.0203
GLU 3710.0252
TRP 3720.0256
ALA 3730.0305
TYR 3740.0257
GLY 3750.0119
PRO 3760.0275
VAL 3770.0242
HIS 3780.0093
SER 3790.0134
SER 3800.0077
LEU 3810.0086
TYR 3820.0034
ASP 3830.0040
LEU 3840.0038
SER 3850.0034
CYS 3860.0029
ILE 3870.0044
ASP 3880.0087
THR 3890.0080
CYS 3900.0053
GLU 3910.0070
LYS 3920.0048
ASN 3930.0033
SER 3940.0069
VAL 3950.0064
LEU 3960.0092
GLU 3970.0101
VAL 3980.0101
ILE 3990.0101
ALA 4000.0154
TYR 4010.0148
SER 4020.0142
SER 4030.0158
SER 4040.0147
GLU 4050.0174
THR 4060.0111
PRO 4070.0110
ASN 4080.0092
ARG 4090.0144
HIS 4100.0137
ASP 4110.0138
MET 4120.0088
LEU 4130.0106
LEU 4140.0096
VAL 4150.0075
GLU 4160.0074
PRO 4170.0076
LEU 4180.0102
ASN 4190.0115
ARG 4200.0119
LEU 4210.0122
LEU 4220.0127
GLN 4230.0112
ASP 4240.0123
LYS 4250.0117
TRP 4260.0104
ASP 4270.0117
ARG 4280.0104
PHE 4290.0112
VAL 4300.0093
LYS 4310.0083
ARG 4320.0114
ILE 4330.0122
PHE 4340.0077
TYR 4350.0101
PHE 4360.0135
ASN 4370.0091
PHE 4380.0076
PHE 4390.0131
VAL 4400.0111
TYR 4410.0061
CYS 4420.0098
LEU 4430.0106
TYR 4440.0065
MET 4450.0060
ILE 4460.0094
ILE 4470.0078
PHE 4480.0039
THR 4490.0060
ALA 4500.0071
ALA 4510.0033
ALA 4520.0010
TYR 4530.0045
TYR 4540.0041
ARG 4550.0028
PRO 4560.0060
VAL 4570.0066
GLU 4580.0086
GLY 4590.0094
LEU 4600.0077
PRO 4610.0081
PRO 4620.0103
TYR 4630.0084
LYS 4640.0088
LEU 4650.0089
LYS 4660.0143
ASN 4670.0216
THR 4680.0233
VAL 4690.0230
GLY 4700.0211
ASP 4710.0122
TYR 4720.0105
PHE 4730.0131
ARG 4740.0110
VAL 4750.0053
THR 4760.0076
GLY 4770.0090
GLU 4780.0060
ILE 4790.0078
LEU 4800.0082
SER 4810.0040
VAL 4820.0056
SER 4830.0064
GLY 4840.0036
GLY 4850.0037
VAL 4860.0047
TYR 4870.0055
PHE 4880.0058
PHE 4890.0060
PHE 4900.0090
ARG 4910.0117
GLY 4920.0108
ILE 4930.0151
GLN 4940.0208
TYR 4950.0196
PHE 4960.0221
LEU 4970.0293
GLN 4980.0335
ARG 4990.0289
ARG 5000.0308
PRO 5010.0231
SER 5020.0321
LEU 5030.0362
LYS 5040.0310
SER 5050.0107
LEU 5060.0122
PHE 5070.0051
VAL 5080.0070
ASP 5090.0063
SER 5100.0103
TYR 5110.0052
SER 5120.0076
GLU 5130.0090
ILE 5140.0074
LEU 5150.0061
PHE 5160.0071
PHE 5170.0078
VAL 5180.0074
GLN 5190.0058
SER 5200.0054
LEU 5210.0089
PHE 5220.0088
MET 5230.0064
LEU 5240.0098
VAL 5250.0123
SER 5260.0090
VAL 5270.0114
VAL 5280.0151
LEU 5290.0108
TYR 5300.0089
PHE 5310.0131
SER 5320.0138
GLN 5330.0093
ARG 5340.0064
LYS 5350.0034
GLU 5360.0070
TYR 5370.0068
VAL 5380.0044
ALA 5390.0081
SER 5400.0086
MET 5410.0049
VAL 5420.0060
PHE 5430.0087
SER 5440.0065
LEU 5450.0058
ALA 5460.0095
MET 5470.0091
GLY 5480.0068
TRP 5490.0096
THR 5500.0114
ASN 5510.0093
MET 5520.0096
LEU 5530.0116
TYR 5540.0100
TYR 5550.0090
THR 5560.0108
ARG 5570.0120
GLY 5580.0124
PHE 5590.0146
GLN 5600.0197
GLN 5610.0218
MET 5620.0192
GLY 5630.0166
ILE 5640.0206
TYR 5650.0201
ALA 5660.0143
VAL 5670.0150
MET 5680.0171
ILE 5690.0144
GLU 5700.0103
LYS 5710.0110
MET 5720.0123
ILE 5730.0103
LEU 5740.0086
ARG 5750.0090
ASP 5760.0111
LEU 5770.0114
CYS 5780.0133
ARG 5790.0141
PHE 5800.0087
MET 5810.0079
PHE 5820.0113
VAL 5830.0066
TYR 5840.0036
LEU 5850.0060
VAL 5860.0032
PHE 5870.0030
LEU 5880.0047
PHE 5890.0043
GLY 5900.0052
PHE 5910.0056
SER 5920.0061
THR 5930.0072
ALA 5940.0084
VAL 5950.0074
VAL 5960.0078
THR 5970.0109
LEU 5980.0122
ILE 5990.0101
GLU 6000.0133
ASP 6010.0169
SER 6260.0072
TYR 6270.0058
ASN 6280.0092
SER 6290.0078
LEU 6300.0085
TYR 6310.0078
SER 6320.0054
THR 6330.0059
CYS 6340.0073
LEU 6350.0068
GLU 6360.0057
LEU 6370.0064
PHE 6380.0071
LYS 6390.0069
PHE 6400.0064
THR 6410.0059
ILE 6420.0070
GLY 6430.0063
MET 6440.0063
GLY 6450.0053
ASP 6460.0046
LEU 6470.0053
GLU 6480.0033
PHE 6490.0028
THR 6500.0047
GLU 6510.0073
ASN 6520.0107
TYR 6530.0106
ASP 6540.0120
PHE 6550.0108
LYS 6560.0052
ALA 6570.0081
VAL 6580.0107
PHE 6590.0072
ILE 6600.0072
ILE 6610.0104
LEU 6620.0085
LEU 6630.0074
LEU 6640.0092
ALA 6650.0066
TYR 6660.0061
VAL 6670.0062
ILE 6680.0039
LEU 6690.0024
THR 6700.0018
TYR 6710.0031
ILE 6720.0025
LEU 6730.0026
LEU 6740.0063
LEU 6750.0051
ASN 6760.0091
MET 6770.0166
LEU 6780.0136
ILE 6790.0151
ALA 6800.0222
LEU 6810.0194
MET 6820.0178
GLY 6830.0221
GLU 6840.0140
THR 6850.0106
VAL 6860.0203
ASN 6870.0263
LYS 6880.0205
ILE 6890.0197
ALA 6900.0242
GLN 6910.0263
GLU 6920.0199
SER 6930.0170
LYS 6940.0217
ASN 6950.0170
ILE 6960.0150
TRP 6970.0153
LYS 6980.0146
LEU 6990.0145
GLN 7000.0130
ARG 7010.0127
ALA 7020.0141
ILE 7030.0133
THR 7040.0100
ILE 7050.0109
LEU 7060.0136
ASP 7070.0123
THR 7080.0100
GLU 7090.0143
LYS 7100.0237
SER 7110.0267
PHE 7120.0273
LEU 7130.0750
LYS 7140.0621
CYS 7150.0707
MET 7160.0376
ARG 7170.0386
LYS 7180.0145
ALA 7190.0118
PHE 7200.0119
ARG 7210.0145
SER 7220.0198
GLY 7230.0176
LYS 7240.0284
LEU 7250.0387
LEU 7260.0398
TYR 7380.0179
ARG 7390.0098
TRP 7400.0080
CYS 7410.0119
PHE 7420.0126
ARG 7430.0149
VAL 7440.0135
ASP 7450.0145
GLU 7460.0146

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.