CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  TRANSPORT PROTEIN 17-DEC-20 7L2L  ***

<R2> analysis for 260127153226105187

---  normal mode 34  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0750
VAL 2830.0063
GLY 2840.0066
ASN 2850.0062
THR 2860.0062
VAL 2870.0052
LEU 2880.0047
HIS 2890.0040
ALA 2900.0035
LEU 2910.0031
VAL 2920.0029
GLU 2930.0025
VAL 2940.0025
ALA 2950.0018
ASP 2960.0019
ASN 2970.0042
THR 2980.0088
VAL 2990.0127
ASP 3000.0107
ASN 3010.0039
THR 3020.0048
LYS 3030.0054
PHE 3040.0021
VAL 3050.0023
THR 3060.0038
SER 3070.0028
MET 3080.0031
TYR 3090.0040
ASN 3100.0031
GLU 3110.0025
ILE 3120.0034
LEU 3130.0024
ILE 3140.0018
LEU 3150.0043
GLY 3160.0049
ALA 3170.0026
LYS 3180.0058
LEU 3190.0084
HIS 3200.0060
PRO 3210.0025
THR 3220.0025
LEU 3230.0047
LYS 3240.0053
LEU 3250.0057
GLU 3260.0059
GLU 3270.0076
ILE 3280.0072
THR 3290.0065
ASN 3300.0055
ARG 3310.0057
LYS 3320.0067
GLY 3330.0065
LEU 3340.0053
THR 3350.0051
PRO 3360.0044
LEU 3370.0040
ALA 3380.0041
LEU 3390.0037
ALA 3400.0037
ALA 3410.0035
SER 3420.0033
SER 3430.0033
GLY 3440.0034
LYS 3450.0034
ILE 3460.0040
GLY 3470.0040
VAL 3480.0042
LEU 3490.0040
ALA 3500.0040
TYR 3510.0044
ILE 3520.0033
LEU 3530.0024
GLN 3540.0037
ARG 3550.0041
GLU 3560.0034
ILE 3570.0020
HIS 3580.0026
GLU 3590.0088
PRO 3600.0137
GLU 3610.0078
CYS 3620.0045
ARG 3630.0031
HIS 3640.0024
LEU 3650.0008
SER 3660.0014
ARG 3670.0022
LYS 3680.0039
PHE 3690.0051
THR 3700.0079
GLU 3710.0058
TRP 3720.0037
ALA 3730.0072
TYR 3740.0113
GLY 3750.0178
PRO 3760.0182
VAL 3770.0104
HIS 3780.0064
SER 3790.0052
SER 3800.0060
LEU 3810.0064
TYR 3820.0037
ASP 3830.0030
LEU 3840.0026
SER 3850.0025
CYS 3860.0028
ILE 3870.0017
ASP 3880.0017
THR 3890.0034
CYS 3900.0041
GLU 3910.0065
LYS 3920.0056
ASN 3930.0043
SER 3940.0027
VAL 3950.0026
LEU 3960.0027
GLU 3970.0033
VAL 3980.0030
ILE 3990.0031
ALA 4000.0048
TYR 4010.0040
SER 4020.0019
SER 4030.0011
SER 4040.0018
GLU 4050.0019
THR 4060.0027
PRO 4070.0025
ASN 4080.0022
ARG 4090.0032
HIS 4100.0029
ASP 4110.0022
MET 4120.0021
LEU 4130.0013
LEU 4140.0015
VAL 4150.0029
GLU 4160.0034
PRO 4170.0027
LEU 4180.0015
ASN 4190.0022
ARG 4200.0032
LEU 4210.0023
LEU 4220.0017
GLN 4230.0027
ASP 4240.0032
LYS 4250.0020
TRP 4260.0014
ASP 4270.0044
ARG 4280.0051
PHE 4290.0047
VAL 4300.0021
LYS 4310.0015
ARG 4320.0029
ILE 4330.0041
PHE 4340.0034
TYR 4350.0020
PHE 4360.0024
ASN 4370.0040
PHE 4380.0039
PHE 4390.0029
VAL 4400.0025
TYR 4410.0035
CYS 4420.0031
LEU 4430.0018
TYR 4440.0011
MET 4450.0025
ILE 4460.0053
ILE 4470.0057
PHE 4480.0037
THR 4490.0045
ALA 4500.0064
ALA 4510.0055
ALA 4520.0036
TYR 4530.0047
TYR 4540.0048
ARG 4550.0037
PRO 4560.0034
VAL 4570.0023
GLU 4580.0027
GLY 4590.0028
LEU 4600.0034
PRO 4610.0037
PRO 4620.0041
TYR 4630.0075
LYS 4640.0109
LEU 4650.0068
LYS 4660.0104
ASN 4670.0109
THR 4680.0131
VAL 4690.0114
GLY 4700.0140
ASP 4710.0060
TYR 4720.0058
PHE 4730.0127
ARG 4740.0101
VAL 4750.0083
THR 4760.0124
GLY 4770.0100
GLU 4780.0068
ILE 4790.0090
LEU 4800.0077
SER 4810.0041
VAL 4820.0046
SER 4830.0045
GLY 4840.0020
GLY 4850.0023
VAL 4860.0033
TYR 4870.0039
PHE 4880.0042
PHE 4890.0045
PHE 4900.0058
ARG 4910.0069
GLY 4920.0072
ILE 4930.0082
GLN 4940.0108
TYR 4950.0108
PHE 4960.0111
LEU 4970.0141
GLN 4980.0165
ARG 4990.0151
ARG 5000.0152
PRO 5010.0125
SER 5020.0119
LEU 5030.0124
LYS 5040.0086
SER 5050.0028
LEU 5060.0042
PHE 5070.0030
VAL 5080.0041
ASP 5090.0054
SER 5100.0066
TYR 5110.0054
SER 5120.0061
GLU 5130.0061
ILE 5140.0046
LEU 5150.0042
PHE 5160.0051
PHE 5170.0043
VAL 5180.0028
GLN 5190.0025
SER 5200.0020
LEU 5210.0021
PHE 5220.0011
MET 5230.0022
LEU 5240.0023
VAL 5250.0020
SER 5260.0027
VAL 5270.0029
VAL 5280.0032
LEU 5290.0033
TYR 5300.0038
PHE 5310.0041
SER 5320.0040
GLN 5330.0036
ARG 5340.0036
LYS 5350.0030
GLU 5360.0031
TYR 5370.0033
VAL 5380.0030
ALA 5390.0028
SER 5400.0023
MET 5410.0023
VAL 5420.0032
PHE 5430.0028
SER 5440.0022
LEU 5450.0029
ALA 5460.0043
MET 5470.0042
GLY 5480.0030
TRP 5490.0050
THR 5500.0065
ASN 5510.0064
MET 5520.0064
LEU 5530.0077
TYR 5540.0076
TYR 5550.0070
THR 5560.0076
ARG 5570.0055
GLY 5580.0047
PHE 5590.0086
GLN 5600.0093
GLN 5610.0108
MET 5620.0119
GLY 5630.0078
ILE 5640.0087
TYR 5650.0086
ALA 5660.0074
VAL 5670.0029
MET 5680.0026
ILE 5690.0056
GLU 5700.0066
LYS 5710.0093
MET 5720.0102
ILE 5730.0097
LEU 5740.0094
ARG 5750.0100
ASP 5760.0116
LEU 5770.0073
CYS 5780.0211
ARG 5790.0254
PHE 5800.0157
MET 5810.0221
PHE 5820.0409
VAL 5830.0285
TYR 5840.0152
LEU 5850.0296
VAL 5860.0234
PHE 5870.0141
LEU 5880.0172
PHE 5890.0161
GLY 5900.0158
PHE 5910.0151
SER 5920.0127
THR 5930.0130
ALA 5940.0165
VAL 5950.0105
VAL 5960.0106
THR 5970.0227
LEU 5980.0247
ILE 5990.0216
GLU 6000.0401
ASP 6010.0601
SER 6260.0395
TYR 6270.0240
ASN 6280.0274
SER 6290.0094
LEU 6300.0072
TYR 6310.0065
SER 6320.0061
THR 6330.0063
CYS 6340.0141
LEU 6350.0135
GLU 6360.0132
LEU 6370.0164
PHE 6380.0178
LYS 6390.0182
PHE 6400.0160
THR 6410.0168
ILE 6420.0269
GLY 6430.0268
MET 6440.0214
GLY 6450.0158
ASP 6460.0209
LEU 6470.0302
GLU 6480.0300
PHE 6490.0256
THR 6500.0299
GLU 6510.0321
ASN 6520.0336
TYR 6530.0202
ASP 6540.0132
PHE 6550.0164
LYS 6560.0205
ALA 6570.0375
VAL 6580.0337
PHE 6590.0192
ILE 6600.0297
ILE 6610.0375
LEU 6620.0239
LEU 6630.0218
LEU 6640.0293
ALA 6650.0176
TYR 6660.0152
VAL 6670.0117
ILE 6680.0023
LEU 6690.0102
THR 6700.0049
TYR 6710.0162
ILE 6720.0240
LEU 6730.0284
LEU 6740.0316
LEU 6750.0383
ASN 6760.0602
MET 6770.0695
LEU 6780.0544
ILE 6790.0714
ALA 6800.0750
LEU 6810.0612
MET 6820.0479
GLY 6830.0279
GLU 6840.0266
THR 6850.0306
VAL 6860.0172
ASN 6870.0634
LYS 6880.0711
ILE 6890.0250
ALA 6900.0262
GLN 6910.0332
GLU 6920.0182
SER 6930.0074
LYS 6940.0149
ASN 6950.0061
ILE 6960.0034
TRP 6970.0040
LYS 6980.0029
LEU 6990.0016
GLN 7000.0031
ARG 7010.0036
ALA 7020.0031
ILE 7030.0037
THR 7040.0026
ILE 7050.0025
LEU 7060.0030
ASP 7070.0019
THR 7080.0011
GLU 7090.0020
LYS 7100.0069
SER 7110.0094
PHE 7120.0122
LEU 7130.0356
LYS 7140.0268
CYS 7150.0329
MET 7160.0248
ARG 7170.0261
LYS 7180.0109
ALA 7190.0025
PHE 7200.0012
ARG 7210.0010
SER 7220.0072
GLY 7230.0084
LYS 7240.0158
LEU 7250.0166
LEU 7260.0169
TYR 7380.0109
ARG 7390.0064
TRP 7400.0061
CYS 7410.0058
PHE 7420.0057
ARG 7430.0064
VAL 7440.0063
ASP 7450.0061
GLU 7460.0065

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.