CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  TRANSPORT PROTEIN 17-DEC-20 7L2L  ***

<R2> analysis for 260127153226105187

---  normal mode 48  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0839
VAL 2830.0293
GLY 2840.0328
ASN 2850.0276
THR 2860.0188
VAL 2870.0117
LEU 2880.0138
HIS 2890.0143
ALA 2900.0084
LEU 2910.0069
VAL 2920.0105
GLU 2930.0080
VAL 2940.0083
ALA 2950.0119
ASP 2960.0112
ASN 2970.0106
THR 2980.0172
VAL 2990.0165
ASP 3000.0247
ASN 3010.0178
THR 3020.0124
LYS 3030.0170
PHE 3040.0188
VAL 3050.0165
THR 3060.0174
SER 3070.0205
MET 3080.0188
TYR 3090.0185
ASN 3100.0208
GLU 3110.0194
ILE 3120.0128
LEU 3130.0150
ILE 3140.0146
LEU 3150.0115
GLY 3160.0107
ALA 3170.0081
LYS 3180.0099
LEU 3190.0205
HIS 3200.0258
PRO 3210.0237
THR 3220.0372
LEU 3230.0318
LYS 3240.0241
LEU 3250.0132
GLU 3260.0167
GLU 3270.0272
ILE 3280.0248
THR 3290.0265
ASN 3300.0243
ARG 3310.0269
LYS 3320.0327
GLY 3330.0252
LEU 3340.0218
THR 3350.0206
PRO 3360.0164
LEU 3370.0106
ALA 3380.0107
LEU 3390.0113
ALA 3400.0091
ALA 3410.0089
SER 3420.0091
SER 3430.0077
GLY 3440.0078
LYS 3450.0083
ILE 3460.0074
GLY 3470.0096
VAL 3480.0114
LEU 3490.0094
ALA 3500.0083
TYR 3510.0105
ILE 3520.0126
LEU 3530.0128
GLN 3540.0091
ARG 3550.0150
GLU 3560.0130
ILE 3570.0127
HIS 3580.0145
GLU 3590.0267
PRO 3600.0335
GLU 3610.0107
CYS 3620.0119
ARG 3630.0098
HIS 3640.0071
LEU 3650.0137
SER 3660.0132
ARG 3670.0217
LYS 3680.0217
PHE 3690.0210
THR 3700.0353
GLU 3710.0400
TRP 3720.0363
ALA 3730.0404
TYR 3740.0395
GLY 3750.0420
PRO 3760.0430
VAL 3770.0391
HIS 3780.0350
SER 3790.0297
SER 3800.0291
LEU 3810.0306
TYR 3820.0225
ASP 3830.0213
LEU 3840.0213
SER 3850.0199
CYS 3860.0179
ILE 3870.0139
ASP 3880.0143
THR 3890.0163
CYS 3900.0217
GLU 3910.0364
LYS 3920.0262
ASN 3930.0157
SER 3940.0079
VAL 3950.0071
LEU 3960.0066
GLU 3970.0086
VAL 3980.0075
ILE 3990.0069
ALA 4000.0091
TYR 4010.0074
SER 4020.0081
SER 4030.0077
SER 4040.0059
GLU 4050.0056
THR 4060.0067
PRO 4070.0062
ASN 4080.0074
ARG 4090.0065
HIS 4100.0070
ASP 4110.0067
MET 4120.0039
LEU 4130.0035
LEU 4140.0012
VAL 4150.0114
GLU 4160.0149
PRO 4170.0194
LEU 4180.0140
ASN 4190.0135
ARG 4200.0150
LEU 4210.0131
LEU 4220.0074
GLN 4230.0087
ASP 4240.0109
LYS 4250.0039
TRP 4260.0056
ASP 4270.0125
ARG 4280.0111
PHE 4290.0102
VAL 4300.0127
LYS 4310.0164
ARG 4320.0269
ILE 4330.0251
PHE 4340.0207
TYR 4350.0240
PHE 4360.0292
ASN 4370.0256
PHE 4380.0175
PHE 4390.0146
VAL 4400.0174
TYR 4410.0138
CYS 4420.0079
LEU 4430.0082
TYR 4440.0088
MET 4450.0086
ILE 4460.0070
ILE 4470.0055
PHE 4480.0032
THR 4490.0039
ALA 4500.0043
ALA 4510.0077
ALA 4520.0084
TYR 4530.0197
TYR 4540.0182
ARG 4550.0103
PRO 4560.0089
VAL 4570.0090
GLU 4580.0074
GLY 4590.0127
LEU 4600.0134
PRO 4610.0061
PRO 4620.0082
TYR 4630.0024
LYS 4640.0019
LEU 4650.0022
LYS 4660.0074
ASN 4670.0110
THR 4680.0131
VAL 4690.0092
GLY 4700.0107
ASP 4710.0070
TYR 4720.0030
PHE 4730.0047
ARG 4740.0103
VAL 4750.0111
THR 4760.0097
GLY 4770.0066
GLU 4780.0092
ILE 4790.0143
LEU 4800.0124
SER 4810.0046
VAL 4820.0089
SER 4830.0133
GLY 4840.0115
GLY 4850.0065
VAL 4860.0128
TYR 4870.0159
PHE 4880.0101
PHE 4890.0084
PHE 4900.0177
ARG 4910.0170
GLY 4920.0092
ILE 4930.0159
GLN 4940.0211
TYR 4950.0148
PHE 4960.0086
LEU 4970.0155
GLN 4980.0160
ARG 4990.0069
ARG 5000.0069
PRO 5010.0046
SER 5020.0061
LEU 5030.0039
LYS 5040.0067
SER 5050.0068
LEU 5060.0070
PHE 5070.0102
VAL 5080.0104
ASP 5090.0103
SER 5100.0100
TYR 5110.0127
SER 5120.0106
GLU 5130.0094
ILE 5140.0089
LEU 5150.0107
PHE 5160.0088
PHE 5170.0019
VAL 5180.0052
GLN 5190.0044
SER 5200.0033
LEU 5210.0064
PHE 5220.0057
MET 5230.0055
LEU 5240.0090
VAL 5250.0098
SER 5260.0079
VAL 5270.0067
VAL 5280.0057
LEU 5290.0040
TYR 5300.0030
PHE 5310.0061
SER 5320.0088
GLN 5330.0125
ARG 5340.0127
LYS 5350.0098
GLU 5360.0108
TYR 5370.0069
VAL 5380.0075
ALA 5390.0058
SER 5400.0053
MET 5410.0029
VAL 5420.0024
PHE 5430.0045
SER 5440.0025
LEU 5450.0048
ALA 5460.0087
MET 5470.0090
GLY 5480.0085
TRP 5490.0114
THR 5500.0109
ASN 5510.0118
MET 5520.0106
LEU 5530.0061
TYR 5540.0089
TYR 5550.0082
THR 5560.0041
ARG 5570.0048
GLY 5580.0093
PHE 5590.0119
GLN 5600.0142
GLN 5610.0179
MET 5620.0125
GLY 5630.0072
ILE 5640.0097
TYR 5650.0120
ALA 5660.0083
VAL 5670.0062
MET 5680.0088
ILE 5690.0128
GLU 5700.0128
LYS 5710.0120
MET 5720.0109
ILE 5730.0160
LEU 5740.0154
ARG 5750.0124
ASP 5760.0094
LEU 5770.0108
CYS 5780.0133
ARG 5790.0091
PHE 5800.0038
MET 5810.0065
PHE 5820.0057
VAL 5830.0045
TYR 5840.0043
LEU 5850.0074
VAL 5860.0081
PHE 5870.0061
LEU 5880.0050
PHE 5890.0061
GLY 5900.0070
PHE 5910.0052
SER 5920.0029
THR 5930.0031
ALA 5940.0041
VAL 5950.0028
VAL 5960.0030
THR 5970.0049
LEU 5980.0074
ILE 5990.0053
GLU 6000.0074
ASP 6010.0100
SER 6260.0076
TYR 6270.0052
ASN 6280.0066
SER 6290.0022
LEU 6300.0022
TYR 6310.0020
SER 6320.0003
THR 6330.0013
CYS 6340.0029
LEU 6350.0029
GLU 6360.0014
LEU 6370.0013
PHE 6380.0038
LYS 6390.0045
PHE 6400.0040
THR 6410.0063
ILE 6420.0110
GLY 6430.0119
MET 6440.0074
GLY 6450.0032
ASP 6460.0020
LEU 6470.0019
GLU 6480.0037
PHE 6490.0041
THR 6500.0053
GLU 6510.0058
ASN 6520.0022
TYR 6530.0030
ASP 6540.0090
PHE 6550.0133
LYS 6560.0112
ALA 6570.0121
VAL 6580.0091
PHE 6590.0028
ILE 6600.0033
ILE 6610.0013
LEU 6620.0026
LEU 6630.0030
LEU 6640.0039
ALA 6650.0093
TYR 6660.0059
VAL 6670.0060
ILE 6680.0109
LEU 6690.0078
THR 6700.0032
TYR 6710.0075
ILE 6720.0097
LEU 6730.0055
LEU 6740.0024
LEU 6750.0071
ASN 6760.0090
MET 6770.0110
LEU 6780.0083
ILE 6790.0129
ALA 6800.0165
LEU 6810.0139
MET 6820.0081
GLY 6830.0106
GLU 6840.0163
THR 6850.0140
VAL 6860.0132
ASN 6870.0193
LYS 6880.0187
ILE 6890.0136
ALA 6900.0144
GLN 6910.0147
GLU 6920.0114
SER 6930.0103
LYS 6940.0129
ASN 6950.0098
ILE 6960.0080
TRP 6970.0090
LYS 6980.0083
LEU 6990.0076
GLN 7000.0086
ARG 7010.0072
ALA 7020.0062
ILE 7030.0090
THR 7040.0109
ILE 7050.0079
LEU 7060.0107
ASP 7070.0164
THR 7080.0140
GLU 7090.0122
LYS 7100.0143
SER 7110.0164
PHE 7120.0119
LEU 7130.0092
LYS 7140.0301
CYS 7150.0396
MET 7160.0225
ARG 7170.0236
LYS 7180.0166
ALA 7190.0127
PHE 7200.0095
ARG 7210.0085
SER 7220.0107
GLY 7230.0070
LYS 7240.0356
LEU 7250.0564
LEU 7260.0839
TYR 7380.0377
ARG 7390.0184
TRP 7400.0030
CYS 7410.0197
PHE 7420.0212
ARG 7430.0218
VAL 7440.0291
ASP 7450.0292
GLU 7460.0265

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.