CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  TRANSPORT PROTEIN 17-DEC-20 7L2L  ***

<R2> analysis for 260127153226105187

---  normal mode 49  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0734
VAL 2830.0734
GLY 2840.0467
ASN 2850.0253
THR 2860.0056
VAL 2870.0072
LEU 2880.0090
HIS 2890.0104
ALA 2900.0143
LEU 2910.0147
VAL 2920.0099
GLU 2930.0118
VAL 2940.0168
ALA 2950.0100
ASP 2960.0196
ASN 2970.0183
THR 2980.0382
VAL 2990.0418
ASP 3000.0221
ASN 3010.0076
THR 3020.0180
LYS 3030.0302
PHE 3040.0252
VAL 3050.0188
THR 3060.0246
SER 3070.0335
MET 3080.0287
TYR 3090.0205
ASN 3100.0247
GLU 3110.0263
ILE 3120.0180
LEU 3130.0100
ILE 3140.0106
LEU 3150.0076
GLY 3160.0095
ALA 3170.0095
LYS 3180.0109
LEU 3190.0116
HIS 3200.0104
PRO 3210.0095
THR 3220.0123
LEU 3230.0129
LYS 3240.0127
LEU 3250.0089
GLU 3260.0109
GLU 3270.0126
ILE 3280.0133
THR 3290.0133
ASN 3300.0083
ARG 3310.0082
LYS 3320.0320
GLY 3330.0318
LEU 3340.0124
THR 3350.0103
PRO 3360.0083
LEU 3370.0050
ALA 3380.0066
LEU 3390.0073
ALA 3400.0057
ALA 3410.0059
SER 3420.0071
SER 3430.0059
GLY 3440.0066
LYS 3450.0053
ILE 3460.0047
GLY 3470.0031
VAL 3480.0042
LEU 3490.0046
ALA 3500.0074
TYR 3510.0091
ILE 3520.0065
LEU 3530.0063
GLN 3540.0070
ARG 3550.0114
GLU 3560.0086
ILE 3570.0091
HIS 3580.0102
GLU 3590.0222
PRO 3600.0247
GLU 3610.0024
CYS 3620.0081
ARG 3630.0036
HIS 3640.0094
LEU 3650.0119
SER 3660.0103
ARG 3670.0067
LYS 3680.0064
PHE 3690.0059
THR 3700.0064
GLU 3710.0047
TRP 3720.0040
ALA 3730.0155
TYR 3740.0092
GLY 3750.0123
PRO 3760.0143
VAL 3770.0126
HIS 3780.0085
SER 3790.0050
SER 3800.0049
LEU 3810.0045
TYR 3820.0041
ASP 3830.0040
LEU 3840.0043
SER 3850.0044
CYS 3860.0041
ILE 3870.0047
ASP 3880.0054
THR 3890.0029
CYS 3900.0036
GLU 3910.0024
LYS 3920.0058
ASN 3930.0066
SER 3940.0047
VAL 3950.0066
LEU 3960.0075
GLU 3970.0078
VAL 3980.0078
ILE 3990.0077
ALA 4000.0132
TYR 4010.0118
SER 4020.0113
SER 4030.0139
SER 4040.0094
GLU 4050.0142
THR 4060.0060
PRO 4070.0051
ASN 4080.0035
ARG 4090.0049
HIS 4100.0032
ASP 4110.0027
MET 4120.0035
LEU 4130.0036
LEU 4140.0035
VAL 4150.0017
GLU 4160.0018
PRO 4170.0027
LEU 4180.0044
ASN 4190.0050
ARG 4200.0047
LEU 4210.0060
LEU 4220.0069
GLN 4230.0070
ASP 4240.0077
LYS 4250.0090
TRP 4260.0066
ASP 4270.0075
ARG 4280.0099
PHE 4290.0120
VAL 4300.0121
LYS 4310.0073
ARG 4320.0128
ILE 4330.0172
PHE 4340.0114
TYR 4350.0139
PHE 4360.0259
ASN 4370.0200
PHE 4380.0160
PHE 4390.0298
VAL 4400.0269
TYR 4410.0151
CYS 4420.0200
LEU 4430.0203
TYR 4440.0121
MET 4450.0096
ILE 4460.0118
ILE 4470.0072
PHE 4480.0075
THR 4490.0046
ALA 4500.0074
ALA 4510.0133
ALA 4520.0059
TYR 4530.0181
TYR 4540.0207
ARG 4550.0124
PRO 4560.0087
VAL 4570.0091
GLU 4580.0068
GLY 4590.0103
LEU 4600.0079
PRO 4610.0078
PRO 4620.0084
TYR 4630.0025
LYS 4640.0097
LEU 4650.0116
LYS 4660.0204
ASN 4670.0298
THR 4680.0202
VAL 4690.0151
GLY 4700.0050
ASP 4710.0059
TYR 4720.0167
PHE 4730.0192
ARG 4740.0163
VAL 4750.0123
THR 4760.0107
GLY 4770.0093
GLU 4780.0086
ILE 4790.0115
LEU 4800.0089
SER 4810.0049
VAL 4820.0035
SER 4830.0062
GLY 4840.0083
GLY 4850.0060
VAL 4860.0088
TYR 4870.0135
PHE 4880.0113
PHE 4890.0123
PHE 4900.0216
ARG 4910.0215
GLY 4920.0160
ILE 4930.0235
GLN 4940.0294
TYR 4950.0230
PHE 4960.0171
LEU 4970.0236
GLN 4980.0267
ARG 4990.0178
ARG 5000.0144
PRO 5010.0142
SER 5020.0163
LEU 5030.0205
LYS 5040.0187
SER 5050.0082
LEU 5060.0077
PHE 5070.0074
VAL 5080.0067
ASP 5090.0070
SER 5100.0090
TYR 5110.0069
SER 5120.0095
GLU 5130.0091
ILE 5140.0069
LEU 5150.0068
PHE 5160.0052
PHE 5170.0091
VAL 5180.0079
GLN 5190.0073
SER 5200.0086
LEU 5210.0089
PHE 5220.0072
MET 5230.0050
LEU 5240.0058
VAL 5250.0054
SER 5260.0033
VAL 5270.0056
VAL 5280.0047
LEU 5290.0049
TYR 5300.0061
PHE 5310.0086
SER 5320.0081
GLN 5330.0087
ARG 5340.0067
LYS 5350.0057
GLU 5360.0040
TYR 5370.0042
VAL 5380.0043
ALA 5390.0036
SER 5400.0036
MET 5410.0035
VAL 5420.0036
PHE 5430.0051
SER 5440.0060
LEU 5450.0063
ALA 5460.0068
MET 5470.0097
GLY 5480.0089
TRP 5490.0109
THR 5500.0132
ASN 5510.0081
MET 5520.0096
LEU 5530.0056
TYR 5540.0030
TYR 5550.0033
THR 5560.0063
ARG 5570.0044
GLY 5580.0048
PHE 5590.0096
GLN 5600.0138
GLN 5610.0195
MET 5620.0173
GLY 5630.0112
ILE 5640.0103
TYR 5650.0144
ALA 5660.0114
VAL 5670.0051
MET 5680.0060
ILE 5690.0134
GLU 5700.0105
LYS 5710.0117
MET 5720.0158
ILE 5730.0258
LEU 5740.0200
ARG 5750.0207
ASP 5760.0249
LEU 5770.0369
CYS 5780.0442
ARG 5790.0316
PHE 5800.0211
MET 5810.0254
PHE 5820.0217
VAL 5830.0125
TYR 5840.0110
LEU 5850.0104
VAL 5860.0141
PHE 5870.0095
LEU 5880.0061
PHE 5890.0101
GLY 5900.0108
PHE 5910.0070
SER 5920.0078
THR 5930.0083
ALA 5940.0055
VAL 5950.0053
VAL 5960.0039
THR 5970.0077
LEU 5980.0142
ILE 5990.0119
GLU 6000.0234
ASP 6010.0412
SER 6260.0218
TYR 6270.0127
ASN 6280.0131
SER 6290.0037
LEU 6300.0110
TYR 6310.0184
SER 6320.0121
THR 6330.0082
CYS 6340.0129
LEU 6350.0147
GLU 6360.0105
LEU 6370.0080
PHE 6380.0124
LYS 6390.0175
PHE 6400.0155
THR 6410.0147
ILE 6420.0300
GLY 6430.0376
MET 6440.0331
GLY 6450.0173
ASP 6460.0112
LEU 6470.0166
GLU 6480.0187
PHE 6490.0140
THR 6500.0225
GLU 6510.0256
ASN 6520.0212
TYR 6530.0087
ASP 6540.0098
PHE 6550.0233
LYS 6560.0249
ALA 6570.0345
VAL 6580.0283
PHE 6590.0140
ILE 6600.0163
ILE 6610.0183
LEU 6620.0077
LEU 6630.0040
LEU 6640.0043
ALA 6650.0103
TYR 6660.0065
VAL 6670.0104
ILE 6680.0229
LEU 6690.0210
THR 6700.0144
TYR 6710.0146
ILE 6720.0269
LEU 6730.0325
LEU 6740.0198
LEU 6750.0176
ASN 6760.0231
MET 6770.0356
LEU 6780.0312
ILE 6790.0443
ALA 6800.0502
LEU 6810.0437
MET 6820.0419
GLY 6830.0368
GLU 6840.0175
THR 6850.0240
VAL 6860.0365
ASN 6870.0421
LYS 6880.0306
ILE 6890.0142
ALA 6900.0167
GLN 6910.0144
GLU 6920.0084
SER 6930.0060
LYS 6940.0077
ASN 6950.0056
ILE 6960.0047
TRP 6970.0062
LYS 6980.0049
LEU 6990.0060
GLN 7000.0054
ARG 7010.0064
ALA 7020.0099
ILE 7030.0105
THR 7040.0091
ILE 7050.0109
LEU 7060.0136
ASP 7070.0164
THR 7080.0150
GLU 7090.0160
LYS 7100.0167
SER 7110.0169
PHE 7120.0166
LEU 7130.0204
LYS 7140.0219
CYS 7150.0180
MET 7160.0091
ARG 7170.0091
LYS 7180.0132
ALA 7190.0086
PHE 7200.0076
ARG 7210.0068
SER 7220.0029
GLY 7230.0027
LYS 7240.0109
LEU 7250.0095
LEU 7260.0072
TYR 7380.0029
ARG 7390.0039
TRP 7400.0015
CYS 7410.0020
PHE 7420.0031
ARG 7430.0032
VAL 7440.0050
ASP 7450.0073
GLU 7460.0064

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.