CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  TRANSPORT PROTEIN 17-DEC-20 7L2L  ***

<R2> analysis for 260127153226105187

---  normal mode 54  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0761
VAL 2830.0495
GLY 2840.0443
ASN 2850.0195
THR 2860.0069
VAL 2870.0118
LEU 2880.0110
HIS 2890.0110
ALA 2900.0160
LEU 2910.0164
VAL 2920.0151
GLU 2930.0224
VAL 2940.0227
ALA 2950.0209
ASP 2960.0251
ASN 2970.0225
THR 2980.0142
VAL 2990.0234
ASP 3000.0296
ASN 3010.0164
THR 3020.0087
LYS 3030.0137
PHE 3040.0177
VAL 3050.0163
THR 3060.0088
SER 3070.0115
MET 3080.0149
TYR 3090.0120
ASN 3100.0058
GLU 3110.0102
ILE 3120.0117
LEU 3130.0056
ILE 3140.0023
LEU 3150.0068
GLY 3160.0055
ALA 3170.0048
LYS 3180.0122
LEU 3190.0186
HIS 3200.0108
PRO 3210.0090
THR 3220.0054
LEU 3230.0032
LYS 3240.0046
LEU 3250.0067
GLU 3260.0080
GLU 3270.0059
ILE 3280.0040
THR 3290.0107
ASN 3300.0100
ARG 3310.0231
LYS 3320.0297
GLY 3330.0218
LEU 3340.0145
THR 3350.0124
PRO 3360.0103
LEU 3370.0065
ALA 3380.0084
LEU 3390.0102
ALA 3400.0102
ALA 3410.0104
SER 3420.0067
SER 3430.0145
GLY 3440.0168
LYS 3450.0168
ILE 3460.0156
GLY 3470.0146
VAL 3480.0139
LEU 3490.0130
ALA 3500.0133
TYR 3510.0125
ILE 3520.0135
LEU 3530.0135
GLN 3540.0131
ARG 3550.0208
GLU 3560.0205
ILE 3570.0198
HIS 3580.0311
GLU 3590.0219
PRO 3600.0181
GLU 3610.0185
CYS 3620.0146
ARG 3630.0154
HIS 3640.0177
LEU 3650.0140
SER 3660.0186
ARG 3670.0171
LYS 3680.0172
PHE 3690.0183
THR 3700.0219
GLU 3710.0261
TRP 3720.0206
ALA 3730.0137
TYR 3740.0259
GLY 3750.0218
PRO 3760.0198
VAL 3770.0244
HIS 3780.0179
SER 3790.0145
SER 3800.0148
LEU 3810.0154
TYR 3820.0071
ASP 3830.0068
LEU 3840.0107
SER 3850.0089
CYS 3860.0085
ILE 3870.0093
ASP 3880.0142
THR 3890.0150
CYS 3900.0159
GLU 3910.0220
LYS 3920.0195
ASN 3930.0151
SER 3940.0094
VAL 3950.0081
LEU 3960.0081
GLU 3970.0096
VAL 3980.0087
ILE 3990.0077
ALA 4000.0093
TYR 4010.0101
SER 4020.0100
SER 4030.0198
SER 4040.0226
GLU 4050.0342
THR 4060.0102
PRO 4070.0119
ASN 4080.0117
ARG 4090.0088
HIS 4100.0078
ASP 4110.0085
MET 4120.0073
LEU 4130.0067
LEU 4140.0064
VAL 4150.0083
GLU 4160.0078
PRO 4170.0081
LEU 4180.0056
ASN 4190.0050
ARG 4200.0032
LEU 4210.0112
LEU 4220.0119
GLN 4230.0132
ASP 4240.0163
LYS 4250.0180
TRP 4260.0172
ASP 4270.0183
ARG 4280.0189
PHE 4290.0197
VAL 4300.0173
LYS 4310.0217
ARG 4320.0221
ILE 4330.0183
PHE 4340.0171
TYR 4350.0195
PHE 4360.0207
ASN 4370.0140
PHE 4380.0130
PHE 4390.0165
VAL 4400.0169
TYR 4410.0090
CYS 4420.0047
LEU 4430.0100
TYR 4440.0112
MET 4450.0088
ILE 4460.0101
ILE 4470.0113
PHE 4480.0092
THR 4490.0095
ALA 4500.0088
ALA 4510.0095
ALA 4520.0072
TYR 4530.0130
TYR 4540.0142
ARG 4550.0105
PRO 4560.0101
VAL 4570.0184
GLU 4580.0143
GLY 4590.0113
LEU 4600.0097
PRO 4610.0079
PRO 4620.0057
TYR 4630.0110
LYS 4640.0119
LEU 4650.0132
LYS 4660.0146
ASN 4670.0163
THR 4680.0115
VAL 4690.0096
GLY 4700.0076
ASP 4710.0090
TYR 4720.0097
PHE 4730.0081
ARG 4740.0102
VAL 4750.0081
THR 4760.0054
GLY 4770.0092
GLU 4780.0062
ILE 4790.0049
LEU 4800.0068
SER 4810.0074
VAL 4820.0055
SER 4830.0091
GLY 4840.0122
GLY 4850.0102
VAL 4860.0167
TYR 4870.0227
PHE 4880.0182
PHE 4890.0185
PHE 4900.0333
ARG 4910.0329
GLY 4920.0243
ILE 4930.0312
GLN 4940.0375
TYR 4950.0272
PHE 4960.0080
LEU 4970.0154
GLN 4980.0160
ARG 4990.0247
ARG 5000.0313
PRO 5010.0368
SER 5020.0761
LEU 5030.0559
LYS 5040.0337
SER 5050.0215
LEU 5060.0138
PHE 5070.0236
VAL 5080.0254
ASP 5090.0205
SER 5100.0177
TYR 5110.0175
SER 5120.0175
GLU 5130.0161
ILE 5140.0150
LEU 5150.0148
PHE 5160.0145
PHE 5170.0114
VAL 5180.0107
GLN 5190.0102
SER 5200.0092
LEU 5210.0090
PHE 5220.0083
MET 5230.0058
LEU 5240.0059
VAL 5250.0045
SER 5260.0023
VAL 5270.0013
VAL 5280.0041
LEU 5290.0066
TYR 5300.0042
PHE 5310.0039
SER 5320.0098
GLN 5330.0090
ARG 5340.0139
LYS 5350.0137
GLU 5360.0129
TYR 5370.0070
VAL 5380.0060
ALA 5390.0017
SER 5400.0020
MET 5410.0049
VAL 5420.0099
PHE 5430.0103
SER 5440.0092
LEU 5450.0098
ALA 5460.0102
MET 5470.0100
GLY 5480.0091
TRP 5490.0080
THR 5500.0086
ASN 5510.0071
MET 5520.0050
LEU 5530.0102
TYR 5540.0101
TYR 5550.0109
THR 5560.0145
ARG 5570.0118
GLY 5580.0125
PHE 5590.0158
GLN 5600.0144
GLN 5610.0188
MET 5620.0190
GLY 5630.0147
ILE 5640.0139
TYR 5650.0154
ALA 5660.0131
VAL 5670.0073
MET 5680.0061
ILE 5690.0089
GLU 5700.0145
LYS 5710.0104
MET 5720.0081
ILE 5730.0116
LEU 5740.0149
ARG 5750.0120
ASP 5760.0065
LEU 5770.0047
CYS 5780.0048
ARG 5790.0083
PHE 5800.0078
MET 5810.0076
PHE 5820.0094
VAL 5830.0063
TYR 5840.0050
LEU 5850.0055
VAL 5860.0018
PHE 5870.0007
LEU 5880.0012
PHE 5890.0041
GLY 5900.0041
PHE 5910.0029
SER 5920.0032
THR 5930.0040
ALA 5940.0038
VAL 5950.0034
VAL 5960.0042
THR 5970.0033
LEU 5980.0042
ILE 5990.0053
GLU 6000.0064
ASP 6010.0092
SER 6260.0085
TYR 6270.0073
ASN 6280.0074
SER 6290.0070
LEU 6300.0055
TYR 6310.0091
SER 6320.0058
THR 6330.0042
CYS 6340.0051
LEU 6350.0026
GLU 6360.0021
LEU 6370.0021
PHE 6380.0015
LYS 6390.0015
PHE 6400.0024
THR 6410.0031
ILE 6420.0035
GLY 6430.0045
MET 6440.0031
GLY 6450.0025
ASP 6460.0029
LEU 6470.0043
GLU 6480.0043
PHE 6490.0042
THR 6500.0060
GLU 6510.0052
ASN 6520.0055
TYR 6530.0051
ASP 6540.0053
PHE 6550.0052
LYS 6560.0044
ALA 6570.0044
VAL 6580.0044
PHE 6590.0041
ILE 6600.0040
ILE 6610.0042
LEU 6620.0032
LEU 6630.0029
LEU 6640.0030
ALA 6650.0017
TYR 6660.0015
VAL 6670.0024
ILE 6680.0030
LEU 6690.0030
THR 6700.0044
TYR 6710.0061
ILE 6720.0056
LEU 6730.0065
LEU 6740.0094
LEU 6750.0087
ASN 6760.0095
MET 6770.0152
LEU 6780.0125
ILE 6790.0123
ALA 6800.0184
LEU 6810.0176
MET 6820.0149
GLY 6830.0223
GLU 6840.0238
THR 6850.0169
VAL 6860.0168
ASN 6870.0230
LYS 6880.0175
ILE 6890.0159
ALA 6900.0155
GLN 6910.0160
GLU 6920.0085
SER 6930.0042
LYS 6940.0054
ASN 6950.0027
ILE 6960.0033
TRP 6970.0061
LYS 6980.0046
LEU 6990.0051
GLN 7000.0085
ARG 7010.0102
ALA 7020.0118
ILE 7030.0116
THR 7040.0128
ILE 7050.0136
LEU 7060.0148
ASP 7070.0177
THR 7080.0150
GLU 7090.0183
LYS 7100.0179
SER 7110.0155
PHE 7120.0148
LEU 7130.0205
LYS 7140.0070
CYS 7150.0226
MET 7160.0053
ARG 7170.0112
LYS 7180.0245
ALA 7190.0249
PHE 7200.0230
ARG 7210.0207
SER 7220.0165
GLY 7230.0111
LYS 7240.0124
LEU 7250.0145
LEU 7260.0614
TYR 7380.0174
ARG 7390.0161
TRP 7400.0136
CYS 7410.0062
PHE 7420.0043
ARG 7430.0048
VAL 7440.0088
ASP 7450.0125
GLU 7460.0137

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.