CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  TRANSPORT PROTEIN 17-DEC-20 7L2L  ***

<R2> analysis for 260127153226105187

---  normal mode 55  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.1129
VAL 2830.0206
GLY 2840.0192
ASN 2850.0112
THR 2860.0078
VAL 2870.0080
LEU 2880.0085
HIS 2890.0078
ALA 2900.0084
LEU 2910.0092
VAL 2920.0091
GLU 2930.0091
VAL 2940.0122
ALA 2950.0130
ASP 2960.0136
ASN 2970.0108
THR 2980.0145
VAL 2990.0127
ASP 3000.0149
ASN 3010.0129
THR 3020.0110
LYS 3030.0122
PHE 3040.0115
VAL 3050.0107
THR 3060.0088
SER 3070.0096
MET 3080.0109
TYR 3090.0085
ASN 3100.0084
GLU 3110.0097
ILE 3120.0048
LEU 3130.0026
ILE 3140.0043
LEU 3150.0023
GLY 3160.0080
ALA 3170.0075
LYS 3180.0101
LEU 3190.0211
HIS 3200.0234
PRO 3210.0198
THR 3220.0217
LEU 3230.0160
LYS 3240.0086
LEU 3250.0036
GLU 3260.0040
GLU 3270.0055
ILE 3280.0087
THR 3290.0100
ASN 3300.0085
ARG 3310.0090
LYS 3320.0101
GLY 3330.0125
LEU 3340.0083
THR 3350.0084
PRO 3360.0073
LEU 3370.0051
ALA 3380.0069
LEU 3390.0074
ALA 3400.0068
ALA 3410.0067
SER 3420.0090
SER 3430.0105
GLY 3440.0094
LYS 3450.0078
ILE 3460.0071
GLY 3470.0060
VAL 3480.0047
LEU 3490.0030
ALA 3500.0041
TYR 3510.0036
ILE 3520.0055
LEU 3530.0065
GLN 3540.0088
ARG 3550.0106
GLU 3560.0113
ILE 3570.0120
HIS 3580.0052
GLU 3590.0025
PRO 3600.0058
GLU 3610.0081
CYS 3620.0051
ARG 3630.0068
HIS 3640.0089
LEU 3650.0107
SER 3660.0128
ARG 3670.0132
LYS 3680.0117
PHE 3690.0130
THR 3700.0180
GLU 3710.0237
TRP 3720.0183
ALA 3730.0199
TYR 3740.0268
GLY 3750.0362
PRO 3760.0200
VAL 3770.0151
HIS 3780.0101
SER 3790.0170
SER 3800.0144
LEU 3810.0123
TYR 3820.0084
ASP 3830.0112
LEU 3840.0113
SER 3850.0170
CYS 3860.0110
ILE 3870.0070
ASP 3880.0103
THR 3890.0134
CYS 3900.0139
GLU 3910.0127
LYS 3920.0104
ASN 3930.0091
SER 3940.0048
VAL 3950.0038
LEU 3960.0050
GLU 3970.0066
VAL 3980.0058
ILE 3990.0058
ALA 4000.0051
TYR 4010.0075
SER 4020.0092
SER 4030.0208
SER 4040.0158
GLU 4050.0286
THR 4060.0127
PRO 4070.0122
ASN 4080.0082
ARG 4090.0053
HIS 4100.0065
ASP 4110.0065
MET 4120.0041
LEU 4130.0039
LEU 4140.0055
VAL 4150.0059
GLU 4160.0082
PRO 4170.0062
LEU 4180.0019
ASN 4190.0045
ARG 4200.0038
LEU 4210.0028
LEU 4220.0033
GLN 4230.0061
ASP 4240.0101
LYS 4250.0072
TRP 4260.0089
ASP 4270.0154
ARG 4280.0138
PHE 4290.0099
VAL 4300.0085
LYS 4310.0123
ARG 4320.0126
ILE 4330.0117
PHE 4340.0115
TYR 4350.0133
PHE 4360.0179
ASN 4370.0149
PHE 4380.0107
PHE 4390.0123
VAL 4400.0093
TYR 4410.0055
CYS 4420.0063
LEU 4430.0051
TYR 4440.0044
MET 4450.0069
ILE 4460.0080
ILE 4470.0081
PHE 4480.0111
THR 4490.0095
ALA 4500.0103
ALA 4510.0091
ALA 4520.0074
TYR 4530.0096
TYR 4540.0118
ARG 4550.0094
PRO 4560.0090
VAL 4570.0143
GLU 4580.0134
GLY 4590.0132
LEU 4600.0179
PRO 4610.0124
PRO 4620.0153
TYR 4630.0088
LYS 4640.0039
LEU 4650.0087
LYS 4660.0142
ASN 4670.0227
THR 4680.0207
VAL 4690.0214
GLY 4700.0149
ASP 4710.0114
TYR 4720.0169
PHE 4730.0180
ARG 4740.0135
VAL 4750.0106
THR 4760.0083
GLY 4770.0060
GLU 4780.0060
ILE 4790.0047
LEU 4800.0056
SER 4810.0070
VAL 4820.0085
SER 4830.0102
GLY 4840.0090
GLY 4850.0085
VAL 4860.0085
TYR 4870.0080
PHE 4880.0075
PHE 4890.0076
PHE 4900.0119
ARG 4910.0135
GLY 4920.0109
ILE 4930.0120
GLN 4940.0154
TYR 4950.0115
PHE 4960.0050
LEU 4970.0083
GLN 4980.0049
ARG 4990.0089
ARG 5000.0142
PRO 5010.0160
SER 5020.0392
LEU 5030.0273
LYS 5040.0153
SER 5050.0095
LEU 5060.0025
PHE 5070.0103
VAL 5080.0105
ASP 5090.0063
SER 5100.0042
TYR 5110.0070
SER 5120.0066
GLU 5130.0067
ILE 5140.0078
LEU 5150.0072
PHE 5160.0066
PHE 5170.0071
VAL 5180.0089
GLN 5190.0086
SER 5200.0092
LEU 5210.0116
PHE 5220.0132
MET 5230.0119
LEU 5240.0140
VAL 5250.0139
SER 5260.0140
VAL 5270.0167
VAL 5280.0163
LEU 5290.0080
TYR 5300.0057
PHE 5310.0054
SER 5320.0064
GLN 5330.0111
ARG 5340.0129
LYS 5350.0078
GLU 5360.0076
TYR 5370.0060
VAL 5380.0068
ALA 5390.0080
SER 5400.0121
MET 5410.0110
VAL 5420.0120
PHE 5430.0127
SER 5440.0111
LEU 5450.0105
ALA 5460.0091
MET 5470.0082
GLY 5480.0082
TRP 5490.0076
THR 5500.0044
ASN 5510.0029
MET 5520.0034
LEU 5530.0034
TYR 5540.0034
TYR 5550.0045
THR 5560.0066
ARG 5570.0063
GLY 5580.0082
PHE 5590.0112
GLN 5600.0150
GLN 5610.0183
MET 5620.0168
GLY 5630.0120
ILE 5640.0154
TYR 5650.0171
ALA 5660.0104
VAL 5670.0062
MET 5680.0063
ILE 5690.0063
GLU 5700.0038
LYS 5710.0024
MET 5720.0028
ILE 5730.0069
LEU 5740.0085
ARG 5750.0070
ASP 5760.0043
LEU 5770.0038
CYS 5780.0035
ARG 5790.0016
PHE 5800.0039
MET 5810.0055
PHE 5820.0071
VAL 5830.0058
TYR 5840.0047
LEU 5850.0053
VAL 5860.0035
PHE 5870.0029
LEU 5880.0015
PHE 5890.0011
GLY 5900.0024
PHE 5910.0023
SER 5920.0027
THR 5930.0036
ALA 5940.0030
VAL 5950.0022
VAL 5960.0024
THR 5970.0026
LEU 5980.0023
ILE 5990.0013
GLU 6000.0032
ASP 6010.0059
SER 6260.0055
TYR 6270.0034
ASN 6280.0026
SER 6290.0038
LEU 6300.0045
TYR 6310.0061
SER 6320.0035
THR 6330.0024
CYS 6340.0030
LEU 6350.0016
GLU 6360.0016
LEU 6370.0012
PHE 6380.0020
LYS 6390.0031
PHE 6400.0020
THR 6410.0036
ILE 6420.0051
GLY 6430.0041
MET 6440.0039
GLY 6450.0023
ASP 6460.0038
LEU 6470.0032
GLU 6480.0024
PHE 6490.0024
THR 6500.0027
GLU 6510.0034
ASN 6520.0039
TYR 6530.0034
ASP 6540.0046
PHE 6550.0043
LYS 6560.0005
ALA 6570.0025
VAL 6580.0030
PHE 6590.0019
ILE 6600.0031
ILE 6610.0037
LEU 6620.0026
LEU 6630.0026
LEU 6640.0030
ALA 6650.0020
TYR 6660.0011
VAL 6670.0003
ILE 6680.0021
LEU 6690.0033
THR 6700.0032
TYR 6710.0030
ILE 6720.0032
LEU 6730.0038
LEU 6740.0045
LEU 6750.0039
ASN 6760.0031
MET 6770.0027
LEU 6780.0009
ILE 6790.0019
ALA 6800.0046
LEU 6810.0034
MET 6820.0038
GLY 6830.0128
GLU 6840.0088
THR 6850.0032
VAL 6860.0088
ASN 6870.0058
LYS 6880.0062
ILE 6890.0120
ALA 6900.0137
GLN 6910.0160
GLU 6920.0113
SER 6930.0104
LYS 6940.0139
ASN 6950.0087
ILE 6960.0083
TRP 6970.0090
LYS 6980.0074
LEU 6990.0076
GLN 7000.0080
ARG 7010.0081
ALA 7020.0081
ILE 7030.0076
THR 7040.0087
ILE 7050.0071
LEU 7060.0061
ASP 7070.0092
THR 7080.0089
GLU 7090.0051
LYS 7100.0063
SER 7110.0151
PHE 7120.0155
LEU 7130.0677
LYS 7140.0268
CYS 7150.0615
MET 7160.0162
ARG 7170.0423
LYS 7180.0197
ALA 7190.0228
PHE 7200.0191
ARG 7210.0160
SER 7220.0364
GLY 7230.0142
LYS 7240.0634
LEU 7250.0224
LEU 7260.1129
TYR 7380.0298
ARG 7390.0302
TRP 7400.0221
CYS 7410.0053
PHE 7420.0067
ARG 7430.0109
VAL 7440.0128
ASP 7450.0154
GLU 7460.0145

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.