CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  TRANSPORT PROTEIN 17-DEC-20 7L2L  ***

<R2> analysis for 260127153226105187

---  normal mode 56  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0719
VAL 2830.0466
GLY 2840.0401
ASN 2850.0197
THR 2860.0119
VAL 2870.0124
LEU 2880.0065
HIS 2890.0051
ALA 2900.0118
LEU 2910.0091
VAL 2920.0075
GLU 2930.0173
VAL 2940.0190
ALA 2950.0142
ASP 2960.0194
ASN 2970.0170
THR 2980.0208
VAL 2990.0116
ASP 3000.0105
ASN 3010.0085
THR 3020.0050
LYS 3030.0175
PHE 3040.0161
VAL 3050.0085
THR 3060.0134
SER 3070.0216
MET 3080.0179
TYR 3090.0122
ASN 3100.0228
GLU 3110.0259
ILE 3120.0189
LEU 3130.0148
ILE 3140.0231
LEU 3150.0231
GLY 3160.0198
ALA 3170.0147
LYS 3180.0140
LEU 3190.0194
HIS 3200.0229
PRO 3210.0122
THR 3220.0154
LEU 3230.0152
LYS 3240.0127
LEU 3250.0117
GLU 3260.0118
GLU 3270.0119
ILE 3280.0164
THR 3290.0163
ASN 3300.0146
ARG 3310.0240
LYS 3320.0217
GLY 3330.0212
LEU 3340.0119
THR 3350.0102
PRO 3360.0093
LEU 3370.0087
ALA 3380.0100
LEU 3390.0094
ALA 3400.0112
ALA 3410.0105
SER 3420.0125
SER 3430.0136
GLY 3440.0145
LYS 3450.0116
ILE 3460.0084
GLY 3470.0059
VAL 3480.0062
LEU 3490.0077
ALA 3500.0084
TYR 3510.0068
ILE 3520.0067
LEU 3530.0062
GLN 3540.0064
ARG 3550.0044
GLU 3560.0048
ILE 3570.0033
HIS 3580.0164
GLU 3590.0108
PRO 3600.0150
GLU 3610.0127
CYS 3620.0101
ARG 3630.0125
HIS 3640.0104
LEU 3650.0089
SER 3660.0051
ARG 3670.0035
LYS 3680.0035
PHE 3690.0062
THR 3700.0147
GLU 3710.0176
TRP 3720.0131
ALA 3730.0166
TYR 3740.0127
GLY 3750.0177
PRO 3760.0070
VAL 3770.0124
HIS 3780.0132
SER 3790.0129
SER 3800.0111
LEU 3810.0109
TYR 3820.0085
ASP 3830.0112
LEU 3840.0136
SER 3850.0110
CYS 3860.0131
ILE 3870.0118
ASP 3880.0120
THR 3890.0146
CYS 3900.0171
GLU 3910.0290
LYS 3920.0175
ASN 3930.0159
SER 3940.0120
VAL 3950.0108
LEU 3960.0113
GLU 3970.0101
VAL 3980.0084
ILE 3990.0075
ALA 4000.0091
TYR 4010.0099
SER 4020.0078
SER 4030.0226
SER 4040.0233
GLU 4050.0398
THR 4060.0138
PRO 4070.0134
ASN 4080.0101
ARG 4090.0081
HIS 4100.0085
ASP 4110.0079
MET 4120.0033
LEU 4130.0050
LEU 4140.0053
VAL 4150.0076
GLU 4160.0094
PRO 4170.0105
LEU 4180.0107
ASN 4190.0104
ARG 4200.0124
LEU 4210.0113
LEU 4220.0135
GLN 4230.0135
ASP 4240.0131
LYS 4250.0126
TRP 4260.0149
ASP 4270.0161
ARG 4280.0133
PHE 4290.0130
VAL 4300.0140
LYS 4310.0188
ARG 4320.0171
ILE 4330.0130
PHE 4340.0140
TYR 4350.0144
PHE 4360.0157
ASN 4370.0140
PHE 4380.0144
PHE 4390.0203
VAL 4400.0191
TYR 4410.0137
CYS 4420.0181
LEU 4430.0176
TYR 4440.0123
MET 4450.0123
ILE 4460.0143
ILE 4470.0089
PHE 4480.0080
THR 4490.0099
ALA 4500.0061
ALA 4510.0076
ALA 4520.0076
TYR 4530.0170
TYR 4540.0157
ARG 4550.0106
PRO 4560.0102
VAL 4570.0129
GLU 4580.0152
GLY 4590.0236
LEU 4600.0242
PRO 4610.0237
PRO 4620.0302
TYR 4630.0102
LYS 4640.0175
LEU 4650.0210
LYS 4660.0296
ASN 4670.0343
THR 4680.0226
VAL 4690.0301
GLY 4700.0365
ASP 4710.0247
TYR 4720.0236
PHE 4730.0312
ARG 4740.0258
VAL 4750.0161
THR 4760.0114
GLY 4770.0126
GLU 4780.0114
ILE 4790.0066
LEU 4800.0061
SER 4810.0111
VAL 4820.0151
SER 4830.0169
GLY 4840.0140
GLY 4850.0095
VAL 4860.0135
TYR 4870.0164
PHE 4880.0119
PHE 4890.0082
PHE 4900.0145
ARG 4910.0187
GLY 4920.0168
ILE 4930.0144
GLN 4940.0177
TYR 4950.0200
PHE 4960.0155
LEU 4970.0123
GLN 4980.0161
ARG 4990.0123
ARG 5000.0092
PRO 5010.0198
SER 5020.0520
LEU 5030.0356
LYS 5040.0719
SER 5050.0318
LEU 5060.0265
PHE 5070.0313
VAL 5080.0352
ASP 5090.0269
SER 5100.0262
TYR 5110.0190
SER 5120.0199
GLU 5130.0178
ILE 5140.0195
LEU 5150.0143
PHE 5160.0127
PHE 5170.0104
VAL 5180.0101
GLN 5190.0049
SER 5200.0041
LEU 5210.0088
PHE 5220.0144
MET 5230.0125
LEU 5240.0173
VAL 5250.0240
SER 5260.0224
VAL 5270.0273
VAL 5280.0308
LEU 5290.0193
TYR 5300.0203
PHE 5310.0266
SER 5320.0250
GLN 5330.0194
ARG 5340.0075
LYS 5350.0066
GLU 5360.0099
TYR 5370.0149
VAL 5380.0134
ALA 5390.0145
SER 5400.0182
MET 5410.0135
VAL 5420.0153
PHE 5430.0137
SER 5440.0084
LEU 5450.0096
ALA 5460.0087
MET 5470.0082
GLY 5480.0080
TRP 5490.0108
THR 5500.0128
ASN 5510.0082
MET 5520.0100
LEU 5530.0160
TYR 5540.0103
TYR 5550.0102
THR 5560.0139
ARG 5570.0095
GLY 5580.0075
PHE 5590.0142
GLN 5600.0169
GLN 5610.0276
MET 5620.0251
GLY 5630.0167
ILE 5640.0171
TYR 5650.0201
ALA 5660.0137
VAL 5670.0069
MET 5680.0087
ILE 5690.0108
GLU 5700.0076
LYS 5710.0069
MET 5720.0083
ILE 5730.0092
LEU 5740.0062
ARG 5750.0093
ASP 5760.0093
LEU 5770.0075
CYS 5780.0084
ARG 5790.0120
PHE 5800.0132
MET 5810.0128
PHE 5820.0136
VAL 5830.0115
TYR 5840.0099
LEU 5850.0119
VAL 5860.0102
PHE 5870.0068
LEU 5880.0064
PHE 5890.0092
GLY 5900.0101
PHE 5910.0071
SER 5920.0039
THR 5930.0051
ALA 5940.0055
VAL 5950.0026
VAL 5960.0041
THR 5970.0045
LEU 5980.0068
ILE 5990.0049
GLU 6000.0073
ASP 6010.0082
SER 6260.0067
TYR 6270.0063
ASN 6280.0075
SER 6290.0077
LEU 6300.0040
TYR 6310.0068
SER 6320.0051
THR 6330.0035
CYS 6340.0036
LEU 6350.0026
GLU 6360.0028
LEU 6370.0028
PHE 6380.0015
LYS 6390.0025
PHE 6400.0032
THR 6410.0051
ILE 6420.0082
GLY 6430.0095
MET 6440.0043
GLY 6450.0033
ASP 6460.0049
LEU 6470.0054
GLU 6480.0033
PHE 6490.0037
THR 6500.0045
GLU 6510.0075
ASN 6520.0050
TYR 6530.0074
ASP 6540.0141
PHE 6550.0147
LYS 6560.0086
ALA 6570.0042
VAL 6580.0056
PHE 6590.0037
ILE 6600.0057
ILE 6610.0084
LEU 6620.0079
LEU 6630.0072
LEU 6640.0087
ALA 6650.0092
TYR 6660.0057
VAL 6670.0049
ILE 6680.0060
LEU 6690.0027
THR 6700.0031
TYR 6710.0054
ILE 6720.0073
LEU 6730.0051
LEU 6740.0081
LEU 6750.0100
ASN 6760.0102
MET 6770.0112
LEU 6780.0092
ILE 6790.0083
ALA 6800.0050
LEU 6810.0044
MET 6820.0053
GLY 6830.0071
GLU 6840.0074
THR 6850.0050
VAL 6860.0033
ASN 6870.0030
LYS 6880.0031
ILE 6890.0036
ALA 6900.0082
GLN 6910.0123
GLU 6920.0070
SER 6930.0029
LYS 6940.0101
ASN 6950.0049
ILE 6960.0020
TRP 6970.0045
LYS 6980.0022
LEU 6990.0038
GLN 7000.0062
ARG 7010.0104
ALA 7020.0100
ILE 7030.0109
THR 7040.0147
ILE 7050.0128
LEU 7060.0125
ASP 7070.0135
THR 7080.0119
GLU 7090.0101
LYS 7100.0116
SER 7110.0083
PHE 7120.0089
LEU 7130.0413
LYS 7140.0177
CYS 7150.0338
MET 7160.0101
ARG 7170.0147
LYS 7180.0090
ALA 7190.0063
PHE 7200.0064
ARG 7210.0063
SER 7220.0099
GLY 7230.0090
LYS 7240.0179
LEU 7250.0139
LEU 7260.0523
TYR 7380.0150
ARG 7390.0146
TRP 7400.0132
CYS 7410.0133
PHE 7420.0127
ARG 7430.0123
VAL 7440.0126
ASP 7450.0156
GLU 7460.0164

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.